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The map label for this gene is 57234414

Identifier: 57234414

GI number: 57234414

Start: 719895

End: 720527

Strand: Direct

Name: 57234414

Synonym: DET0783

Alternate gene names: NA

Gene position: 719895-720527 (Clockwise)

Preceding gene: 57234415

Following gene: 57234413

Centisome position: 48.98

GC content: 52.29

Gene sequence:

>633_bases
ATGGAACAGATATCTGACAGCATACGGGAAAATTTTAAAACCCGTGATGCCGCCCGTGAAAAATCCCTGCCTGTCAGCCG
GGAAGCTATCCGCTACTGCAGTCTGGCTATCAGGGCGGTTCACCGCCAGGAACTGGCACAGGCAAGAGAAATGCTGGTTT
CGGCCAAAGCCCTTATTAAGGAGGCCGGGCAGGCTATAGACGCATGCGGGGAATTGTCCAACACCGCGTTTTTCCTTGAT
GCCCAGAAAGAGTACGCCGAAGCCAATACAGTACTGGCTCTGGTGGACGGTAAGGATATGCCCTCGCCACAGGAACTGGA
AGTGGATAATGCCGCCTATTTAAACGGTATTGGCGAAGCGGCAGGTGAACTTAGGCGTTACATACTGGATGGCCTGAGAA
AGGGCGAAGATACCCGCGGCGAAGAGCTGCTTCAGGCTATGGATGATATCTACGAAGTACTGGTTACCATGGATTTCCCG
GATGCCATTACCGGCGGGCTTCGCCGGACTACAGACATGGTTCGGGGTGTGCTGGAACGCACCCGAAGTGATTTAACGTT
ATATATACAGCAAAAGGGGCTTGAGCAAAAGCTGGAAGATTTCCAGTCAAAATTGACCCGGAAAGGGGAGTAA

Upstream 100 bases:

>100_bases
CTGATAAGTGCGGTCTTAGGTGCGCCTGATATTAAAAAGGCTACTTCAGAATTTATAACCCTTATGGAGGCAGCAAAAAT
TGACTAGTATCAGTCTCAAA

Downstream 100 bases:

>100_bases
TTTAGTGTCTATCTGGATTGCATTGGTTGTCGGTTTAGCGGGTCTGGTTGTTGCCGGGCTGCTGGCCAGGTTTGTCCTCC
GGCAAGATGAGGGCATATCT

Product: haloacid dehalogenase superfamily protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 210; Mature: 210

Protein sequence:

>210_residues
MEQISDSIRENFKTRDAAREKSLPVSREAIRYCSLAIRAVHRQELAQAREMLVSAKALIKEAGQAIDACGELSNTAFFLD
AQKEYAEANTVLALVDGKDMPSPQELEVDNAAYLNGIGEAAGELRRYILDGLRKGEDTRGEELLQAMDDIYEVLVTMDFP
DAITGGLRRTTDMVRGVLERTRSDLTLYIQQKGLEQKLEDFQSKLTRKGE

Sequences:

>Translated_210_residues
MEQISDSIRENFKTRDAAREKSLPVSREAIRYCSLAIRAVHRQELAQAREMLVSAKALIKEAGQAIDACGELSNTAFFLD
AQKEYAEANTVLALVDGKDMPSPQELEVDNAAYLNGIGEAAGELRRYILDGLRKGEDTRGEELLQAMDDIYEVLVTMDFP
DAITGGLRRTTDMVRGVLERTRSDLTLYIQQKGLEQKLEDFQSKLTRKGE
>Mature_210_residues
MEQISDSIRENFKTRDAAREKSLPVSREAIRYCSLAIRAVHRQELAQAREMLVSAKALIKEAGQAIDACGELSNTAFFLD
AQKEYAEANTVLALVDGKDMPSPQELEVDNAAYLNGIGEAAGELRRYILDGLRKGEDTRGEELLQAMDDIYEVLVTMDFP
DAITGGLRRTTDMVRGVLERTRSDLTLYIQQKGLEQKLEDFQSKLTRKGE

Specific function: Unknown

COG id: COG2178

COG function: function code J; Predicted RNA-binding protein of the translin family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002848
- InterPro:   IPR016069
- InterPro:   IPR016068 [H]

Pfam domain/function: PF01997 Translin [H]

EC number: NA

Molecular weight: Translated: 23504; Mature: 23504

Theoretical pI: Translated: 4.60; Mature: 4.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEQISDSIRENFKTRDAAREKSLPVSREAIRYCSLAIRAVHRQELAQAREMLVSAKALIK
CCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EAGQAIDACGELSNTAFFLDAQKEYAEANTVLALVDGKDMPSPQELEVDNAAYLNGIGEA
HHHHHHHHHHHHCCCEEEEECHHHHHHHHHEEEEECCCCCCCCCCCCCCCHHHHHHHHHH
AGELRRYILDGLRKGEDTRGEELLQAMDDIYEVLVTMDFPDAITGGLRRTTDMVRGVLER
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
TRSDLTLYIQQKGLEQKLEDFQSKLTRKGE
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MEQISDSIRENFKTRDAAREKSLPVSREAIRYCSLAIRAVHRQELAQAREMLVSAKALIK
CCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EAGQAIDACGELSNTAFFLDAQKEYAEANTVLALVDGKDMPSPQELEVDNAAYLNGIGEA
HHHHHHHHHHHHCCCEEEEECHHHHHHHHHEEEEECCCCCCCCCCCCCCCHHHHHHHHHH
AGELRRYILDGLRKGEDTRGEELLQAMDDIYEVLVTMDFPDAITGGLRRTTDMVRGVLER
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
TRSDLTLYIQQKGLEQKLEDFQSKLTRKGE
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]