| Definition | Dehalococcoides ethenogenes 195, complete genome. |
|---|---|
| Accession | NC_002936 |
| Length | 1,469,720 |
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The map label for this gene is fabI1 [H]
Identifier: 57233945
GI number: 57233945
Start: 1160518
End: 1161357
Strand: Direct
Name: fabI1 [H]
Synonym: DET1272
Alternate gene names: 57233945
Gene position: 1160518-1161357 (Clockwise)
Preceding gene: 57233947
Following gene: 57233944
Centisome position: 78.96
GC content: 50.36
Gene sequence:
>840_bases ATGACTCAAACGTCTTACGGATTGCTCAAGGGTAAAAAAGGAATTATATTCGGCCCCTTAAACGAGCAAAGTCTGGGCTG GAAAATAGCCCTGGCCTGCCACCGCGAAGGAGCTGAACTGGCTATTTCCAACGTAGCTACCGCCCTTAAAATGGGAAACA CCGCCGAACTGGCCCGCATTTGCGGCCAAGCCCCGCTGCTGGTTGCAGATGCCACCAGCGATGATGAGCTGAAAGCCCTG TTTGCCGGACTAAAAACCAGCCTGGGGGAGATAGATTTTATAGTCCATTCGGTAGGTATGAGCGCCAATATCCGCAAGAA AATACCGTATGAATCTACCAACTATATTTTTTATAACAAAGGGCTGGAGATTTCGGCCATATCCCTGCACAAAATAATCC GTTATGCCCTTGAAGCCGGGGTATTAAAAGACAACGGCAGCATAGTGGCACTGTCTTATATAGGGGCACAAAGGGTATTT TCCCAGTACAACGACATGAACGATGCCAAAGCCCTGCTGGAAGCTATTGCCCGAAATTTCGGTTCCCGCCTGGCAGACCG GGGAATAAGGGTAAACACCGTTTCCCAGTCACCTACCCGCACCTCCGCCGGTTCGGGAATAAGCAATTTTGATGCCATGT ACGAATACGCAAATCTGCTTGCCCCCTTGGGCAATGCCAGCGGGGAAGAATGCGCTGATTATGTGGTAACCCTGCTTTCA GACCTCAGCCGCAAGGTTACCATGCAAAACCTTTATCATGACGGGGGGTTTTCCAGTGTAGGTATTTCCGAAAAACTGCT TGGCCTGCTGGAACGCAGCCAGCCCGAAGCAGGTGTATAA
Upstream 100 bases:
>100_bases TATTTGAATACGGCAGGCGGTATGGACTATAATATAACACACTTTTTATGCATTTTTTATTTTTGTGACAAATTTATAAA ATATTTTGACGGGAGATATT
Downstream 100 bases:
>100_bases TAGCTTAATCCTTTGAAAGAGAGGGTGTGATGGCCAAAAACTTCAGCCGCCTTATGTTTATATCTGTTTTAGTGTTTCTG GTCAGTTTCTTTATCCACCT
Product: enoyl-(acyl-carrier-protein) reductase, putative
Products: NA
Alternate protein names: NADH-dependent enoyl-ACP reductase 1 [H]
Number of amino acids: Translated: 279; Mature: 278
Protein sequence:
>279_residues MTQTSYGLLKGKKGIIFGPLNEQSLGWKIALACHREGAELAISNVATALKMGNTAELARICGQAPLLVADATSDDELKAL FAGLKTSLGEIDFIVHSVGMSANIRKKIPYESTNYIFYNKGLEISAISLHKIIRYALEAGVLKDNGSIVALSYIGAQRVF SQYNDMNDAKALLEAIARNFGSRLADRGIRVNTVSQSPTRTSAGSGISNFDAMYEYANLLAPLGNASGEECADYVVTLLS DLSRKVTMQNLYHDGGFSSVGISEKLLGLLERSQPEAGV
Sequences:
>Translated_279_residues MTQTSYGLLKGKKGIIFGPLNEQSLGWKIALACHREGAELAISNVATALKMGNTAELARICGQAPLLVADATSDDELKAL FAGLKTSLGEIDFIVHSVGMSANIRKKIPYESTNYIFYNKGLEISAISLHKIIRYALEAGVLKDNGSIVALSYIGAQRVF SQYNDMNDAKALLEAIARNFGSRLADRGIRVNTVSQSPTRTSAGSGISNFDAMYEYANLLAPLGNASGEECADYVVTLLS DLSRKVTMQNLYHDGGFSSVGISEKLLGLLERSQPEAGV >Mature_278_residues TQTSYGLLKGKKGIIFGPLNEQSLGWKIALACHREGAELAISNVATALKMGNTAELARICGQAPLLVADATSDDELKALF AGLKTSLGEIDFIVHSVGMSANIRKKIPYESTNYIFYNKGLEISAISLHKIIRYALEAGVLKDNGSIVALSYIGAQRVFS QYNDMNDAKALLEAIARNFGSRLADRGIRVNTVSQSPTRTSAGSGISNFDAMYEYANLLAPLGNASGEECADYVVTLLSD LSRKVTMQNLYHDGGFSSVGISEKLLGLLERSQPEAGV
Specific function: Fatty acid biosynthesis pathway; second reduction step. [C]
COG id: COG0623
COG function: function code I; Enoyl-[acyl-carrier-protein] reductase (NADH)
Gene ontology:
Cell location: Cell inner membrane; Peripheral membrane protein [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family. FabI subfamily [H]
Homologues:
Organism=Escherichia coli, GI1787545, Length=265, Percent_Identity=32.0754716981132, Blast_Score=117, Evalue=7e-28,
Paralogues:
None
Copy number: 200 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 240 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002198 - InterPro: IPR014358 - InterPro: IPR002347 - InterPro: IPR016040 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: =1.3.1.9 [H]
Molecular weight: Translated: 29935; Mature: 29803
Theoretical pI: Translated: 6.93; Mature: 6.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQTSYGLLKGKKGIIFGPLNEQSLGWKIALACHREGAELAISNVATALKMGNTAELARI CCCCCCCHHCCCCCEEECCCCCCCCCEEEEEEEECCCHHHHHHHHHHHHHCCCHHHHHHH CGQAPLLVADATSDDELKALFAGLKTSLGEIDFIVHSVGMSANIRKKIPYESTNYIFYNK HCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCCEEEEEC GLEISAISLHKIIRYALEAGVLKDNGSIVALSYIGAQRVFSQYNDMNDAKALLEAIARNF CCEEEHHHHHHHHHHHHHHCEEECCCCEEEEEHHHHHHHHHHHCCCCHHHHHHHHHHHHH GSRLADRGIRVNTVSQSPTRTSAGSGISNFDAMYEYANLLAPLGNASGEECADYVVTLLS HHHHHHCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH DLSRKVTMQNLYHDGGFSSVGISEKLLGLLERSQPEAGV HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCC >Mature Secondary Structure TQTSYGLLKGKKGIIFGPLNEQSLGWKIALACHREGAELAISNVATALKMGNTAELARI CCCCCCHHCCCCCEEECCCCCCCCCEEEEEEEECCCHHHHHHHHHHHHHCCCHHHHHHH CGQAPLLVADATSDDELKALFAGLKTSLGEIDFIVHSVGMSANIRKKIPYESTNYIFYNK HCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCCEEEEEC GLEISAISLHKIIRYALEAGVLKDNGSIVALSYIGAQRVFSQYNDMNDAKALLEAIARNF CCEEEHHHHHHHHHHHHHHCEEECCCCEEEEEHHHHHHHHHHHCCCCHHHHHHHHHHHHH GSRLADRGIRVNTVSQSPTRTSAGSGISNFDAMYEYANLLAPLGNASGEECADYVVTLLS HHHHHHCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH DLSRKVTMQNLYHDGGFSSVGISEKLLGLLERSQPEAGV HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11481430 [H]