Definition Dehalococcoides ethenogenes 195, complete genome.
Accession NC_002936
Length 1,469,720

Click here to switch to the map view.

The map label for this gene is ygjT [C]

Identifier: 57235066

GI number: 57235066

Start: 177388

End: 178353

Strand: Direct

Name: ygjT [C]

Synonym: DET0184

Alternate gene names: 57235066

Gene position: 177388-178353 (Clockwise)

Preceding gene: 57235067

Following gene: 57235055

Centisome position: 12.07

GC content: 45.86

Gene sequence:

>966_bases
TTGTCGCTGACTGTTTTGTGGATAATATTTGCCGTAATGGTGCTGTGTATGCTGGCACTGGACCTGGGCGTCTTTCACCG
CCGTGCCCATGAAGTAAAAACTAAAGAAGCCCTTATCTGGAGCGGCGTCTGGATTTTGCTGGCCCTGATATTCGGCGGGC
TTATATATTTCAGTATGGGCAGCGAATTCGGGCTTAATTACCTGAGCGGGTATATTATTGAGCTGTCCCTTTCGGTAGAT
AACCTGTTTGTGTTTATCATGATATTCTCGTACTTTTGTATTAAGCGGGAGTATCAGCACAAGGTTTTGTTCTGGGGTAT
TCTGGGGGCTATTATTATGCGGGCGGTTTTTATAGCGGCCGGCATTACCCTTATAGAAAACCTTAGCTGGGTACTGTATA
TATTCGGGGCTTTCCTTATCTATACCGGTATCCGCATGGTCAAAGACCAAAATCAGGAAATACACCCTGATAAGAACCCG
CTGGTGAATTTTGTCTGCCGTATTTTGCCCATGACCAACAAACTGCACGGAGACCATTTCTTTATAAAAGAAAACGGCAG
AAAACTGGCTACCCCCCTGATTCTGGTACTGGTTACCATAGAGGCTATGGATTTGGTTTTTGCCATAGATTCCATACCGG
CGGTTATGGCTATTACGTTAGACCCGTTTATTGTCTTTACGTCTAACATCTTTGCGGTGATGGGCCTTAGGGCTATGTAT
ATGGCTCTTTCGGGGATTATCCAAAAGCTGCATTATCTGCATTATGGTTTGGCTGCTATCTTGTCTTTTCTGGGTATTAA
GATGCTTATCAGTGAATTTGTCCACCTGCCGGTGGCGCTTTCCTTAAGTGTGGTGGCGGTTATACTGGCGGTATCGGTTG
CGGCGTCACTTCTTAAGCCGCCTAAGGAAATAAAGCCGGTTGAAGTACCTCACCCGGAGTGTCCGGTAGATGAGGGTGAT
AAGTAA

Upstream 100 bases:

>100_bases
GGTGTTATATTAGCCTGATTAATACGGTGCATAAACAAAAGCTGTTTATTTTGGTATTTTGCTTTGGGATAAACTGTATC
TGGTTTAAAGGAGCATAGCC

Downstream 100 bases:

>100_bases
ACAACAGGGGGGCGAAAGCCCCCTTCCTTTTTCCCGGTATTATCTGGCTTGGTGTGCTTTCCCCGTGAATTTTGCCTGAC
TAAAATGGCATAGCTATGCG

Product: TerC family membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 321; Mature: 320

Protein sequence:

>321_residues
MSLTVLWIIFAVMVLCMLALDLGVFHRRAHEVKTKEALIWSGVWILLALIFGGLIYFSMGSEFGLNYLSGYIIELSLSVD
NLFVFIMIFSYFCIKREYQHKVLFWGILGAIIMRAVFIAAGITLIENLSWVLYIFGAFLIYTGIRMVKDQNQEIHPDKNP
LVNFVCRILPMTNKLHGDHFFIKENGRKLATPLILVLVTIEAMDLVFAIDSIPAVMAITLDPFIVFTSNIFAVMGLRAMY
MALSGIIQKLHYLHYGLAAILSFLGIKMLISEFVHLPVALSLSVVAVILAVSVAASLLKPPKEIKPVEVPHPECPVDEGD
K

Sequences:

>Translated_321_residues
MSLTVLWIIFAVMVLCMLALDLGVFHRRAHEVKTKEALIWSGVWILLALIFGGLIYFSMGSEFGLNYLSGYIIELSLSVD
NLFVFIMIFSYFCIKREYQHKVLFWGILGAIIMRAVFIAAGITLIENLSWVLYIFGAFLIYTGIRMVKDQNQEIHPDKNP
LVNFVCRILPMTNKLHGDHFFIKENGRKLATPLILVLVTIEAMDLVFAIDSIPAVMAITLDPFIVFTSNIFAVMGLRAMY
MALSGIIQKLHYLHYGLAAILSFLGIKMLISEFVHLPVALSLSVVAVILAVSVAASLLKPPKEIKPVEVPHPECPVDEGD
K
>Mature_320_residues
SLTVLWIIFAVMVLCMLALDLGVFHRRAHEVKTKEALIWSGVWILLALIFGGLIYFSMGSEFGLNYLSGYIIELSLSVDN
LFVFIMIFSYFCIKREYQHKVLFWGILGAIIMRAVFIAAGITLIENLSWVLYIFGAFLIYTGIRMVKDQNQEIHPDKNPL
VNFVCRILPMTNKLHGDHFFIKENGRKLATPLILVLVTIEAMDLVFAIDSIPAVMAITLDPFIVFTSNIFAVMGLRAMYM
ALSGIIQKLHYLHYGLAAILSFLGIKMLISEFVHLPVALSLSVVAVILAVSVAASLLKPPKEIKPVEVPHPECPVDEGDK

Specific function: Unknown

COG id: COG0861

COG function: function code P; Membrane protein TerC, possibly involved in tellurium resistance

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the terC family [H]

Homologues:

Organism=Escherichia coli, GI48994922, Length=297, Percent_Identity=47.1380471380471, Blast_Score=267, Evalue=5e-73,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005496
- InterPro:   IPR022369 [H]

Pfam domain/function: PF03741 TerC [H]

EC number: NA

Molecular weight: Translated: 35964; Mature: 35833

Theoretical pI: Translated: 7.32; Mature: 7.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SLTVLWIIFAVMVLCMLALDLGVFHRRAHEVKTKEALIWSGVWILLALIFGGLIYFSMG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC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HHHCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA