| Definition | Dehalococcoides ethenogenes 195, complete genome. |
|---|---|
| Accession | NC_002936 |
| Length | 1,469,720 |
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The map label for this gene is arsB [H]
Identifier: 57234339
GI number: 57234339
Start: 833734
End: 835008
Strand: Direct
Name: arsB [H]
Synonym: DET0908
Alternate gene names: 57234339
Gene position: 833734-835008 (Clockwise)
Preceding gene: 57234342
Following gene: 57234330
Centisome position: 56.73
GC content: 45.73
Gene sequence:
>1275_bases ATGCTCTGGTTGGCTTTATCTATATTCGTTACCACCATTCTGTTAGTGGTATTTAAACCTCGGCCGTTTAACGAAGCCGG GGCTATTTGTTTTGGGGTCTTTTTAATGCTTGTGCTGGGGCTGATTCCCCTGTCAAGTATCGGGCAGACTTTAGCTACCA ACCTGAACATTTTATTTTTCTTCCTCGGGCTCATGCTGGTTAGTTATTTCGCAGAGTTGTCCGGTTTTTTTGATTCGGCC GCTAACTTGGCTCTGAAGCTTTCAAACGGCAGCTCTTGGCGGCTGCTGGGGCTGGTTTTTGCACTGGGTATTGTTATCAC TATGTTTATGTCAAATGATGCCACTGCCCTGCTCTTAACCCCGGTAATTTTTATGCTTGTCCAGCGCTACGGGCTGAAGC CTTTGCCATATGTATTTGCCTGCGCTTTTGTGGCTAACGCAGCCTCATTTATCTTCCCTTTTTCCAATCCGGTAAATCTA CTGGCGGTAGATAAATTCGGCCTTAGCCTAAGTGAATATCTGGGATTTATGTTAATCCCAGCCCTGCTTGCTATTACCAT TATGATAGTCATATTTTACTTTATTTTCCGCCGTGACCTTAAAGCGGGGTTTTCACTGGTAACGGCTAAGGCGGTTGTAG CAAATAATTTTTCTCGCTCGGTCAGGCTGGCATTGGTTTTTCTGGCAATAGGCTGCCTTTTAACTTCGTTTATGGGGTGG CCACTGGCAATCCCTCTTATGCTGACTGCATTTATTCTGATGGGCATAACCCTATTCTATAAAAAAATGGATTTCGGGCA TCTTCGGCAGTCTGTTTCATGGTCAATACTGCCCTTTGTACTGGGATTGGCTTTTATGGTAAACGGATTGGAAAATGCCG GAATTACTTCGGCACTGGGGAATTGGCTTTCCGGCACTATGGCCGGCGACAACCAGCTGGAAACAGGGCTAATTACCTCT TTCGGGACAGCTATCGGTTCTAACCTTATAAATAACTGGCCGATGATGATGGTCTCAGTATCCAGTTTATCCGCCATAAC TGATATCAGCGGCGGCAATGCATGGCTGGTGTATCAGGCTATTTTGGGCGCAGATTTGGGGCCTAATCTGCTGATAATGG GTTCTCTGTCCACCATGCTCTGGCTTATGCTCCTGCGGAAACGGGGGCTGATAATAAAGCCCCTGGATTATACCAGACTG GGTCTTATTATAACCCCGCCGTCTCTGTTGGTATCTACATTTGCCATATTTCAATTAGGAAAACTGAGTAATTAA
Upstream 100 bases:
>100_bases GCTGCCAAGCCCGTTAAAAAGTAACTGGTAATCAACTGATGGTAAAGGGCAGGAGAATCTCTCTCGCATCAAGGGTGATT CTCCTGCATTATTTTTGAAT
Downstream 100 bases:
>100_bases GATGAAAAATATCACTCGCCAGAGTTTAGATAACAGCATCAAAGACGGAGCGGCCTATTCAGCCATGCTGGGGCTGACCC AGGATTATGTAACACCTTTT
Product: arsenical pump membrane protein, putative
Products: ADP; phosphate; arsenite [Periplasm] [C]
Alternate protein names: Arsenic efflux pump protein [H]
Number of amino acids: Translated: 424; Mature: 424
Protein sequence:
>424_residues MLWLALSIFVTTILLVVFKPRPFNEAGAICFGVFLMLVLGLIPLSSIGQTLATNLNILFFFLGLMLVSYFAELSGFFDSA ANLALKLSNGSSWRLLGLVFALGIVITMFMSNDATALLLTPVIFMLVQRYGLKPLPYVFACAFVANAASFIFPFSNPVNL LAVDKFGLSLSEYLGFMLIPALLAITIMIVIFYFIFRRDLKAGFSLVTAKAVVANNFSRSVRLALVFLAIGCLLTSFMGW PLAIPLMLTAFILMGITLFYKKMDFGHLRQSVSWSILPFVLGLAFMVNGLENAGITSALGNWLSGTMAGDNQLETGLITS FGTAIGSNLINNWPMMMVSVSSLSAITDISGGNAWLVYQAILGADLGPNLLIMGSLSTMLWLMLLRKRGLIIKPLDYTRL GLIITPPSLLVSTFAIFQLGKLSN
Sequences:
>Translated_424_residues MLWLALSIFVTTILLVVFKPRPFNEAGAICFGVFLMLVLGLIPLSSIGQTLATNLNILFFFLGLMLVSYFAELSGFFDSA ANLALKLSNGSSWRLLGLVFALGIVITMFMSNDATALLLTPVIFMLVQRYGLKPLPYVFACAFVANAASFIFPFSNPVNL LAVDKFGLSLSEYLGFMLIPALLAITIMIVIFYFIFRRDLKAGFSLVTAKAVVANNFSRSVRLALVFLAIGCLLTSFMGW PLAIPLMLTAFILMGITLFYKKMDFGHLRQSVSWSILPFVLGLAFMVNGLENAGITSALGNWLSGTMAGDNQLETGLITS FGTAIGSNLINNWPMMMVSVSSLSAITDISGGNAWLVYQAILGADLGPNLLIMGSLSTMLWLMLLRKRGLIIKPLDYTRL GLIITPPSLLVSTFAIFQLGKLSN >Mature_424_residues MLWLALSIFVTTILLVVFKPRPFNEAGAICFGVFLMLVLGLIPLSSIGQTLATNLNILFFFLGLMLVSYFAELSGFFDSA ANLALKLSNGSSWRLLGLVFALGIVITMFMSNDATALLLTPVIFMLVQRYGLKPLPYVFACAFVANAASFIFPFSNPVNL LAVDKFGLSLSEYLGFMLIPALLAITIMIVIFYFIFRRDLKAGFSLVTAKAVVANNFSRSVRLALVFLAIGCLLTSFMGW PLAIPLMLTAFILMGITLFYKKMDFGHLRQSVSWSILPFVLGLAFMVNGLENAGITSALGNWLSGTMAGDNQLETGLITS FGTAIGSNLINNWPMMMVSVSSLSAITDISGGNAWLVYQAILGADLGPNLLIMGSLSTMLWLMLLRKRGLIIKPLDYTRL GLIITPPSLLVSTFAIFQLGKLSN
Specific function: Involved in arsenical resistance. Thought to form the channel of an arsenite pump [H]
COG id: COG1055
COG function: function code P; Na+/H+ antiporter NhaD and related arsenite permeases
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ArsB family [H]
Homologues:
Organism=Escherichia coli, GI87082277, Length=423, Percent_Identity=30.2600472813239, Blast_Score=155, Evalue=6e-39,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000802 [H]
Pfam domain/function: PF02040 ArsB [H]
EC number: NA
Molecular weight: Translated: 46113; Mature: 46113
Theoretical pI: Translated: 9.87; Mature: 9.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLWLALSIFVTTILLVVFKPRPFNEAGAICFGVFLMLVLGLIPLSSIGQTLATNLNILFF CHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH FLGLMLVSYFAELSGFFDSAANLALKLSNGSSWRLLGLVFALGIVITMFMSNDATALLLT HHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHH PVIFMLVQRYGLKPLPYVFACAFVANAASFIFPFSNPVNLLAVDKFGLSLSEYLGFMLIP HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHEECCCCCCCEEEEEHHCCCHHHHHHHHHHH ALLAITIMIVIFYFIFRRDLKAGFSLVTAKAVVANNFSRSVRLALVFLAIGCLLTSFMGW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCC PLAIPLMLTAFILMGITLFYKKMDFGHLRQSVSWSILPFVLGLAFMVNGLENAGITSALG HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHH NWLSGTMAGDNQLETGLITSFGTAIGSNLINNWPMMMVSVSSLSAITDISGGNAWLVYQA HHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCEEHHHHH ILGADLGPNLLIMGSLSTMLWLMLLRKRGLIIKPLDYTRLGLIITPPSLLVSTFAIFQLG HHCCCCCCCEEEECCHHHHHHHHHHHHCCCEEECCCCCCEEEEECCHHHHHHHHHHHHHH KLSN CCCC >Mature Secondary Structure MLWLALSIFVTTILLVVFKPRPFNEAGAICFGVFLMLVLGLIPLSSIGQTLATNLNILFF CHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH FLGLMLVSYFAELSGFFDSAANLALKLSNGSSWRLLGLVFALGIVITMFMSNDATALLLT HHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHH PVIFMLVQRYGLKPLPYVFACAFVANAASFIFPFSNPVNLLAVDKFGLSLSEYLGFMLIP HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHEECCCCCCCEEEEEHHCCCHHHHHHHHHHH ALLAITIMIVIFYFIFRRDLKAGFSLVTAKAVVANNFSRSVRLALVFLAIGCLLTSFMGW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCC PLAIPLMLTAFILMGITLFYKKMDFGHLRQSVSWSILPFVLGLAFMVNGLENAGITSALG HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHH NWLSGTMAGDNQLETGLITSFGTAIGSNLINNWPMMMVSVSSLSAITDISGGNAWLVYQA HHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCEEHHHHH ILGADLGPNLLIMGSLSTMLWLMLLRKRGLIIKPLDYTRLGLIITPPSLLVSTFAIFQLG HHCCCCCCCEEEECCHHHHHHHHHHHHCCCEEECCCCCCEEEEECCHHHHHHHHHHHHHH KLSN CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; arsenite [Cytoplasm]; H2O [C]
Specific reaction: ATP + arsenite [Cytoplasm] + H2O = ADP + phosphate + arsenite [Periplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA