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The map label for this gene is cdtC

Identifier: 57237085

GI number: 57237085

Start: 87894

End: 88463

Strand: Reverse

Name: cdtC

Synonym: CJE0073

Alternate gene names: NA

Gene position: 88463-87894 (Counterclockwise)

Preceding gene: 57237086

Following gene: 57237084

Centisome position: 4.98

GC content: 31.05

Gene sequence:

>570_bases
ATGAAAAAAATTATTACTTTGTTTTTTATGTTTATAACTTTAGCCTTTGCAACTCCTACTGGAGATTTGAAAGATTTTAC
CGAAATGGTTTCTATAAGAAGCTTAGAAACGGGAATTTTTTTAAGCGCTTTTAGGGATACCTCAAAAGATCCTATTGATC
AAAATTGGAATATTAAAGAAATTGTTTTAAGCGATGAGTTAAAACAAAAAGATAAATTAGCTGATGAACTTCCTTTTGGT
TATGTGCAATTTACAAATCCAAAAGAAAGCGATCTTTGTTTAGCCATCTTAGAAGATGGAACCTTTGGAGCAAAATCTTG
TCAAGATGATCTAAAAGATGGTAAATTAGAAACTGTATTTTCTATAATGCCAACAACAACTTCAGCTGTGCAAATTCGTT
CTTTAGTTTTGGAATCTGATGAATGTATAGTAACTTTTTTTAATCCAAATATTCCTATACAAAAACGCTTTGGAATAGCC
CCTTGCACCCTAGATCCTATTTTTTTTGCTGAAGTAAATGAACTAATGATTATAACCCCACCTTTAACAGCTGCTACCCC
TTTAGAATAA

Upstream 100 bases:

>100_bases
CCACCGCTTTTAGCTGCAATTTTAATGCTTGCAAGTTTAAGATCTCATATAGTTTCAGATCATTTTCCAGTAAATTTTAG
AAAATTTTAGGACATTTAAT

Downstream 100 bases:

>100_bases
GATTTTTATCTTGTTCTATTTTTATATTTATTTAATATTTATGATATTACTAAAATACACAAAATAATTAATAATAATAC
AATGTAATTTACCTTACTCT

Product: cytolethal distending toxin, subunit C

Products: NA

Alternate protein names: Cytolethal Distending xin A/C Family Protein; Cytolethal Distending xin Subunit C; Cytolethal Distending xin Subunit CdtC

Number of amino acids: Translated: 189; Mature: 189

Protein sequence:

>189_residues
MKKIITLFFMFITLAFATPTGDLKDFTEMVSIRSLETGIFLSAFRDTSKDPIDQNWNIKEIVLSDELKQKDKLADELPFG
YVQFTNPKESDLCLAILEDGTFGAKSCQDDLKDGKLETVFSIMPTTTSAVQIRSLVLESDECIVTFFNPNIPIQKRFGIA
PCTLDPIFFAEVNELMIITPPLTAATPLE

Sequences:

>Translated_189_residues
MKKIITLFFMFITLAFATPTGDLKDFTEMVSIRSLETGIFLSAFRDTSKDPIDQNWNIKEIVLSDELKQKDKLADELPFG
YVQFTNPKESDLCLAILEDGTFGAKSCQDDLKDGKLETVFSIMPTTTSAVQIRSLVLESDECIVTFFNPNIPIQKRFGIA
PCTLDPIFFAEVNELMIITPPLTAATPLE
>Mature_189_residues
MKKIITLFFMFITLAFATPTGDLKDFTEMVSIRSLETGIFLSAFRDTSKDPIDQNWNIKEIVLSDELKQKDKLADELPFG
YVQFTNPKESDLCLAILEDGTFGAKSCQDDLKDGKLETVFSIMPTTTSAVQIRSLVLESDECIVTFFNPNIPIQKRFGIA
PCTLDPIFFAEVNELMIITPPLTAATPLE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21158; Mature: 21158

Theoretical pI: Translated: 4.20; Mature: 4.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKIITLFFMFITLAFATPTGDLKDFTEMVSIRSLETGIFLSAFRDTSKDPIDQNWNIKE
CHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHEEEHHCCCCCCCCCCCCEEE
IVLSDELKQKDKLADELPFGYVQFTNPKESDLCLAILEDGTFGAKSCQDDLKDGKLETVF
EEECHHHHHHHHHHHHCCCCEEEECCCCCCCEEEEEEECCCCCCHHHHHHHCCCCCEEEE
SIMPTTTSAVQIRSLVLESDECIVTFFNPNIPIQKRFGIAPCTLDPIFFAEVNELMIITP
EECCCCHHHHHHHHHHCCCCCEEEEEECCCCCCHHCCCCCCCCCCCEEEECCCCEEEEEC
PLTAATPLE
CCCCCCCCC
>Mature Secondary Structure
MKKIITLFFMFITLAFATPTGDLKDFTEMVSIRSLETGIFLSAFRDTSKDPIDQNWNIKE
CHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHEEEHHCCCCCCCCCCCCEEE
IVLSDELKQKDKLADELPFGYVQFTNPKESDLCLAILEDGTFGAKSCQDDLKDGKLETVF
EEECHHHHHHHHHHHHCCCCEEEECCCCCCCEEEEEEECCCCCCHHHHHHHCCCCCEEEE
SIMPTTTSAVQIRSLVLESDECIVTFFNPNIPIQKRFGIAPCTLDPIFFAEVNELMIITP
EECCCCHHHHHHHHHHCCCCCEEEEEECCCCCCHHCCCCCCCCCCCEEEECCCCEEEEEC
PLTAATPLE
CCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA