Click here to switch to the map view.

The map label for this gene is yafE [C]

Identifier: 57234786

GI number: 57234786

Start: 381395

End: 381997

Strand: Direct

Name: yafE [C]

Synonym: DET0402

Alternate gene names: 57234786

Gene position: 381395-381997 (Clockwise)

Preceding gene: 57234787

Following gene: 57234785

Centisome position: 25.95

GC content: 46.93

Gene sequence:

>603_bases
ATGGTAGCCCCCAGTTTTTTTGAAAAAGTTGCCCCGGTATACGAATTTTTAACCCGTATGTTTATGCTGGGTACATTTGA
AAGTGCCCGTGACAGAATGCTGAATGAAGATACCTCGGCTTTCAGTGTTCTTGACCTGTGTACCGGTACCGGGTATATTG
CCAACAAGATAGAAGCAAAGCGGATTGTAGGTTTAGACCAGTCTGTCCAGATGATGGCCCTTAATGACCGCACCAAACGC
CCCAACAAAACTCTGGTACGGGGAAATGCTTACCATCTGCCGTTTGAAGACGGGGAGTTTGAGCGTATTTATTGCTCCAG
TGCCAGCCACGAGTTTAAACTCTTCGGTAAAGTACTGGCGGAATGCTTCCGTACCCTGAAGCCCGGCGGTAAGGTGGCTG
TTTATGATATTTACCAGCCCAAAAACAAGTTTTATTCCCTGATAGTCAATACTATATACCGTTATCCTGTTGAGCATAAT
ATTATGTGGGTGCATACGCTGGAGGAATGGCGCAAGCTTTTGACCGAAGCCGGTTTTGAGGTAGAGGAGCTGGAAGCTGT
GCGGGGGGTATTTGTATTTGTGCGGGCCCGTAAACCTGTTTAA

Upstream 100 bases:

>100_bases
GCTATTATAATGACCCCATAAAGGTAGCCATGGCCAATAAATTGATGGTCATAATATATTCGGTCACAACTGCTACGGTG
GCCATAGGGATGTTGACATA

Downstream 100 bases:

>100_bases
ACAGTAAAAAGTTATAGATATATTACAAACAGGCCTTATGCAAGGCCTGTTTTATTTTTCCGCAACAGGTATAGCTAAAA
ATGGACAGTGGGCACTTAAC

Product: UbiE/COQ5 family methlytransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 200; Mature: 200

Protein sequence:

>200_residues
MVAPSFFEKVAPVYEFLTRMFMLGTFESARDRMLNEDTSAFSVLDLCTGTGYIANKIEAKRIVGLDQSVQMMALNDRTKR
PNKTLVRGNAYHLPFEDGEFERIYCSSASHEFKLFGKVLAECFRTLKPGGKVAVYDIYQPKNKFYSLIVNTIYRYPVEHN
IMWVHTLEEWRKLLTEAGFEVEELEAVRGVFVFVRARKPV

Sequences:

>Translated_200_residues
MVAPSFFEKVAPVYEFLTRMFMLGTFESARDRMLNEDTSAFSVLDLCTGTGYIANKIEAKRIVGLDQSVQMMALNDRTKR
PNKTLVRGNAYHLPFEDGEFERIYCSSASHEFKLFGKVLAECFRTLKPGGKVAVYDIYQPKNKFYSLIVNTIYRYPVEHN
IMWVHTLEEWRKLLTEAGFEVEELEAVRGVFVFVRARKPV
>Mature_200_residues
MVAPSFFEKVAPVYEFLTRMFMLGTFESARDRMLNEDTSAFSVLDLCTGTGYIANKIEAKRIVGLDQSVQMMALNDRTKR
PNKTLVRGNAYHLPFEDGEFERIYCSSASHEFKLFGKVLAECFRTLKPGGKVAVYDIYQPKNKFYSLIVNTIYRYPVEHN
IMWVHTLEEWRKLLTEAGFEVEELEAVRGVFVFVRARKPV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013216 [H]

Pfam domain/function: PF08241 Methyltransf_11 [H]

EC number: NA

Molecular weight: Translated: 23131; Mature: 23131

Theoretical pI: Translated: 8.44; Mature: 8.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVAPSFFEKVAPVYEFLTRMFMLGTFESARDRMLNEDTSAFSVLDLCTGTGYIANKIEAK
CCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHH
RIVGLDQSVQMMALNDRTKRPNKTLVRGNAYHLPFEDGEFERIYCSSASHEFKLFGKVLA
HHHCCCCCCEEEEECCCCCCCCCEEEECCEEECCCCCCCCEEEEECCCCCHHHHHHHHHH
ECFRTLKPGGKVAVYDIYQPKNKFYSLIVNTIYRYPVEHNIMWVHTLEEWRKLLTEAGFE
HHHHHHCCCCCEEEEEEECCHHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHCCCC
VEELEAVRGVFVFVRARKPV
HHHHHHHHHHEEEEEECCCC
>Mature Secondary Structure
MVAPSFFEKVAPVYEFLTRMFMLGTFESARDRMLNEDTSAFSVLDLCTGTGYIANKIEAK
CCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHH
RIVGLDQSVQMMALNDRTKRPNKTLVRGNAYHLPFEDGEFERIYCSSASHEFKLFGKVLA
HHHCCCCCCEEEEECCCCCCCCCEEEECCEEECCCCCCCCEEEEECCCCCHHHHHHHHHH
ECFRTLKPGGKVAVYDIYQPKNKFYSLIVNTIYRYPVEHNIMWVHTLEEWRKLLTEAGFE
HHHHHHCCCCCEEEEEEECCHHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHCCCC
VEELEAVRGVFVFVRARKPV
HHHHHHHHHHEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]