| Definition | Dehalococcoides ethenogenes 195, complete genome. |
|---|---|
| Accession | NC_002936 |
| Length | 1,469,720 |
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The map label for this gene is coaD
Identifier: 57235054
GI number: 57235054
Start: 184562
End: 185041
Strand: Direct
Name: coaD
Synonym: DET0190
Alternate gene names: 57235054
Gene position: 184562-185041 (Clockwise)
Preceding gene: 57235055
Following gene: 57235053
Centisome position: 12.56
GC content: 50.0
Gene sequence:
>480_bases TTGATAGCCATTTACCCGGGCCGGTTTGACCCGGTAACCCTAGGCCATCTCAGCGTCGCCAGACGCGCTTCTGGCTTTTG TGACCGGCTGATTATTGCTGTCTTTGATAATCCTGCCAAACCGGGTCTTTTTACGGCTGCCGAAAGGGTAGACCTTATTA AGCAATCCGTCAAAGACCTTCCTAATGTAGAGGTGCATTCTTTCAGCGGGCTTATGGTTAATTTTGCCCGCAGGATGGGT GTTTCACTTATAATCCGCGGCCTCAGGGTAGGGGCTGATTTTGAGCGTGAAATGGAAATGTACGTCATGAACCGCCGTCT GGACGAGGGGATTGAGCTTTGCTGTCTTTTCTCAGAGCCTCAGTATCAGTATCTCAGTGCTTCGCTTATCAAAGAAGTGG TGATGCTGGGGGGGGATTCAAGCGGGTTAATCTCGGAACATGTGGCAGATGCTTTAAAAAACAAGTTGGCGTCTGCCTAG
Upstream 100 bases:
>100_bases GCCCATCTGACCCTGGCGGAGCGTTACGGGCGGCTTACGATGTTAAAAGAACATCGTCACGGTGATAGCCTGATTGCTAT ATATAGAAAGGACAGCCGTT
Downstream 100 bases:
>100_bases TGTGGTATAATCAATTAATTATTTTACAGGAGGGTGTATCGCCAGAAGAAGTTTTGCTTAAGACAGATTTTGGAGGTAGA AGGAATTTATGTCGTTCAAG
Product: phosphopantetheine adenylyltransferase
Products: NA
Alternate protein names: Dephospho-CoA pyrophosphorylase; Pantetheine-phosphate adenylyltransferase; PPAT
Number of amino acids: Translated: 159; Mature: 159
Protein sequence:
>159_residues MIAIYPGRFDPVTLGHLSVARRASGFCDRLIIAVFDNPAKPGLFTAAERVDLIKQSVKDLPNVEVHSFSGLMVNFARRMG VSLIIRGLRVGADFEREMEMYVMNRRLDEGIELCCLFSEPQYQYLSASLIKEVVMLGGDSSGLISEHVADALKNKLASA
Sequences:
>Translated_159_residues MIAIYPGRFDPVTLGHLSVARRASGFCDRLIIAVFDNPAKPGLFTAAERVDLIKQSVKDLPNVEVHSFSGLMVNFARRMG VSLIIRGLRVGADFEREMEMYVMNRRLDEGIELCCLFSEPQYQYLSASLIKEVVMLGGDSSGLISEHVADALKNKLASA >Mature_159_residues MIAIYPGRFDPVTLGHLSVARRASGFCDRLIIAVFDNPAKPGLFTAAERVDLIKQSVKDLPNVEVHSFSGLMVNFARRMG VSLIIRGLRVGADFEREMEMYVMNRRLDEGIELCCLFSEPQYQYLSASLIKEVVMLGGDSSGLISEHVADALKNKLASA
Specific function: Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
COG id: COG0669
COG function: function code H; Phosphopantetheine adenylyltransferase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial CoaD family
Homologues:
Organism=Escherichia coli, GI1790065, Length=155, Percent_Identity=45.1612903225806, Blast_Score=138, Evalue=2e-34,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): COAD_DEHE1 (Q3ZA11)
Other databases:
- EMBL: CP000027 - RefSeq: YP_180938.1 - HSSP: Q9WZK0 - ProteinModelPortal: Q3ZA11 - SMR: Q3ZA11 - STRING: Q3ZA11 - GeneID: 3230524 - GenomeReviews: CP000027_GR - KEGG: det:DET0190 - NMPDR: fig|243164.3.peg.195 - TIGR: DET0190 - eggNOG: COG0669 - HOGENOM: HBG288308 - OMA: VRQIAAM - PhylomeDB: Q3ZA11 - ProtClustDB: PRK00168 - BioCyc: DETH243164:DET_0190-MONOMER - GO: GO:0005737 - HAMAP: MF_00151 - InterPro: IPR004821 - InterPro: IPR004820 - InterPro: IPR001980 - InterPro: IPR014729 - Gene3D: G3DSA:3.40.50.620 - PRINTS: PR01020 - TIGRFAMs: TIGR01510 - TIGRFAMs: TIGR00125
Pfam domain/function: PF01467 CTP_transf_2
EC number: =2.7.7.3
Molecular weight: Translated: 17566; Mature: 17566
Theoretical pI: Translated: 6.78; Mature: 6.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIAIYPGRFDPVTLGHLSVARRASGFCDRLIIAVFDNPAKPGLFTAAERVDLIKQSVKDL CEEECCCCCCCEEHHHHHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHHHHC PNVEVHSFSGLMVNFARRMGVSLIIRGLRVGADFEREMEMYVMNRRLDEGIELCCLFSEP CCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCEEEEEECCC QYQYLSASLIKEVVMLGGDSSGLISEHVADALKNKLASA CHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure MIAIYPGRFDPVTLGHLSVARRASGFCDRLIIAVFDNPAKPGLFTAAERVDLIKQSVKDL CEEECCCCCCCEEHHHHHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHHHHC PNVEVHSFSGLMVNFARRMGVSLIIRGLRVGADFEREMEMYVMNRRLDEGIELCCLFSEP CCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCEEEEEECCC QYQYLSASLIKEVVMLGGDSSGLISEHVADALKNKLASA CHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA