| Definition | Dehalococcoides ethenogenes 195, complete genome. |
|---|---|
| Accession | NC_002936 |
| Length | 1,469,720 |
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The map label for this gene is mod [H]
Identifier: 57234105
GI number: 57234105
Start: 1015763
End: 1017526
Strand: Direct
Name: mod [H]
Synonym: DET1112
Alternate gene names: 57234105
Gene position: 1015763-1017526 (Clockwise)
Preceding gene: 57234106
Following gene: 57234104
Centisome position: 69.11
GC content: 44.1
Gene sequence:
>1764_bases ATGGATAAAATGAGAATGGAGTCAGTTGACATGACCGAGAAAAACATCGACAGGATTGCTGCCCTGTTTCCGAATTGCAT CACCGAGACCGTAGACGAGGAGCGCAGCACTCCCGACAAAAAGGTCTACAAGAAGGCGGTTAACTTTGAGCTTCTCCGGC AGATGCTATCCGGTGATGTGCTGGAGGGCGACGAGGCCTATGAGTTTACATGGGTTGGTAAGAAAGCGGCCATAGTCGAA GCCAATAAGCCCATCCGCAAGACTCTGCGTCCGTGCCCAGAGGAGAGTGTAAATTGGGACTCCACAGAGAATTTGTATAT CGAAGGTGACAATCTCGAAGTCCTCAAGCTCATACAGGAGAGCTATATGGGGAAAGTGAAACTAATCTTTATTGATCCGC CATACAATACGGGCAGCGATTTCATCTATGCAGATGACTTTGCAGTTGGCTCAGCGGAGTACAGTGATGAAATTGGTGAG GTGGATGCAGACGGGAATAGACTTTTTAAGAATACAGATTCCAATGGGAGGTTCCATTCTGATTGGTGCTCGATGATGTA TTCAAGGCTCATGCTCGCCAGAAATCTCCTTACAGACGACGGAAGCATTTTTATAAGTATTGATTTTAATGAAGTCGAAA ACCTGAAGAAGATAATGGATGAGGTTTTTGGAGCAGAGAATTTTCAACGAGAAATTGTCTGGAGAATAGGGTGGCTCTCA GGTTATAAAACAATGGCTCCGAATTTCATCCGAAATCATGACACTATTCTGTTTTATTCGAAGAACTCAAGTAAAATTGA GTTCATAAAGAAATATATTGAGAATAAGGATTTCAAGCCTTTGCTTAAGAAAGATGCAAAGGTGACGGCAAAGCTGAAAA GCCTCGGTTTAAGCGACGAACAGCAGAAGGAACTTCTGGAATTTATTAATCATGGAAATCGACCAGAAAGATATCCGATA GAGGATACATGGAATTCGAATGAGTATGATGATTTGAACAGCATTGCAATCGTCTCTTTTTCAGGAGAGAAAATCTCGAA AATTCTCGATGTTGATCAGGATTTTAAAGGACAGAAGTCAGTGAAAATGCTGATGAGAATTATTGAGGCAACGACAAAAG AAGATGACATCGTGATGGATTTCTTTTCCGGAACCGGATCAACGGCTCACGCTGTCATGCAGATGAATGCTGAAGATGGT TGTCATAGGAAGTATATTATGGTGCAGCTTCCTGAACCGTGCGAAGATGGCGGCGCTGCTAAAGAAGCCGGATATGAGAA TATCTGCGAGATTGGAAAGGAGCGAATTCGCAGGATTGGGCAGCGCATCAATGAATCTGCACCGTTGTTCGATTTGGATA CTGGATTCAGAGTGTTCAAGGTTGCAGAAAGTAATATGAATGATGTTTATTATTCTGCTGGGGAATACAATCAGGGAATG CTTTCGATGTTGGAGTCCAATGTGAAATCGGATCGTTCTGACCTCGATCTGCTATTTGGTTGCCTGCTTGAATGGGGATT GCCGCTCTCGATGCCGTACACGTCAGAGCAGATTGAAGGCTGCACAGTTCACACATACAACGATGGCGATCTGATTGCCT GCTTTGATGAGAACATTCCGGATTCTGTTATTAAAACTATCGCCAAGCGTCAGCCGCTCCGCGCAGTTTTTCGCGATAGC AGCTTCGATGGAAGCCCGGCAAAGATCAACGTAGGGGAGATTTTCAAAATGTTGGCACCGGATACGAGGATCAAGGTGAT TTAA
Upstream 100 bases:
>100_bases TTCCTACAAGAGAAACTAAACGAGCTGAAGGGCAATGATGCAGAGTTTGAAAAAATTAGAATAGCTTATAAGAACAGAAA CAAGCAGGAGGAAAGAGCTA
Downstream 100 bases:
>100_bases ACGAGGAGGTGCCTATGATGTGGGTGATACGTGCCGGACAGAACTCCGGATTCTATGACAAATATTTGAGAACGAGCCGT GTTTATATTCCTTGGGACGG
Product: type III restriction-modification system, methylase subunit
Products: NA
Alternate protein names: M.EcoP15I; EcoP15I methyltransferase [H]
Number of amino acids: Translated: 587; Mature: 587
Protein sequence:
>587_residues MDKMRMESVDMTEKNIDRIAALFPNCITETVDEERSTPDKKVYKKAVNFELLRQMLSGDVLEGDEAYEFTWVGKKAAIVE ANKPIRKTLRPCPEESVNWDSTENLYIEGDNLEVLKLIQESYMGKVKLIFIDPPYNTGSDFIYADDFAVGSAEYSDEIGE VDADGNRLFKNTDSNGRFHSDWCSMMYSRLMLARNLLTDDGSIFISIDFNEVENLKKIMDEVFGAENFQREIVWRIGWLS GYKTMAPNFIRNHDTILFYSKNSSKIEFIKKYIENKDFKPLLKKDAKVTAKLKSLGLSDEQQKELLEFINHGNRPERYPI EDTWNSNEYDDLNSIAIVSFSGEKISKILDVDQDFKGQKSVKMLMRIIEATTKEDDIVMDFFSGTGSTAHAVMQMNAEDG CHRKYIMVQLPEPCEDGGAAKEAGYENICEIGKERIRRIGQRINESAPLFDLDTGFRVFKVAESNMNDVYYSAGEYNQGM LSMLESNVKSDRSDLDLLFGCLLEWGLPLSMPYTSEQIEGCTVHTYNDGDLIACFDENIPDSVIKTIAKRQPLRAVFRDS SFDGSPAKINVGEIFKMLAPDTRIKVI
Sequences:
>Translated_587_residues MDKMRMESVDMTEKNIDRIAALFPNCITETVDEERSTPDKKVYKKAVNFELLRQMLSGDVLEGDEAYEFTWVGKKAAIVE ANKPIRKTLRPCPEESVNWDSTENLYIEGDNLEVLKLIQESYMGKVKLIFIDPPYNTGSDFIYADDFAVGSAEYSDEIGE VDADGNRLFKNTDSNGRFHSDWCSMMYSRLMLARNLLTDDGSIFISIDFNEVENLKKIMDEVFGAENFQREIVWRIGWLS GYKTMAPNFIRNHDTILFYSKNSSKIEFIKKYIENKDFKPLLKKDAKVTAKLKSLGLSDEQQKELLEFINHGNRPERYPI EDTWNSNEYDDLNSIAIVSFSGEKISKILDVDQDFKGQKSVKMLMRIIEATTKEDDIVMDFFSGTGSTAHAVMQMNAEDG CHRKYIMVQLPEPCEDGGAAKEAGYENICEIGKERIRRIGQRINESAPLFDLDTGFRVFKVAESNMNDVYYSAGEYNQGM LSMLESNVKSDRSDLDLLFGCLLEWGLPLSMPYTSEQIEGCTVHTYNDGDLIACFDENIPDSVIKTIAKRQPLRAVFRDS SFDGSPAKINVGEIFKMLAPDTRIKVI >Mature_587_residues MDKMRMESVDMTEKNIDRIAALFPNCITETVDEERSTPDKKVYKKAVNFELLRQMLSGDVLEGDEAYEFTWVGKKAAIVE ANKPIRKTLRPCPEESVNWDSTENLYIEGDNLEVLKLIQESYMGKVKLIFIDPPYNTGSDFIYADDFAVGSAEYSDEIGE VDADGNRLFKNTDSNGRFHSDWCSMMYSRLMLARNLLTDDGSIFISIDFNEVENLKKIMDEVFGAENFQREIVWRIGWLS GYKTMAPNFIRNHDTILFYSKNSSKIEFIKKYIENKDFKPLLKKDAKVTAKLKSLGLSDEQQKELLEFINHGNRPERYPI EDTWNSNEYDDLNSIAIVSFSGEKISKILDVDQDFKGQKSVKMLMRIIEATTKEDDIVMDFFSGTGSTAHAVMQMNAEDG CHRKYIMVQLPEPCEDGGAAKEAGYENICEIGKERIRRIGQRINESAPLFDLDTGFRVFKVAESNMNDVYYSAGEYNQGM LSMLESNVKSDRSDLDLLFGCLLEWGLPLSMPYTSEQIEGCTVHTYNDGDLIACFDENIPDSVIKTIAKRQPLRAVFRDS SFDGSPAKINVGEIFKMLAPDTRIKVI
Specific function: Binds the system-specific DNA recognition site 5'- CAGCAC-3'. Necessary for both restriction and methylation (of one of the two A's) [H]
COG id: COG2189
COG function: function code L; Adenine specific DNA methylase Mod
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the N(4)/N(6)-methyltransferase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002295 - InterPro: IPR002941 - InterPro: IPR002052 [H]
Pfam domain/function: PF01555 N6_N4_Mtase [H]
EC number: =2.1.1.72 [H]
Molecular weight: Translated: 66916; Mature: 66916
Theoretical pI: Translated: 4.54; Mature: 4.54
Prosite motif: PS00092 N6_MTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDKMRMESVDMTEKNIDRIAALFPNCITETVDEERSTPDKKVYKKAVNFELLRQMLSGDV CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCHHHHHHHHCCCC LEGDEAYEFTWVGKKAAIVEANKPIRKTLRPCPEESVNWDSTENLYIEGDNLEVLKLIQE CCCCCCEEEEEECCEEEEEECCCCHHHHHCCCCCCCCCCCCCCEEEEECCCHHHHHHHHH SYMGKVKLIFIDPPYNTGSDFIYADDFAVGSAEYSDEIGEVDADGNRLFKNTDSNGRFHS HCCCEEEEEEECCCCCCCCCEEEECCCCCCCCHHHHHCCCCCCCCCEEECCCCCCCCCHH DWCSMMYSRLMLARNLLTDDGSIFISIDFNEVENLKKIMDEVFGAENFQREIVWRIGWLS HHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHC GYKTMAPNFIRNHDTILFYSKNSSKIEFIKKYIENKDFKPLLKKDAKVTAKLKSLGLSDE CCHHHCCHHHCCCCEEEEECCCCCHHHHHHHHHCCCCCCHHHHCCHHHHHHHHHCCCCCH QQKELLEFINHGNRPERYPIEDTWNSNEYDDLNSIAIVSFSGEKISKILDVDQDFKGQKS HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHCCCCCCCCHHH VKMLMRIIEATTKEDDIVMDFFSGTGSTAHAVMQMNAEDGCHRKYIMVQLPEPCEDGGAA HHHHHHHHHHCCCCCCEEEEEECCCCCCEEEEEEECCCCCCCEEEEEEECCCCCCCCCCH KEAGYENICEIGKERIRRIGQRINESAPLFDLDTGFRVFKVAESNMNDVYYSAGEYNQGM HHCCHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCEEEEEECCCCCCEEEECCCCCHHH LSMLESNVKSDRSDLDLLFGCLLEWGLPLSMPYTSEQIEGCTVHTYNDGDLIACFDENIP HHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCEEEEECCCCEEEEECCCCC DSVIKTIAKRQPLRAVFRDSSFDGSPAKINVGEIFKMLAPDTRIKVI HHHHHHHHHCCHHHHHHCCCCCCCCCCEEEHHHHHHHHCCCCEEEEC >Mature Secondary Structure MDKMRMESVDMTEKNIDRIAALFPNCITETVDEERSTPDKKVYKKAVNFELLRQMLSGDV CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCHHHHHHHHCCCC LEGDEAYEFTWVGKKAAIVEANKPIRKTLRPCPEESVNWDSTENLYIEGDNLEVLKLIQE CCCCCCEEEEEECCEEEEEECCCCHHHHHCCCCCCCCCCCCCCEEEEECCCHHHHHHHHH SYMGKVKLIFIDPPYNTGSDFIYADDFAVGSAEYSDEIGEVDADGNRLFKNTDSNGRFHS HCCCEEEEEEECCCCCCCCCEEEECCCCCCCCHHHHHCCCCCCCCCEEECCCCCCCCCHH DWCSMMYSRLMLARNLLTDDGSIFISIDFNEVENLKKIMDEVFGAENFQREIVWRIGWLS HHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHC GYKTMAPNFIRNHDTILFYSKNSSKIEFIKKYIENKDFKPLLKKDAKVTAKLKSLGLSDE CCHHHCCHHHCCCCEEEEECCCCCHHHHHHHHHCCCCCCHHHHCCHHHHHHHHHCCCCCH QQKELLEFINHGNRPERYPIEDTWNSNEYDDLNSIAIVSFSGEKISKILDVDQDFKGQKS HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHCCCCCCCCHHH VKMLMRIIEATTKEDDIVMDFFSGTGSTAHAVMQMNAEDGCHRKYIMVQLPEPCEDGGAA HHHHHHHHHHCCCCCCEEEEEECCCCCCEEEEEEECCCCCCCEEEEEEECCCCCCCCCCH KEAGYENICEIGKERIRRIGQRINESAPLFDLDTGFRVFKVAESNMNDVYYSAGEYNQGM HHCCHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCEEEEEECCCCCCEEEECCCCCHHH LSMLESNVKSDRSDLDLLFGCLLEWGLPLSMPYTSEQIEGCTVHTYNDGDLIACFDENIP HHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCEEEEECCCCEEEEECCCCC DSVIKTIAKRQPLRAVFRDSSFDGSPAKINVGEIFKMLAPDTRIKVI HHHHHHHHHCCHHHHHHCCCCCCCCCCEEEHHHHHHHHCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2837577 [H]