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The map label for this gene is yqfA [H]

Identifier: 57234980

GI number: 57234980

Start: 216499

End: 217086

Strand: Direct

Name: yqfA [H]

Synonym: DET0223

Alternate gene names: 57234980

Gene position: 216499-217086 (Clockwise)

Preceding gene: 57234982

Following gene: 57234976

Centisome position: 14.73

GC content: 49.32

Gene sequence:

>588_bases
GTGGGGGGTGTGCTGGCACTGATAGTGCTGGTCATACTTAGCTGGGGGAACTGGGATATCATGGCGGTCTCAGTCATTTA
TGCGCTGGCTGTTATCAGCCTGTTTTCTTTCAGTACTATTTACCACGCCCTGAAAAAACAGGAAAATGAAATAAATGTCT
GGCGCAAGCTTGACCATATAGCCATATTTATAATGATAGCCGGTACTTATACCCCCATGGCTTATATCTATCTGGACGGG
GGCTGGCGGCTGGGTATGCTTATTGCCACCTGGGCTTTTGTACTTATAGGTGTCTTCCAGAAGGTGTTTTTCCTGAATGC
ACCCCGCTGGCTCTCACCGGTAACCTATCTGGGTATGGGCTGGATGGCGGTTTTCCCTTTAAGAGAGTTTTGGCTGAATA
TGCCGTCTCTGGTGTTCTGGCTGATTGCTTGCGGCGGTTTGGCCTACAGCATAGGGGCGGTTATTTACGGTATTAAAAAG
CCAAACCCGGTGCCGGGAGTATTCGGTTTCCACGAGATATTCCATGCCCTTATACTCTTGGGCTGGGCGTTTCATCTGGC
GGCGGTTATACTGGCTATCTTAGGCTAA

Upstream 100 bases:

>100_bases
TCCAGCCCAAAGGTTTATAATTGTAGTTTCTTTCAGGAGGACCGATATAAATATACGCAAAGCGGAGCGCTTTTCTTCAT
TTTCTCATCTGGCAGGGGCG

Downstream 100 bases:

>100_bases
TTATCCAGTGCCTTCAGGGCATCTTCCAGTTTCTGTTTGAGGGCATCGTTCTGCTGGCATAGCCTTAGCCATTTATCACC
CAGAGTGACCAGCTGCTCCT

Product: hemolysin, putative

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 195; Mature: 194

Protein sequence:

>195_residues
MGGVLALIVLVILSWGNWDIMAVSVIYALAVISLFSFSTIYHALKKQENEINVWRKLDHIAIFIMIAGTYTPMAYIYLDG
GWRLGMLIATWAFVLIGVFQKVFFLNAPRWLSPVTYLGMGWMAVFPLREFWLNMPSLVFWLIACGGLAYSIGAVIYGIKK
PNPVPGVFGFHEIFHALILLGWAFHLAAVILAILG

Sequences:

>Translated_195_residues
MGGVLALIVLVILSWGNWDIMAVSVIYALAVISLFSFSTIYHALKKQENEINVWRKLDHIAIFIMIAGTYTPMAYIYLDG
GWRLGMLIATWAFVLIGVFQKVFFLNAPRWLSPVTYLGMGWMAVFPLREFWLNMPSLVFWLIACGGLAYSIGAVIYGIKK
PNPVPGVFGFHEIFHALILLGWAFHLAAVILAILG
>Mature_194_residues
GGVLALIVLVILSWGNWDIMAVSVIYALAVISLFSFSTIYHALKKQENEINVWRKLDHIAIFIMIAGTYTPMAYIYLDGG
WRLGMLIATWAFVLIGVFQKVFFLNAPRWLSPVTYLGMGWMAVFPLREFWLNMPSLVFWLIACGGLAYSIGAVIYGIKKP
NPVPGVFGFHEIFHALILLGWAFHLAAVILAILG

Specific function: Unknown

COG id: COG1272

COG function: function code R; Predicted membrane protein, hemolysin III homolog

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0073 (Hly-III) family [H]

Homologues:

Organism=Escherichia coli, GI1789266, Length=194, Percent_Identity=35.0515463917526, Blast_Score=94, Evalue=7e-21,
Organism=Caenorhabditis elegans, GI71996356, Length=180, Percent_Identity=28.3333333333333, Blast_Score=64, Evalue=6e-11,
Organism=Saccharomyces cerevisiae, GI6320699, Length=198, Percent_Identity=26.7676767676768, Blast_Score=64, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004254
- InterPro:   IPR005744 [H]

Pfam domain/function: PF03006 HlyIII [H]

EC number: NA

Molecular weight: Translated: 21826; Mature: 21694

Theoretical pI: Translated: 9.31; Mature: 9.31

Prosite motif: PS00639 THIOL_PROTEASE_HIS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGGVLALIVLVILSWGNWDIMAVSVIYALAVISLFSFSTIYHALKKQENEINVWRKLDHI
CCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
AIFIMIAGTYTPMAYIYLDGGWRLGMLIATWAFVLIGVFQKVFFLNAPRWLSPVTYLGMG
HHHHHEECCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
WMAVFPLREFWLNMPSLVFWLIACGGLAYSIGAVIYGIKKPNPVPGVFGFHEIFHALILL
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHH
GWAFHLAAVILAILG
HHHHHHHHHHHHHHC
>Mature Secondary Structure 
GGVLALIVLVILSWGNWDIMAVSVIYALAVISLFSFSTIYHALKKQENEINVWRKLDHI
CHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
AIFIMIAGTYTPMAYIYLDGGWRLGMLIATWAFVLIGVFQKVFFLNAPRWLSPVTYLGMG
HHHHHEECCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
WMAVFPLREFWLNMPSLVFWLIACGGLAYSIGAVIYGIKKPNPVPGVFGFHEIFHALILL
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHH
GWAFHLAAVILAILG
HHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]