| Definition | Dehalococcoides ethenogenes 195, complete genome. |
|---|---|
| Accession | NC_002936 |
| Length | 1,469,720 |
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The map label for this gene is ygjT [C]
Identifier: 57235066
GI number: 57235066
Start: 177388
End: 178353
Strand: Direct
Name: ygjT [C]
Synonym: DET0184
Alternate gene names: 57235066
Gene position: 177388-178353 (Clockwise)
Preceding gene: 57235067
Following gene: 57235055
Centisome position: 12.07
GC content: 45.86
Gene sequence:
>966_bases TTGTCGCTGACTGTTTTGTGGATAATATTTGCCGTAATGGTGCTGTGTATGCTGGCACTGGACCTGGGCGTCTTTCACCG CCGTGCCCATGAAGTAAAAACTAAAGAAGCCCTTATCTGGAGCGGCGTCTGGATTTTGCTGGCCCTGATATTCGGCGGGC TTATATATTTCAGTATGGGCAGCGAATTCGGGCTTAATTACCTGAGCGGGTATATTATTGAGCTGTCCCTTTCGGTAGAT AACCTGTTTGTGTTTATCATGATATTCTCGTACTTTTGTATTAAGCGGGAGTATCAGCACAAGGTTTTGTTCTGGGGTAT TCTGGGGGCTATTATTATGCGGGCGGTTTTTATAGCGGCCGGCATTACCCTTATAGAAAACCTTAGCTGGGTACTGTATA TATTCGGGGCTTTCCTTATCTATACCGGTATCCGCATGGTCAAAGACCAAAATCAGGAAATACACCCTGATAAGAACCCG CTGGTGAATTTTGTCTGCCGTATTTTGCCCATGACCAACAAACTGCACGGAGACCATTTCTTTATAAAAGAAAACGGCAG AAAACTGGCTACCCCCCTGATTCTGGTACTGGTTACCATAGAGGCTATGGATTTGGTTTTTGCCATAGATTCCATACCGG CGGTTATGGCTATTACGTTAGACCCGTTTATTGTCTTTACGTCTAACATCTTTGCGGTGATGGGCCTTAGGGCTATGTAT ATGGCTCTTTCGGGGATTATCCAAAAGCTGCATTATCTGCATTATGGTTTGGCTGCTATCTTGTCTTTTCTGGGTATTAA GATGCTTATCAGTGAATTTGTCCACCTGCCGGTGGCGCTTTCCTTAAGTGTGGTGGCGGTTATACTGGCGGTATCGGTTG CGGCGTCACTTCTTAAGCCGCCTAAGGAAATAAAGCCGGTTGAAGTACCTCACCCGGAGTGTCCGGTAGATGAGGGTGAT AAGTAA
Upstream 100 bases:
>100_bases GGTGTTATATTAGCCTGATTAATACGGTGCATAAACAAAAGCTGTTTATTTTGGTATTTTGCTTTGGGATAAACTGTATC TGGTTTAAAGGAGCATAGCC
Downstream 100 bases:
>100_bases ACAACAGGGGGGCGAAAGCCCCCTTCCTTTTTCCCGGTATTATCTGGCTTGGTGTGCTTTCCCCGTGAATTTTGCCTGAC TAAAATGGCATAGCTATGCG
Product: TerC family membrane protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 321; Mature: 320
Protein sequence:
>321_residues MSLTVLWIIFAVMVLCMLALDLGVFHRRAHEVKTKEALIWSGVWILLALIFGGLIYFSMGSEFGLNYLSGYIIELSLSVD NLFVFIMIFSYFCIKREYQHKVLFWGILGAIIMRAVFIAAGITLIENLSWVLYIFGAFLIYTGIRMVKDQNQEIHPDKNP LVNFVCRILPMTNKLHGDHFFIKENGRKLATPLILVLVTIEAMDLVFAIDSIPAVMAITLDPFIVFTSNIFAVMGLRAMY MALSGIIQKLHYLHYGLAAILSFLGIKMLISEFVHLPVALSLSVVAVILAVSVAASLLKPPKEIKPVEVPHPECPVDEGD K
Sequences:
>Translated_321_residues MSLTVLWIIFAVMVLCMLALDLGVFHRRAHEVKTKEALIWSGVWILLALIFGGLIYFSMGSEFGLNYLSGYIIELSLSVD NLFVFIMIFSYFCIKREYQHKVLFWGILGAIIMRAVFIAAGITLIENLSWVLYIFGAFLIYTGIRMVKDQNQEIHPDKNP LVNFVCRILPMTNKLHGDHFFIKENGRKLATPLILVLVTIEAMDLVFAIDSIPAVMAITLDPFIVFTSNIFAVMGLRAMY MALSGIIQKLHYLHYGLAAILSFLGIKMLISEFVHLPVALSLSVVAVILAVSVAASLLKPPKEIKPVEVPHPECPVDEGD K >Mature_320_residues SLTVLWIIFAVMVLCMLALDLGVFHRRAHEVKTKEALIWSGVWILLALIFGGLIYFSMGSEFGLNYLSGYIIELSLSVDN LFVFIMIFSYFCIKREYQHKVLFWGILGAIIMRAVFIAAGITLIENLSWVLYIFGAFLIYTGIRMVKDQNQEIHPDKNPL VNFVCRILPMTNKLHGDHFFIKENGRKLATPLILVLVTIEAMDLVFAIDSIPAVMAITLDPFIVFTSNIFAVMGLRAMYM ALSGIIQKLHYLHYGLAAILSFLGIKMLISEFVHLPVALSLSVVAVILAVSVAASLLKPPKEIKPVEVPHPECPVDEGDK
Specific function: Unknown
COG id: COG0861
COG function: function code P; Membrane protein TerC, possibly involved in tellurium resistance
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the terC family [H]
Homologues:
Organism=Escherichia coli, GI48994922, Length=297, Percent_Identity=47.1380471380471, Blast_Score=267, Evalue=5e-73,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005496 - InterPro: IPR022369 [H]
Pfam domain/function: PF03741 TerC [H]
EC number: NA
Molecular weight: Translated: 35964; Mature: 35833
Theoretical pI: Translated: 7.32; Mature: 7.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLTVLWIIFAVMVLCMLALDLGVFHRRAHEVKTKEALIWSGVWILLALIFGGLIYFSMG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC SEFGLNYLSGYIIELSLSVDNLFVFIMIFSYFCIKREYQHKVLFWGILGAIIMRAVFIAA CHHCHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GITLIENLSWVLYIFGAFLIYTGIRMVKDQNQEIHPDKNPLVNFVCRILPMTNKLHGDHF HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEE FIKENGRKLATPLILVLVTIEAMDLVFAIDSIPAVMAITLDPFIVFTSNIFAVMGLRAMY EEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCHHHHHHHHHHHHHHHHHHH MALSGIIQKLHYLHYGLAAILSFLGIKMLISEFVHLPVALSLSVVAVILAVSVAASLLKP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC PKEIKPVEVPHPECPVDEGDK HHHCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SLTVLWIIFAVMVLCMLALDLGVFHRRAHEVKTKEALIWSGVWILLALIFGGLIYFSMG CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC SEFGLNYLSGYIIELSLSVDNLFVFIMIFSYFCIKREYQHKVLFWGILGAIIMRAVFIAA CHHCHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GITLIENLSWVLYIFGAFLIYTGIRMVKDQNQEIHPDKNPLVNFVCRILPMTNKLHGDHF HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEE FIKENGRKLATPLILVLVTIEAMDLVFAIDSIPAVMAITLDPFIVFTSNIFAVMGLRAMY EEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCHHHHHHHHHHHHHHHHHHH MALSGIIQKLHYLHYGLAAILSFLGIKMLISEFVHLPVALSLSVVAVILAVSVAASLLKP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC PKEIKPVEVPHPECPVDEGDK HHHCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA