| Definition | Dehalococcoides ethenogenes 195, complete genome. |
|---|---|
| Accession | NC_002936 |
| Length | 1,469,720 |
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The map label for this gene is 57233879
Identifier: 57233879
GI number: 57233879
Start: 1234841
End: 1235341
Strand: Direct
Name: 57233879
Synonym: DET1364
Alternate gene names: NA
Gene position: 1234841-1235341 (Clockwise)
Preceding gene: 57233880
Following gene: 57233878
Centisome position: 84.02
GC content: 52.3
Gene sequence:
>501_bases ATGACCCACATAAAAAGCCCTCTGGCTCTGGAATTCGCCGGTTTCTGGCGGCGGTTCGGGGCATTTATTATAGACGATAT AATTATCAGCCTTACTTCCCTGGCCTTTGTGCCTGTGCACTGGTTTGAAATACCTGTTTTCTGGAATATAGACAGCCTGT CCGGCATCTGGTGGCTGGTAGCCCCGGTCAGCGCATTTACCAATGTGCTTTCTTTATCAGTCATGGTGGCTTACTTTGTG TTTTTCTGGTACTGGCGGGGACAGACCATCGGCATGATGGCCGCCCAGATAAAAGTTATCAGGACAGACGGTTCCGGGGT TTCGCTGGGAAACTCACTCATCCGTTTTGCGGGGCTTATTCTGGCCAGCCTGCCTTTAGGGCTGGGGCTTTTCTGGATTG CCTGTGACCGACGCAGACAAGGCTGGCATGATAAAATGGCTGATACCGTGGTAGTAAAACTGCCCAAACCCCCTGAAGTG ACCGCCCCCCAGGCTACCTGA
Upstream 100 bases:
>100_bases ATTCAGGTGGAATCCGACCTTGCCTTTGGGTTACTAGGATTAAGCCCCATTTAGATGTATAATACCCACAGCCAAATCTG GCGGGAGTGTGACATCAAAA
Downstream 100 bases:
>100_bases AAATAAATATTTAAACAGCCGCAATACCCGGCAGGCTGTACTTATAAGGCAGGAACAAGATGACAAACGAAGTAAGAGTA CGCTACGCCCCCAGTCCCAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 166; Mature: 165
Protein sequence:
>166_residues MTHIKSPLALEFAGFWRRFGAFIIDDIIISLTSLAFVPVHWFEIPVFWNIDSLSGIWWLVAPVSAFTNVLSLSVMVAYFV FFWYWRGQTIGMMAAQIKVIRTDGSGVSLGNSLIRFAGLILASLPLGLGLFWIACDRRRQGWHDKMADTVVVKLPKPPEV TAPQAT
Sequences:
>Translated_166_residues MTHIKSPLALEFAGFWRRFGAFIIDDIIISLTSLAFVPVHWFEIPVFWNIDSLSGIWWLVAPVSAFTNVLSLSVMVAYFV FFWYWRGQTIGMMAAQIKVIRTDGSGVSLGNSLIRFAGLILASLPLGLGLFWIACDRRRQGWHDKMADTVVVKLPKPPEV TAPQAT >Mature_165_residues THIKSPLALEFAGFWRRFGAFIIDDIIISLTSLAFVPVHWFEIPVFWNIDSLSGIWWLVAPVSAFTNVLSLSVMVAYFVF FWYWRGQTIGMMAAQIKVIRTDGSGVSLGNSLIRFAGLILASLPLGLGLFWIACDRRRQGWHDKMADTVVVKLPKPPEVT APQAT
Specific function: Unknown
COG id: COG1714
COG function: function code S; Predicted membrane protein/domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18629; Mature: 18498
Theoretical pI: Translated: 9.79; Mature: 9.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTHIKSPLALEFAGFWRRFGAFIIDDIIISLTSLAFVPVHWFEIPVFWNIDSLSGIWWLV CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEECCCCCCHHHHHH APVSAFTNVLSLSVMVAYFVFFWYWRGQTIGMMAAQIKVIRTDGSGVSLGNSLIRFAGLI HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHEEEEEEEEEEECCCCCHHHHHHHHHHHHH LASLPLGLGLFWIACDRRRQGWHDKMADTVVVKLPKPPEVTAPQAT HHHHHHHHHHHEEEECCCCCCCHHHCCCEEEEECCCCCCCCCCCCC >Mature Secondary Structure THIKSPLALEFAGFWRRFGAFIIDDIIISLTSLAFVPVHWFEIPVFWNIDSLSGIWWLV CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEECCCCCCHHHHHH APVSAFTNVLSLSVMVAYFVFFWYWRGQTIGMMAAQIKVIRTDGSGVSLGNSLIRFAGLI HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHEEEEEEEEEEECCCCCHHHHHHHHHHHHH LASLPLGLGLFWIACDRRRQGWHDKMADTVVVKLPKPPEVTAPQAT HHHHHHHHHHHEEEECCCCCCCHHHCCCEEEEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA