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The map label for this gene is ycfF [C]

Identifier: 57234719

GI number: 57234719

Start: 430732

End: 431073

Strand: Direct

Name: ycfF [C]

Synonym: DET0455

Alternate gene names: 57234719

Gene position: 430732-431073 (Clockwise)

Preceding gene: 57234727

Following gene: 57234697

Centisome position: 29.31

GC content: 48.83

Gene sequence:

>342_bases
ATGAGTTGTATATTTTGCCAGATTGTCAAAGGGGAGATACCTGCCCAGATAGTTTACAAAGATGAAGATTTGGTGGCTTT
CAAAGATATAAATCCCCAGTCACCGGTGCATATACTTATTATCCCCCGCAGGCATATTACCAATCTGACTGAGCTGGACG
AAGCTGATACCGAACTGGCGGGTAAAATGATTTTACTGGCCGGCAAGCTTGCCCGTGAGATGGATATTGCCGAAAGCGGT
TACCGGCTGGTGATTAACAGCGGGCGTGAAGGCGGGCAGGTAGTTAATCACCTTCATTTACACCTTTTAGGCGGCCGCCA
GCTTGGCGGACAGCTGGGTTAG

Upstream 100 bases:

>100_bases
AAGGTGGAGGATTTTCCGGCTATAGTGGCTATTGACTCTCAGGGGAACAACGCTTTTACTCTTGGTCAGTCCATTTACCG
CACGGCTAAGGAGGCCTGAT

Downstream 100 bases:

>100_bases
ACAGAAGTCCGGCTGAAATACAGCATCAGCCCGGCCAGTGTCTTGGAGTCTGTTATTTGCCCCCCCGCAATCATGGCTTT
TACTTCCGCCGGGGTATAGC

Product: HIT domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 113; Mature: 112

Protein sequence:

>113_residues
MSCIFCQIVKGEIPAQIVYKDEDLVAFKDINPQSPVHILIIPRRHITNLTELDEADTELAGKMILLAGKLAREMDIAESG
YRLVINSGREGGQVVNHLHLHLLGGRQLGGQLG

Sequences:

>Translated_113_residues
MSCIFCQIVKGEIPAQIVYKDEDLVAFKDINPQSPVHILIIPRRHITNLTELDEADTELAGKMILLAGKLAREMDIAESG
YRLVINSGREGGQVVNHLHLHLLGGRQLGGQLG
>Mature_112_residues
SCIFCQIVKGEIPAQIVYKDEDLVAFKDINPQSPVHILIIPRRHITNLTELDEADTELAGKMILLAGKLAREMDIAESGY
RLVINSGREGGQVVNHLHLHLLGGRQLGGQLG

Specific function: Unknown

COG id: COG0537

COG function: function code FGR; Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HIT domain [H]

Homologues:

Organism=Homo sapiens, GI4885413, Length=105, Percent_Identity=43.8095238095238, Blast_Score=108, Evalue=8e-25,
Organism=Homo sapiens, GI14211923, Length=106, Percent_Identity=44.3396226415094, Blast_Score=105, Evalue=1e-23,
Organism=Escherichia coli, GI1787346, Length=111, Percent_Identity=48.6486486486487, Blast_Score=104, Evalue=1e-24,
Organism=Caenorhabditis elegans, GI17506713, Length=106, Percent_Identity=46.2264150943396, Blast_Score=115, Evalue=3e-27,
Organism=Saccharomyces cerevisiae, GI6320078, Length=105, Percent_Identity=34.2857142857143, Blast_Score=67, Evalue=6e-13,
Organism=Drosophila melanogaster, GI28574010, Length=105, Percent_Identity=46.6666666666667, Blast_Score=111, Evalue=9e-26,
Organism=Drosophila melanogaster, GI24581222, Length=105, Percent_Identity=46.6666666666667, Blast_Score=110, Evalue=1e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011146
- InterPro:   IPR011151
- InterPro:   IPR019808
- InterPro:   IPR001310 [H]

Pfam domain/function: PF01230 HIT [H]

EC number: NA

Molecular weight: Translated: 12423; Mature: 12291

Theoretical pI: Translated: 6.34; Mature: 6.34

Prosite motif: PS00892 HIT_1 ; PS51084 HIT_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSCIFCQIVKGEIPAQIVYKDEDLVAFKDINPQSPVHILIIPRRHITNLTELDEADTELA
CCEEEEEEECCCCCEEEEEECCCEEEEECCCCCCCEEEEEECCHHHCCCHHCCCCCHHHH
GKMILLAGKLAREMDIAESGYRLVINSGREGGQVVNHLHLHLLGGRQLGGQLG
CEEEEEEHHHHHHHCCCCCCCEEEEECCCCCCHHEEEEEEEEECCCCCCCCCC
>Mature Secondary Structure 
SCIFCQIVKGEIPAQIVYKDEDLVAFKDINPQSPVHILIIPRRHITNLTELDEADTELA
CEEEEEEECCCCCEEEEEECCCEEEEECCCCCCCEEEEEECCHHHCCCHHCCCCCHHHH
GKMILLAGKLAREMDIAESGYRLVINSGREGGQVVNHLHLHLLGGRQLGGQLG
CEEEEEEHHHHHHHCCCCCCCEEEEECCCCCCHHEEEEEEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]