| Definition | Campylobacter jejuni RM1221, complete genome. |
|---|---|
| Accession | NC_003912 |
| Length | 1,777,831 |
Click here to switch to the map view.
The map label for this gene is 57236929
Identifier: 57236929
GI number: 57236929
Start: 19982
End: 21508
Strand: Reverse
Name: 57236929
Synonym: CJE0017
Alternate gene names: NA
Gene position: 21508-19982 (Counterclockwise)
Preceding gene: 57236930
Following gene: 57236927
Centisome position: 1.21
GC content: 33.2
Gene sequence:
>1527_bases ATGAACGAAATCAATAAAACAAAAAATTTCTACACACTAATGTGTTTAGCAGGCTTTTTGATTATACTCTTGCCTGTAGG TATTGCAAATTTGATATTTGGTTATATGTTGGGCGATAGTCCTTGCACGCTTTGCTGGGGACAAAGAGAAGCAATGATCT TTATCGGTGTAATGGCGCTTTTCATTGTTCGTTATGGTATGAAAGGTAAATACCTTGCTGCTCTTTTAATCATGACAGCA GTAGGGCTTTATCAATCTTTTGCTCACTATGGTAATCACGCTCATAGAGATTTAGATCAAGGTTTTGGTTTAGCAGTTTT TGGTATCCATACTTATTTTTGGGCTGAAGTAGTATTTTGGGCTGTTGTATTGCTCTTAGGTGTGATTTTTGCTTTTGCTC CTAAATTTAATGCTTTTGAAGCTGAACTAAATGGAGAAAAGTTTAGAAAATATACTAAATTTAGCTTTGCAGCAGTTTTA ATCAGTGCTATCATCGTAGCATCAAATGTTTTCCAAGCCTTTGTTAGCACAGGTATTCCTCCTTATGTAGGACAAGGCGA TCCTGTAAGATTTAGTTTAAATCCAAAATACATCATTTGGAGTAAAGAAGGTTGGAATGGTTTATGGCAAAATATTTCTT TCTTAGGAAAACGCGATGTTAAAGCTCCTGATTATGCTTTTGCACCTGCAAGTGAAAAACTTGGCATAAAATTTGATAAT GATATCAACAATGCTCCATTTGCAAAAATCAATGATGAGCTTAAAATCACAAATGAACAAACCATAAATTTTGACAAAGC CATCAATACTCTTGATTATATCAATAACGAATTTGTAGCAAGTTCTAAATGGGATGTAGCTTTCTTAGATAATAATTTTA GCGTTAAAGAAGGTTTTGAACTTGATCCTTATTTTTCAGCTACTATTGATCCAATCATCGGTATCATACCTTATATGAAC GATAAATTCATTCTTATGGGCTCAAACAAATCTTTCTTAAGATTTGCAAAAAATCCTAATGCAAGTGAAGAAGATATCGC TAAACAATACGCTGACTTTGTAAAAGGCAATGATAAATTTAAAGGTCAAGGCGAAAGTTTAGGTCGCGGAAGACTTGATA CCGTAAGAGCAAAATTTAACCATGTAGCAAGTATGACTACAGATGGAAATTATCTTTATCTTGCAACTGTTCCAAACAAC AAAGACGCTAAAACTTTTGTAATCTCTAAAGTTTCTTTAAAAGATCGTGTTCTTTCAGGAGAATTTACTCCAAAAGCAAA TCTTAAAGAAGGTAAAACTTTAGGCGATCTTTATGTAACTTCTATGACTTTTAAAGATGGGGAAATTTATGCACTTAGCA AAAATCACAATGTCATTGCTGTAATTGATCCAGTCAAAGAAGAAGTAGTGAAAACTATCGCTTTCCCAAGCTCTATCACT AATGCTAGAAGCATTTTCTTTAAAGATGGAAAAATCAATATTCTTTCTTATCAAGATGGAGCAAACAAGCTTTATACTTT AAACTAA
Upstream 100 bases:
>100_bases TTGGTTTGGTAATGGTAGCTTGGCTTTTAATGGTTTTTTTCTATGTTGGCCACAAAACAGGCGCACTATTAACAATAATG AATCTGTAAGGAAGGGCTAA
Downstream 100 bases:
>100_bases GCTTTAAGTCCTAGTGAAAACTAGGACTTATATTTAATCTTATCTTTAAATCCTGCTTTTTCAAAACCTCTTAAACGAAG CAAACAACTATCGCACTCCC
Product: DsbB family disulfide bond formation protein
Products: NA
Alternate protein names: Disulfide Bond Formation Protein DsbB Family; DsbB Family Disulfide Bond Formation Protein; Disulfide Bond Formation Protein DsbB; Disulfide Bond Formation Protein; Dsbb-Like Protein
Number of amino acids: Translated: 508; Mature: 508
Protein sequence:
>508_residues MNEINKTKNFYTLMCLAGFLIILLPVGIANLIFGYMLGDSPCTLCWGQREAMIFIGVMALFIVRYGMKGKYLAALLIMTA VGLYQSFAHYGNHAHRDLDQGFGLAVFGIHTYFWAEVVFWAVVLLLGVIFAFAPKFNAFEAELNGEKFRKYTKFSFAAVL ISAIIVASNVFQAFVSTGIPPYVGQGDPVRFSLNPKYIIWSKEGWNGLWQNISFLGKRDVKAPDYAFAPASEKLGIKFDN DINNAPFAKINDELKITNEQTINFDKAINTLDYINNEFVASSKWDVAFLDNNFSVKEGFELDPYFSATIDPIIGIIPYMN DKFILMGSNKSFLRFAKNPNASEEDIAKQYADFVKGNDKFKGQGESLGRGRLDTVRAKFNHVASMTTDGNYLYLATVPNN KDAKTFVISKVSLKDRVLSGEFTPKANLKEGKTLGDLYVTSMTFKDGEIYALSKNHNVIAVIDPVKEEVVKTIAFPSSIT NARSIFFKDGKINILSYQDGANKLYTLN
Sequences:
>Translated_508_residues MNEINKTKNFYTLMCLAGFLIILLPVGIANLIFGYMLGDSPCTLCWGQREAMIFIGVMALFIVRYGMKGKYLAALLIMTA VGLYQSFAHYGNHAHRDLDQGFGLAVFGIHTYFWAEVVFWAVVLLLGVIFAFAPKFNAFEAELNGEKFRKYTKFSFAAVL ISAIIVASNVFQAFVSTGIPPYVGQGDPVRFSLNPKYIIWSKEGWNGLWQNISFLGKRDVKAPDYAFAPASEKLGIKFDN DINNAPFAKINDELKITNEQTINFDKAINTLDYINNEFVASSKWDVAFLDNNFSVKEGFELDPYFSATIDPIIGIIPYMN DKFILMGSNKSFLRFAKNPNASEEDIAKQYADFVKGNDKFKGQGESLGRGRLDTVRAKFNHVASMTTDGNYLYLATVPNN KDAKTFVISKVSLKDRVLSGEFTPKANLKEGKTLGDLYVTSMTFKDGEIYALSKNHNVIAVIDPVKEEVVKTIAFPSSIT NARSIFFKDGKINILSYQDGANKLYTLN >Mature_508_residues MNEINKTKNFYTLMCLAGFLIILLPVGIANLIFGYMLGDSPCTLCWGQREAMIFIGVMALFIVRYGMKGKYLAALLIMTA VGLYQSFAHYGNHAHRDLDQGFGLAVFGIHTYFWAEVVFWAVVLLLGVIFAFAPKFNAFEAELNGEKFRKYTKFSFAAVL ISAIIVASNVFQAFVSTGIPPYVGQGDPVRFSLNPKYIIWSKEGWNGLWQNISFLGKRDVKAPDYAFAPASEKLGIKFDN DINNAPFAKINDELKITNEQTINFDKAINTLDYINNEFVASSKWDVAFLDNNFSVKEGFELDPYFSATIDPIIGIIPYMN DKFILMGSNKSFLRFAKNPNASEEDIAKQYADFVKGNDKFKGQGESLGRGRLDTVRAKFNHVASMTTDGNYLYLATVPNN KDAKTFVISKVSLKDRVLSGEFTPKANLKEGKTLGDLYVTSMTFKDGEIYALSKNHNVIAVIDPVKEEVVKTIAFPSSIT NARSIFFKDGKINILSYQDGANKLYTLN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 56784; Mature: 56784
Theoretical pI: Translated: 8.80; Mature: 8.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNEINKTKNFYTLMCLAGFLIILLPVGIANLIFGYMLGDSPCTLCWGQREAMIFIGVMAL CCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHH FIVRYGMKGKYLAALLIMTAVGLYQSFAHYGNHAHRDLDQGFGLAVFGIHTYFWAEVVFW HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCEEEHHHHHHHHHHHHHH AVVLLLGVIFAFAPKFNAFEAELNGEKFRKYTKFSFAAVLISAIIVASNVFQAFVSTGIP HHHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC PYVGQGDPVRFSLNPKYIIWSKEGWNGLWQNISFLGKRDVKAPDYAFAPASEKLGIKFDN CCCCCCCCEEEEECCCEEEECCCCCCHHHHHHHHHCCCCCCCCCCEECCCCCCCCEEECC DINNAPFAKINDELKITNEQTINFDKAINTLDYINNEFVASSKWDVAFLDNNFSVKEGFE CCCCCCCEEECCCEEECCCCEECHHHHHHHHHHCCCCEEECCCCCEEEECCCCCCCCCCC LDPYFSATIDPIIGIIPYMNDKFILMGSNKSFLRFAKNPNASEEDIAKQYADFVKGNDKF CCCCHHHHHHHHHHHHCCCCCCEEEEECCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCC KGQGESLGRGRLDTVRAKFNHVASMTTDGNYLYLATVPNNKDAKTFVISKVSLKDRVLSG CCCCCCCCCCCHHHHHHHHHHHEEEECCCCEEEEEECCCCCCCCEEEEEEECHHHHHCCC EFTPKANLKEGKTLGDLYVTSMTFKDGEIYALSKNHNVIAVIDPVKEEVVKTIAFPSSIT CCCCCCCCCCCCEECCEEEEEEEECCCEEEEEECCCCEEEEECCHHHHHHHHHHCCCCCC NARSIFFKDGKINILSYQDGANKLYTLN CCEEEEEECCEEEEEEECCCCCEEEEEC >Mature Secondary Structure MNEINKTKNFYTLMCLAGFLIILLPVGIANLIFGYMLGDSPCTLCWGQREAMIFIGVMAL CCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHH FIVRYGMKGKYLAALLIMTAVGLYQSFAHYGNHAHRDLDQGFGLAVFGIHTYFWAEVVFW HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCEEEHHHHHHHHHHHHHH AVVLLLGVIFAFAPKFNAFEAELNGEKFRKYTKFSFAAVLISAIIVASNVFQAFVSTGIP HHHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC PYVGQGDPVRFSLNPKYIIWSKEGWNGLWQNISFLGKRDVKAPDYAFAPASEKLGIKFDN CCCCCCCCEEEEECCCEEEECCCCCCHHHHHHHHHCCCCCCCCCCEECCCCCCCCEEECC DINNAPFAKINDELKITNEQTINFDKAINTLDYINNEFVASSKWDVAFLDNNFSVKEGFE CCCCCCCEEECCCEEECCCCEECHHHHHHHHHHCCCCEEECCCCCEEEECCCCCCCCCCC LDPYFSATIDPIIGIIPYMNDKFILMGSNKSFLRFAKNPNASEEDIAKQYADFVKGNDKF CCCCHHHHHHHHHHHHCCCCCCEEEEECCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCC KGQGESLGRGRLDTVRAKFNHVASMTTDGNYLYLATVPNNKDAKTFVISKVSLKDRVLSG CCCCCCCCCCCHHHHHHHHHHHEEEECCCCEEEEEECCCCCCCCEEEEEEECHHHHHCCC EFTPKANLKEGKTLGDLYVTSMTFKDGEIYALSKNHNVIAVIDPVKEEVVKTIAFPSSIT CCCCCCCCCCCCEECCEEEEEEEECCCEEEEEECCCCEEEEECCHHHHHHHHHHCCCCCC NARSIFFKDGKINILSYQDGANKLYTLN CCEEEEEECCEEEEEEECCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA