Click here to switch to the map view.

The map label for this gene is 57233891

Identifier: 57233891

GI number: 57233891

Start: 1228413

End: 1229870

Strand: Direct

Name: 57233891

Synonym: DET1358

Alternate gene names: NA

Gene position: 1228413-1229870 (Clockwise)

Preceding gene: 57233892

Following gene: 57233890

Centisome position: 83.58

GC content: 49.18

Gene sequence:

>1458_bases
ATGGCTAAAACAACTACGCTCTATATTGAAGATGCCGCAATAAAGGTCCTTGTAAACAACGGTAAAAAGGTTGAAAAATG
GGCCAGCGCCCCCCTTGAAGCCGGGCTGGTTATAGATGGCTTGATTCAGGATGAAACCAAGGTATCAGAGGAGATAAAAT
CTTTATTTTCCCGTGAGAAGATACCCACCGGCAGAGTGATAGCGGCCATGAGCGGCCTTAAATCTATCTTCCGGATTATC
AGCTTGCCGGCCGTACCAAAGAATATACTTGACGAAGCTATTAAAAACGAAGCTAACCGGGTAATTCCCACCCCTATGGA
CCAGAATTACCTGTCTTACCAGGTACTTCCCTCCGCTCAGGGTGAAGTAAAGGTATTTATAGTAGCCCACCCCAAAAACA
CCACTGATTCGGTAATAAAAACCATAAACAAAGCCGGCCTCAGGCTGGAGGTACTGGATATTGCCCCGCTGGCCCTTTGC
CGCTGTGCCAATCTGGAAAAGGTTATTATTGTAAGCAACTGGCTGGATAACGTGGATATTGCCGTCATTATAGGCCGCAT
TCCGGAGGTTATCCGCAGCCTGTCACTGCCGGTTGAAAGCCAGTCTGTTGCCGAACGGATAAGCACCATTGCCGAGGAAC
TGAACCGGACCATCACCTTTTACAATTCCAGCCATGCTGAAAGCCCGCTGGATGAAAGCGTACCGGTACTGGTATCCGGC
GAACTGGCCAATGAACAGGATTCGTGGTCTTCTCTGCTGGATGAGCTGAGCAACCAGATTTCCAGCCTGCCCTCGCCCTT
TATTGCCGGTGAAGGCTTTGACCCCAGTGTTTATATTGTAAATATGGGTATGGCCCTCCGGGCGCTGCCGGCCGGAACTG
AACACCAGAATTCGCTAATCAATATTAACGCCATGCCGGGTTTTTACAAACCCAAAGGCACTTCCCTGGCGTCTATCCTG
GTGCCCACAGTCATAGTTCTGCTGGTGGGCGGCCTGGTTTGGGGCTGGTTTTATATTGATGATATGAAGCAAAAGAACAA
CGTCTTAGAGCCGCAGGTGCAGGAGCAGGAAGCTACCCTGATACAAAAAAGAGCCGAACTTTCAGCCCTTAACAGCCAGA
TTGCGGAAACCCAAAAATCTCTGGACGCCGCCAACCCGGTGGTAACCGCCCTGAACGATATGCTCTGGGATATGTATCAG
GGAAGAGAGGCCATCACCGGGGATTATAAAGCCATTTACAACCTGCACTCCAGCAATATTGCCCTTTCTACTATTGATTT
TGACGGTGAAAGTATTACGGTTACAGGTTACGGCCTGACCAAGACGGCTGTGCTGGAATATGCCGGCATACTCCGCGGCA
GCAACCGCTGGCTGGATGTAGTGGTAATCAGCATGGACAAGATACTGACCGAAGACCCGAATATGCCTATATACAGTTTT
AATTTCCTTTTGAAATAA

Upstream 100 bases:

>100_bases
TGATAAAGCTGACCTTTGATACCATCACCGCTGAGGATGATTTGCCCAAACCTACCACTACTATTACTCTTTTACTGATA
AGTTACGAGGGTTAAATAAG

Downstream 100 bases:

>100_bases
ACTAGTCTGGTAAAACATGGACGTTATAAAACTTATCTACGAAGCCGAAGAAAAAAAAGGCTCTGACCTGCATCTGGTAG
CCCAAAGCCCGCCGCTGGTG

Product: type IV pilus assembly family protein

Products: NA

Alternate protein names: Type IV Pilus Assembly Family Protein; Type 4 Fimbrial Biogenesis Protein PilM; Tfp Pilus Assembly Protein ATPase; Competence Protein PilM; Type IV Pilus Assembly Protein

Number of amino acids: Translated: 485; Mature: 484

Protein sequence:

>485_residues
MAKTTTLYIEDAAIKVLVNNGKKVEKWASAPLEAGLVIDGLIQDETKVSEEIKSLFSREKIPTGRVIAAMSGLKSIFRII
SLPAVPKNILDEAIKNEANRVIPTPMDQNYLSYQVLPSAQGEVKVFIVAHPKNTTDSVIKTINKAGLRLEVLDIAPLALC
RCANLEKVIIVSNWLDNVDIAVIIGRIPEVIRSLSLPVESQSVAERISTIAEELNRTITFYNSSHAESPLDESVPVLVSG
ELANEQDSWSSLLDELSNQISSLPSPFIAGEGFDPSVYIVNMGMALRALPAGTEHQNSLININAMPGFYKPKGTSLASIL
VPTVIVLLVGGLVWGWFYIDDMKQKNNVLEPQVQEQEATLIQKRAELSALNSQIAETQKSLDAANPVVTALNDMLWDMYQ
GREAITGDYKAIYNLHSSNIALSTIDFDGESITVTGYGLTKTAVLEYAGILRGSNRWLDVVVISMDKILTEDPNMPIYSF
NFLLK

Sequences:

>Translated_485_residues
MAKTTTLYIEDAAIKVLVNNGKKVEKWASAPLEAGLVIDGLIQDETKVSEEIKSLFSREKIPTGRVIAAMSGLKSIFRII
SLPAVPKNILDEAIKNEANRVIPTPMDQNYLSYQVLPSAQGEVKVFIVAHPKNTTDSVIKTINKAGLRLEVLDIAPLALC
RCANLEKVIIVSNWLDNVDIAVIIGRIPEVIRSLSLPVESQSVAERISTIAEELNRTITFYNSSHAESPLDESVPVLVSG
ELANEQDSWSSLLDELSNQISSLPSPFIAGEGFDPSVYIVNMGMALRALPAGTEHQNSLININAMPGFYKPKGTSLASIL
VPTVIVLLVGGLVWGWFYIDDMKQKNNVLEPQVQEQEATLIQKRAELSALNSQIAETQKSLDAANPVVTALNDMLWDMYQ
GREAITGDYKAIYNLHSSNIALSTIDFDGESITVTGYGLTKTAVLEYAGILRGSNRWLDVVVISMDKILTEDPNMPIYSF
NFLLK
>Mature_484_residues
AKTTTLYIEDAAIKVLVNNGKKVEKWASAPLEAGLVIDGLIQDETKVSEEIKSLFSREKIPTGRVIAAMSGLKSIFRIIS
LPAVPKNILDEAIKNEANRVIPTPMDQNYLSYQVLPSAQGEVKVFIVAHPKNTTDSVIKTINKAGLRLEVLDIAPLALCR
CANLEKVIIVSNWLDNVDIAVIIGRIPEVIRSLSLPVESQSVAERISTIAEELNRTITFYNSSHAESPLDESVPVLVSGE
LANEQDSWSSLLDELSNQISSLPSPFIAGEGFDPSVYIVNMGMALRALPAGTEHQNSLININAMPGFYKPKGTSLASILV
PTVIVLLVGGLVWGWFYIDDMKQKNNVLEPQVQEQEATLIQKRAELSALNSQIAETQKSLDAANPVVTALNDMLWDMYQG
REAITGDYKAIYNLHSSNIALSTIDFDGESITVTGYGLTKTAVLEYAGILRGSNRWLDVVVISMDKILTEDPNMPIYSFN
FLLK

Specific function: Unknown

COG id: COG4972

COG function: function code NU; Tfp pilus assembly protein, ATPase PilM

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 53158; Mature: 53027

Theoretical pI: Translated: 4.60; Mature: 4.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKTTTLYIEDAAIKVLVNNGKKVEKWASAPLEAGLVIDGLIQDETKVSEEIKSLFSREK
CCCEEEEEEECCEEEEEECCCCHHHHHHCCCCCCCEEEECHHCCHHHHHHHHHHHHHHCC
IPTGRVIAAMSGLKSIFRIISLPAVPKNILDEAIKNEANRVIPTPMDQNYLSYQVLPSAQ
CCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCC
GEVKVFIVAHPKNTTDSVIKTINKAGLRLEVLDIAPLALCRCANLEKVIIVSNWLDNVDI
CCEEEEEEECCCCCHHHHHHHHHHCCCEEEEECCCHHHHHHHCCCCEEEEEECCCCCCCC
AVIIGRIPEVIRSLSLPVESQSVAERISTIAEELNRTITFYNSSHAESPLDESVPVLVSG
EEEHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCEEEEC
ELANEQDSWSSLLDELSNQISSLPSPFIAGEGFDPSVYIVNMGMALRALPAGTEHQNSLI
CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCHHHHCCCCCCCCCCCEE
NINAMPGFYKPKGTSLASILVPTVIVLLVGGLVWGWFYIDDMKQKNNVLEPQVQEQEATL
EEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEECHHHCCCCCCCCHHHHHHHH
IQKRAELSALNSQIAETQKSLDAANPVVTALNDMLWDMYQGREAITGDYKAIYNLHSSNI
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHCCCHHHHEEECCCCE
ALSTIDFDGESITVTGYGLTKTAVLEYAGILRGSNRWLDVVVISMDKILTEDPNMPIYSF
EEEEEECCCCEEEEEECCCHHHHHHHHHHHHCCCCCEEEEEEEEHHHHHCCCCCCCEEEE
NFLLK
EEEEC
>Mature Secondary Structure 
AKTTTLYIEDAAIKVLVNNGKKVEKWASAPLEAGLVIDGLIQDETKVSEEIKSLFSREK
CCEEEEEEECCEEEEEECCCCHHHHHHCCCCCCCEEEECHHCCHHHHHHHHHHHHHHCC
IPTGRVIAAMSGLKSIFRIISLPAVPKNILDEAIKNEANRVIPTPMDQNYLSYQVLPSAQ
CCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCC
GEVKVFIVAHPKNTTDSVIKTINKAGLRLEVLDIAPLALCRCANLEKVIIVSNWLDNVDI
CCEEEEEEECCCCCHHHHHHHHHHCCCEEEEECCCHHHHHHHCCCCEEEEEECCCCCCCC
AVIIGRIPEVIRSLSLPVESQSVAERISTIAEELNRTITFYNSSHAESPLDESVPVLVSG
EEEHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCEEEEC
ELANEQDSWSSLLDELSNQISSLPSPFIAGEGFDPSVYIVNMGMALRALPAGTEHQNSLI
CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCHHHHCCCCCCCCCCCEE
NINAMPGFYKPKGTSLASILVPTVIVLLVGGLVWGWFYIDDMKQKNNVLEPQVQEQEATL
EEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEECHHHCCCCCCCCHHHHHHHH
IQKRAELSALNSQIAETQKSLDAANPVVTALNDMLWDMYQGREAITGDYKAIYNLHSSNI
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHCCCHHHHEEECCCCE
ALSTIDFDGESITVTGYGLTKTAVLEYAGILRGSNRWLDVVVISMDKILTEDPNMPIYSF
EEEEEECCCCEEEEEECCCHHHHHHHHHHHHCCCCCEEEEEEEEHHHHHCCCCCCCEEEE
NFLLK
EEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA