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The map label for this gene is yxjL [H]

Identifier: 57233907

GI number: 57233907

Start: 1219838

End: 1220515

Strand: Direct

Name: yxjL [H]

Synonym: DET1350

Alternate gene names: 57233907

Gene position: 1219838-1220515 (Clockwise)

Preceding gene: 57233908

Following gene: 57233906

Centisome position: 83.0

GC content: 48.97

Gene sequence:

>678_bases
ATGGAAGACAACAGTAAGATCAGGGTAATGGTCATAGATGAGCAACCTTTTTTCAGGGCGGGTGTTGCCCAGGCCTTATC
CGACAACAACTTTGAGATACTCCCAACCGATACCCACAGAGACCCAATGGAACAGATTGAGAGCAGCCTGCCGGATGTGG
TACTTTTGGGTTCAGACCTGGTGGCGTACAGCGGGCTAGATTTGGGCAGGCGGATTGTACGCACCTTCCCCAATACCAAG
GTTATTATCCTTTCCCCAAACCCGAATGATACCGAGCTGTTTGAATGCATCAGGACAGCGGCTGTGGCCTGTTTGAAAAA
AAGCAGCACGGCTGATGAGCTTATTGAGACTATCCGCCGGGCTAACCGGGGAGAATACCCTATAAATGAAAGCCTGATGA
CCAGCCCCAACCTGGCCAAACAGGTGCTGGCCCAGTTTCAAGACGTATCCCTGCTGGGCAAAGATGCTTCCAATTTCGTT
ACCCCTTTAACCAACCGCAAAAAACAGATACTGACCCTTATTGCCAATGGCAATACCAACAAACAGATTGCCAACAATCT
GGAAATAAGTGAACAGACCATAAAGAACCACGTCAGCGCCATTTTACGCAAATTGAACGCTAATGACCGGGCACACGCTG
TTGTAGTGGCCATCCGCTGCGGCTTGATAAATATATAA

Upstream 100 bases:

>100_bases
TGACCGGCGTTTCCGCAAGGAAGATGTGGAACAATTTTTGGAGCGGGAAGGCAAGACCAAATCCCTCAAAGAAACTTAAA
GCTAAAAAAAGAGGCGGGCA

Downstream 100 bases:

>100_bases
ATTTGGCTTATTTTTGACAAATAGTTGCACCTTTAGGTGAATTATGCGTAAGATATGATAAGTAACTGGATAAAAAGCCA
ATAAACAAGCTGGAATGTAG

Product: LuxR family DNA-binding response regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 225; Mature: 225

Protein sequence:

>225_residues
MEDNSKIRVMVIDEQPFFRAGVAQALSDNNFEILPTDTHRDPMEQIESSLPDVVLLGSDLVAYSGLDLGRRIVRTFPNTK
VIILSPNPNDTELFECIRTAAVACLKKSSTADELIETIRRANRGEYPINESLMTSPNLAKQVLAQFQDVSLLGKDASNFV
TPLTNRKKQILTLIANGNTNKQIANNLEISEQTIKNHVSAILRKLNANDRAHAVVVAIRCGLINI

Sequences:

>Translated_225_residues
MEDNSKIRVMVIDEQPFFRAGVAQALSDNNFEILPTDTHRDPMEQIESSLPDVVLLGSDLVAYSGLDLGRRIVRTFPNTK
VIILSPNPNDTELFECIRTAAVACLKKSSTADELIETIRRANRGEYPINESLMTSPNLAKQVLAQFQDVSLLGKDASNFV
TPLTNRKKQILTLIANGNTNKQIANNLEISEQTIKNHVSAILRKLNANDRAHAVVVAIRCGLINI
>Mature_225_residues
MEDNSKIRVMVIDEQPFFRAGVAQALSDNNFEILPTDTHRDPMEQIESSLPDVVLLGSDLVAYSGLDLGRRIVRTFPNTK
VIILSPNPNDTELFECIRTAAVACLKKSSTADELIETIRRANRGEYPINESLMTSPNLAKQVLAQFQDVSLLGKDASNFV
TPLTNRKKQILTLIANGNTNKQIANNLEISEQTIKNHVSAILRKLNANDRAHAVVVAIRCGLINI

Specific function: Probable member of the two-component regulatory system yxjM/yxjL [H]

COG id: COG2197

COG function: function code TK; Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1788521, Length=221, Percent_Identity=29.8642533936652, Blast_Score=86, Evalue=2e-18,
Organism=Escherichia coli, GI1788222, Length=221, Percent_Identity=24.8868778280543, Blast_Score=69, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001789
- InterPro:   IPR011990
- InterPro:   IPR000792
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00196 GerE; PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 24892; Mature: 24892

Theoretical pI: Translated: 6.78; Mature: 6.78

Prosite motif: PS50110 RESPONSE_REGULATORY ; PS00622 HTH_LUXR_1 ; PS50043 HTH_LUXR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEDNSKIRVMVIDEQPFFRAGVAQALSDNNFEILPTDTHRDPMEQIESSLPDVVLLGSDL
CCCCCEEEEEEECCCCHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHCCCCEEEECCCH
VAYSGLDLGRRIVRTFPNTKVIILSPNPNDTELFECIRTAAVACLKKSSTADELIETIRR
HHHCCHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
ANRGEYPINESLMTSPNLAKQVLAQFQDVSLLGKDASNFVTPLTNRKKQILTLIANGNTN
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCEEEEEEEECCCCC
KQIANNLEISEQTIKNHVSAILRKLNANDRAHAVVVAIRCGLINI
HHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHEEEEEEECCCCCC
>Mature Secondary Structure
MEDNSKIRVMVIDEQPFFRAGVAQALSDNNFEILPTDTHRDPMEQIESSLPDVVLLGSDL
CCCCCEEEEEEECCCCHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHCCCCEEEECCCH
VAYSGLDLGRRIVRTFPNTKVIILSPNPNDTELFECIRTAAVACLKKSSTADELIETIRR
HHHCCHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
ANRGEYPINESLMTSPNLAKQVLAQFQDVSLLGKDASNFVTPLTNRKKQILTLIANGNTN
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCEEEEEEEECCCCC
KQIANNLEISEQTIKNHVSAILRKLNANDRAHAVVVAIRCGLINI
HHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHEEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8978088; 8969509; 9384377 [H]