Definition Dehalococcoides ethenogenes 195, complete genome.
Accession NC_002936
Length 1,469,720

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The map label for this gene is 57234930

Identifier: 57234930

GI number: 57234930

Start: 313551

End: 314171

Strand: Direct

Name: 57234930

Synonym: DET0329

Alternate gene names: NA

Gene position: 313551-314171 (Clockwise)

Preceding gene: 57234834

Following gene: 57234929

Centisome position: 21.33

GC content: 51.85

Gene sequence:

>621_bases
ATGGATTTTATGTTAGCCACTCTGCTTAGTGTTACGGTTATATCTTTTTCAGGTGTGCTGATGCCCGGCCCCATGTTTGC
TCTGACTCTTTCACGGAGTTACCATACCCCCTGGGCAGGTGCCCAGATTGTGCTGGGGCATGTGCTGGTGGAACTGCCCA
TTATTCTGCTTATTTATTTCGGTTTTGCCGGTTTTTTTGAGCTTGTCTGGGTGCAGATACTGCTCAGTCTGGCAGGCGGA
ATTATGATTATTTACATGGGGCTGGGTATGATAAAAGCCCGCCGTGAAGCCGCTCAGGATAAGGCTAATTTTAAATATAA
TACAGTGGTGTCAGGTGCGGCCATGAGCGCCCTGAACCCGTTTTTTCTGGTCTGGTGGGCAACTGTAGGGGCGATGCTGG
TTATGAAGGTATCGGACTACGGGCTTGGGGGGCTGGGGGCTTTGGCGGCTACCCACTGGCTGGTGGATTTAGCCTGGCTT
TGTCTGGTTTCGTTTATTGTGTACCGCACCCACCGCCTGTGGGGGAGCAGGGTGCGGGAGATAGTTTTTATAGGCTGCGG
GTTGTTGCTTGCGGCTTTCGGGGTGTATTTCATTGTTTCCGGGCTGAAGCTGTGGCTTTAG

Upstream 100 bases:

>100_bases
TTGCTTCAGTATAAAACAAGATATGTATTCCCACAAGCAACAAATGGCATTTATGCCGGGGTGCGTCCGGGTTTTTGCCC
CTAACGGGAGAAGTGTTATA

Downstream 100 bases:

>100_bases
CGGTATCTTAATACGGAGAAGGTATTTTAATGGCAGTGGGGCTGGTTTATAACCATATATATTTGAACCACGAAACGGGT
ACCCATGTGGAAAACCCTGA

Product: amino acid transporter LysE

Products: NA

Alternate protein names: Lysine Exporter Protein LysE/YggA; Transporter Protein; Lysine Efflux Protein

Number of amino acids: Translated: 206; Mature: 206

Protein sequence:

>206_residues
MDFMLATLLSVTVISFSGVLMPGPMFALTLSRSYHTPWAGAQIVLGHVLVELPIILLIYFGFAGFFELVWVQILLSLAGG
IMIIYMGLGMIKARREAAQDKANFKYNTVVSGAAMSALNPFFLVWWATVGAMLVMKVSDYGLGGLGALAATHWLVDLAWL
CLVSFIVYRTHRLWGSRVREIVFIGCGLLLAAFGVYFIVSGLKLWL

Sequences:

>Translated_206_residues
MDFMLATLLSVTVISFSGVLMPGPMFALTLSRSYHTPWAGAQIVLGHVLVELPIILLIYFGFAGFFELVWVQILLSLAGG
IMIIYMGLGMIKARREAAQDKANFKYNTVVSGAAMSALNPFFLVWWATVGAMLVMKVSDYGLGGLGALAATHWLVDLAWL
CLVSFIVYRTHRLWGSRVREIVFIGCGLLLAAFGVYFIVSGLKLWL
>Mature_206_residues
MDFMLATLLSVTVISFSGVLMPGPMFALTLSRSYHTPWAGAQIVLGHVLVELPIILLIYFGFAGFFELVWVQILLSLAGG
IMIIYMGLGMIKARREAAQDKANFKYNTVVSGAAMSALNPFFLVWWATVGAMLVMKVSDYGLGGLGALAATHWLVDLAWL
CLVSFIVYRTHRLWGSRVREIVFIGCGLLLAAFGVYFIVSGLKLWL

Specific function: Unknown

COG id: COG1280

COG function: function code E; Putative threonine efflux protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22646; Mature: 22646

Theoretical pI: Translated: 9.40; Mature: 9.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDFMLATLLSVTVISFSGVLMPGPMFALTLSRSYHTPWAGAQIVLGHVLVELPIILLIYF
CHHHHHHHHHHHHHHHCCCCCCCCHHEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
GFAGFFELVWVQILLSLAGGIMIIYMGLGMIKARREAAQDKANFKYNTVVSGAAMSALNP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCH
FFLVWWATVGAMLVMKVSDYGLGGLGALAATHWLVDLAWLCLVSFIVYRTHRLWGSRVRE
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IVFIGCGLLLAAFGVYFIVSGLKLWL
HHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDFMLATLLSVTVISFSGVLMPGPMFALTLSRSYHTPWAGAQIVLGHVLVELPIILLIYF
CHHHHHHHHHHHHHHHCCCCCCCCHHEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
GFAGFFELVWVQILLSLAGGIMIIYMGLGMIKARREAAQDKANFKYNTVVSGAAMSALNP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCH
FFLVWWATVGAMLVMKVSDYGLGGLGALAATHWLVDLAWLCLVSFIVYRTHRLWGSRVRE
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IVFIGCGLLLAAFGVYFIVSGLKLWL
HHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA