Click here to switch to the map view.

The map label for this gene is 57237051

Identifier: 57237051

GI number: 57237051

Start: 54334

End: 55377

Strand: Reverse

Name: 57237051

Synonym: CJE0036

Alternate gene names: NA

Gene position: 55377-54334 (Counterclockwise)

Preceding gene: 57237052

Following gene: 57237049

Centisome position: 3.11

GC content: 36.59

Gene sequence:

>1044_bases
ATGAAAAAACACATTTTATTGCTTGGTTTATGTCTTAGTTTGAGTCTTAGTGCTAAAAGCGTGAGTGATTACAAAGTAGG
AGAAGAATTAAGCGACAAGGAAGGAGTAGAGTATTTTAAGGAACTTTCCAAAAGACCTGTGCAAGAATGGCCAAATAAAA
ATTTAAGCATCAATGATGTTCCAAAAGGCAAGCAAGGGGATTTAATCCGTTATGGCATAGAGCTTTTAAGCAAGACAGAA
AGTACTCTAGGACCCTATAGCAAGCTAAAAAAGACAAGCAACGAAGTAAATTGTATTTCCTGTCACATGGACAATGACGG
CAATGGTTTGCCAGGGACAAAAAAATATGTTATTCCATTTTTAAATATCCTAAACAATTATCCAAGACTTGACATAGAAA
CGATGAAAATCATCTCTGTTGAAGATAGAATTCGCGGAATGGGCGGAACTGACTCTCATAGATTTCCTAATGATTCTAAA
GAAATGAAAGCAATTTTAGCTTATTTTAAATGGCTAAAAGAAGCTTATGGTATCAAAGACGGTGTAAAACTTGAAGGAGA
TTTTTTTGCTAAGATGAATTTTCCAAATCGCCCAGCTGACCCTGTGCGTGGGAAAAAGCTCTTTGAAGAAAATTGCGTTG
CTTGCCATGGCGAAAGAGGACTTGGGGTAAAAAATGATAATTACGAACAAGGTAGCGGACATTTATATCCATCTTTACTT
ATCTATCCTGATGGTGGACACATGGCTATGATACCATTTTTAGCAAGATTTTTAAAATCAGCCATGCCTTTTGGTGCGAG
TGCGGATAATCCTATATTAAGCGATGAAGATGCACTAGATATAGCAGCTTATGTCAATACAGGTTTTGTAAGAATGCCTA
TAACCACTACAGAAAATCGTGCAGGACTTGATACAGCTTATAGCAAATCCCCATCATTAAAACCTGAGTATTTTGCCTCA
CCGCAACAAAATTTAGACCCTAAAGAATACATAAAAGTAAAATACGGACCTTGGAAAAATCCAAATCACTTCCCAGGAGA
ATGA

Upstream 100 bases:

>100_bases
TTTAAAATTTAATTTTATTTAAATTATTCTTATTATGCTTAATATTTAAGAAAAAATACACTAAAATCAATTTGAACTGC
AAATAAAAAGGAGGAAAATC

Downstream 100 bases:

>100_bases
TTAATTTTGGGCTTAGCCCAAAATTAATCCTCATCTTTTGCTAAATTTTCAAGACTTTTAATCCCTTCTTCGCCTATCAA
ATTTCCACCTTGTAAGTCGC

Product: cytochrome C family protein

Products: NA

Alternate protein names: Cytochrome C Family Protein; Cytochrome C; Gluconate 2-Dehydrogenase; Cytochrome C Signal Peptide Protein; Thiosulfate Dehydrogenase; Cytochrome; OmpA/MotB; C-Type Cytochrome; Cytochrome C Family Protein Degenerate; Quinol-Cytochrome C Reductase Cytochrome C Subunit; CYTA Protein; Cytochrome C Family; Di-Heme Cytochrome C; Class I Cytochrome C

Number of amino acids: Translated: 347; Mature: 347

Protein sequence:

>347_residues
MKKHILLLGLCLSLSLSAKSVSDYKVGEELSDKEGVEYFKELSKRPVQEWPNKNLSINDVPKGKQGDLIRYGIELLSKTE
STLGPYSKLKKTSNEVNCISCHMDNDGNGLPGTKKYVIPFLNILNNYPRLDIETMKIISVEDRIRGMGGTDSHRFPNDSK
EMKAILAYFKWLKEAYGIKDGVKLEGDFFAKMNFPNRPADPVRGKKLFEENCVACHGERGLGVKNDNYEQGSGHLYPSLL
IYPDGGHMAMIPFLARFLKSAMPFGASADNPILSDEDALDIAAYVNTGFVRMPITTTENRAGLDTAYSKSPSLKPEYFAS
PQQNLDPKEYIKVKYGPWKNPNHFPGE

Sequences:

>Translated_347_residues
MKKHILLLGLCLSLSLSAKSVSDYKVGEELSDKEGVEYFKELSKRPVQEWPNKNLSINDVPKGKQGDLIRYGIELLSKTE
STLGPYSKLKKTSNEVNCISCHMDNDGNGLPGTKKYVIPFLNILNNYPRLDIETMKIISVEDRIRGMGGTDSHRFPNDSK
EMKAILAYFKWLKEAYGIKDGVKLEGDFFAKMNFPNRPADPVRGKKLFEENCVACHGERGLGVKNDNYEQGSGHLYPSLL
IYPDGGHMAMIPFLARFLKSAMPFGASADNPILSDEDALDIAAYVNTGFVRMPITTTENRAGLDTAYSKSPSLKPEYFAS
PQQNLDPKEYIKVKYGPWKNPNHFPGE
>Mature_347_residues
MKKHILLLGLCLSLSLSAKSVSDYKVGEELSDKEGVEYFKELSKRPVQEWPNKNLSINDVPKGKQGDLIRYGIELLSKTE
STLGPYSKLKKTSNEVNCISCHMDNDGNGLPGTKKYVIPFLNILNNYPRLDIETMKIISVEDRIRGMGGTDSHRFPNDSK
EMKAILAYFKWLKEAYGIKDGVKLEGDFFAKMNFPNRPADPVRGKKLFEENCVACHGERGLGVKNDNYEQGSGHLYPSLL
IYPDGGHMAMIPFLARFLKSAMPFGASADNPILSDEDALDIAAYVNTGFVRMPITTTENRAGLDTAYSKSPSLKPEYFAS
PQQNLDPKEYIKVKYGPWKNPNHFPGE

Specific function: Unknown

COG id: COG3258

COG function: function code C; Cytochrome c

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38844; Mature: 38844

Theoretical pI: Translated: 8.17; Mature: 8.17

Prosite motif: PS51007 CYTC L=RR ; PS51008 MULTIHEME_CYTC L=rr

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKHILLLGLCLSLSLSAKSVSDYKVGEELSDKEGVEYFKELSKRPVQEWPNKNLSINDV
CCCCEEEEEHHHHHCCCCCCCCHHHCCCCCCHHHHHHHHHHHHCCCHHHCCCCCCCCCCC
PKGKQGDLIRYGIELLSKTESTLGPYSKLKKTSNEVNCISCHMDNDGNGLPGTKKYVIPF
CCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHCCCCCEEEEEEECCCCCCCCCCHHHHHHH
LNILNNYPRLDIETMKIISVEDRIRGMGGTDSHRFPNDSKEMKAILAYFKWLKEAYGIKD
HHHHCCCCCCCEEEEEEEEHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC
GVKLEGDFFAKMNFPNRPADPVRGKKLFEENCVACHGERGLGVKNDNYEQGSGHLYPSLL
CEEECCCEEEEECCCCCCCCCCHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCCCCEEE
IYPDGGHMAMIPFLARFLKSAMPFGASADNPILSDEDALDIAAYVNTGFVRMPITTTENR
EEECCCCEEHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHEEEECCCCEEEEEEEECCCC
AGLDTAYSKSPSLKPEYFASPQQNLDPKEYIKVKYGPWKNPNHFPGE
CCCCHHHCCCCCCCHHHHCCCCCCCCHHHEEEEEECCCCCCCCCCCC
>Mature Secondary Structure
MKKHILLLGLCLSLSLSAKSVSDYKVGEELSDKEGVEYFKELSKRPVQEWPNKNLSINDV
CCCCEEEEEHHHHHCCCCCCCCHHHCCCCCCHHHHHHHHHHHHCCCHHHCCCCCCCCCCC
PKGKQGDLIRYGIELLSKTESTLGPYSKLKKTSNEVNCISCHMDNDGNGLPGTKKYVIPF
CCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHCCCCCEEEEEEECCCCCCCCCCHHHHHHH
LNILNNYPRLDIETMKIISVEDRIRGMGGTDSHRFPNDSKEMKAILAYFKWLKEAYGIKD
HHHHCCCCCCCEEEEEEEEHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC
GVKLEGDFFAKMNFPNRPADPVRGKKLFEENCVACHGERGLGVKNDNYEQGSGHLYPSLL
CEEECCCEEEEECCCCCCCCCCHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCCCCEEE
IYPDGGHMAMIPFLARFLKSAMPFGASADNPILSDEDALDIAAYVNTGFVRMPITTTENR
EEECCCCEEHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHEEEECCCCEEEEEEEECCCC
AGLDTAYSKSPSLKPEYFASPQQNLDPKEYIKVKYGPWKNPNHFPGE
CCCCHHHCCCCCCCHHHHCCCCCCCCHHHEEEEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA