| Definition | Dehalococcoides ethenogenes 195, complete genome. |
|---|---|
| Accession | NC_002936 |
| Length | 1,469,720 |
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The map label for this gene is gltX [H]
Identifier: 57233878
GI number: 57233878
Start: 1235401
End: 1236855
Strand: Direct
Name: gltX [H]
Synonym: DET1365
Alternate gene names: 57233878
Gene position: 1235401-1236855 (Clockwise)
Preceding gene: 57233879
Following gene: 57233876
Centisome position: 84.06
GC content: 52.03
Gene sequence:
>1455_bases ATGACAAACGAAGTAAGAGTACGCTACGCCCCCAGTCCCACCGGCTACCCCCATCTGGGCAATATCCGCACTGCTATGTT CAACTGGCTCTTTGCCAGACACAATGGCGGCAAGTTTATTGTCCGGATAGAAGATACTGACCGCGAACGCTACGTGGAAG GGGCGGTGGAATCTATACTGGAAAGCCTGAACTGGCTGGGGCTTGACTGGGACGAAGGCCCGGACAAAGGCGGAGACTAC GGCCCGTACTATCAGTCTGAAAGGCTTTTCCTTTACCGCCAGGCGGCTGAAAGGCTGGTTACCGAGGGCAAAGCCTACTA CTGCCATTGTTCTTCCGAAAGGCTGGATAAAATGCGGGAAGAGCAGATAGCCCGCAAAGAACCCCCGGGTTATGACCGCT GCTGCCGTGATTTATGCCTGGGACAAAAAGAGGGGGCGGTTATCCGCTTTAAAATACCCCTTGAAGGACAGACCACATTT ATAGACCTGATACGCGGTGAAGTAACCTTTGACAACGCCAAACAGGATGACTTTGTTATCTTGAAATCAGACGGCTTTCC CACCTACCATCTGGCCAGTGTGGTAGATGACCATGCCATGCAGATAAGCCATGTCCTGCGGGCGGAAGAATGGCTACCCT CCACTCCCAAGCACCTTATGCTGTATAAGGCACTGGGCTATACCCCACCCCAATATGCCCATTTGCCCATGATACTGGGA CCTGACCGCTCCAAACTTTCCAAGCGGCACGGGGCAACTTCTACTATAGAATACAAACAGGCAGGCTACCTGCCTGAAAC TATGGTAAATTTCTTGTCCCTGCTAGGCTGGGCTTATGATGACAAGACCGAACTATTCAGCCGGAAGCAGCTGATAGAGT ATTTCTGTCTGGAAAAGGTAAGCAAGACTGCCGCCATTTTCAACTATGAAAAGCTGGACTGGATGAACGGCATGTATATC CGTACCCTTTCCGCCCCGGACCTTGCCAGCCGGGCTATACCCTTTCTGGAAAAAGACGAACGGATTGCCGCATCCGGGCG TTTAAATTTTGACTATACCACCAAAGTAATGCCCCTGATACAGGAAAGGGTCAAAAAACTAAGTGAGCTGGCAGAGCTTT GCTGGTTTATCTATTCGGACAATATCAGCTATGACCCGGCTTCGCTTATTGATAAGAAACTGACCAAAGATGAAAGCCTC TGTGCCTTGAAAGCGGCCTTTGCCCGGCTGGAAGCCCTGGCAAACTTTGATGCCGTAAGTATGGAGGAACATATCCGTCC GCTGGCTGCCGAACTGGAACTAAAACCGGGGCAGCTATTCGGTATGCTCCGCACCGCATCCACCGGCCAGCAGGTTGCCC CTCCCCTTTTTCAGACAATGGAGGTGCTGGGCAGGGAAAGATGCCTGGGGCGGATAGCCATGGCTATTGCCAGACTGTCT GAGCTGCCTTCTTAG
Upstream 100 bases:
>100_bases TGCCCAAACCCCCTGAAGTGACCGCCCCCCAGGCTACCTGAAAATAAATATTTAAACAGCCGCAATACCCGGCAGGCTGT ACTTATAAGGCAGGAACAAG
Downstream 100 bases:
>100_bases CGGAGTAAAACAGATAGCAAAGGGTCAGGCCAAAAATGCTCCTGCCGGCTGTCATTTTGGATGCCTGCCGCCAAGAAAGC GGGCTAAAAAGCATGGCCGC
Product: glutamyl-tRNA synthetase
Products: NA
Alternate protein names: Glutamate--tRNA ligase; GluRS [H]
Number of amino acids: Translated: 484; Mature: 483
Protein sequence:
>484_residues MTNEVRVRYAPSPTGYPHLGNIRTAMFNWLFARHNGGKFIVRIEDTDRERYVEGAVESILESLNWLGLDWDEGPDKGGDY GPYYQSERLFLYRQAAERLVTEGKAYYCHCSSERLDKMREEQIARKEPPGYDRCCRDLCLGQKEGAVIRFKIPLEGQTTF IDLIRGEVTFDNAKQDDFVILKSDGFPTYHLASVVDDHAMQISHVLRAEEWLPSTPKHLMLYKALGYTPPQYAHLPMILG PDRSKLSKRHGATSTIEYKQAGYLPETMVNFLSLLGWAYDDKTELFSRKQLIEYFCLEKVSKTAAIFNYEKLDWMNGMYI RTLSAPDLASRAIPFLEKDERIAASGRLNFDYTTKVMPLIQERVKKLSELAELCWFIYSDNISYDPASLIDKKLTKDESL CALKAAFARLEALANFDAVSMEEHIRPLAAELELKPGQLFGMLRTASTGQQVAPPLFQTMEVLGRERCLGRIAMAIARLS ELPS
Sequences:
>Translated_484_residues MTNEVRVRYAPSPTGYPHLGNIRTAMFNWLFARHNGGKFIVRIEDTDRERYVEGAVESILESLNWLGLDWDEGPDKGGDY GPYYQSERLFLYRQAAERLVTEGKAYYCHCSSERLDKMREEQIARKEPPGYDRCCRDLCLGQKEGAVIRFKIPLEGQTTF IDLIRGEVTFDNAKQDDFVILKSDGFPTYHLASVVDDHAMQISHVLRAEEWLPSTPKHLMLYKALGYTPPQYAHLPMILG PDRSKLSKRHGATSTIEYKQAGYLPETMVNFLSLLGWAYDDKTELFSRKQLIEYFCLEKVSKTAAIFNYEKLDWMNGMYI RTLSAPDLASRAIPFLEKDERIAASGRLNFDYTTKVMPLIQERVKKLSELAELCWFIYSDNISYDPASLIDKKLTKDESL CALKAAFARLEALANFDAVSMEEHIRPLAAELELKPGQLFGMLRTASTGQQVAPPLFQTMEVLGRERCLGRIAMAIARLS ELPS >Mature_483_residues TNEVRVRYAPSPTGYPHLGNIRTAMFNWLFARHNGGKFIVRIEDTDRERYVEGAVESILESLNWLGLDWDEGPDKGGDYG PYYQSERLFLYRQAAERLVTEGKAYYCHCSSERLDKMREEQIARKEPPGYDRCCRDLCLGQKEGAVIRFKIPLEGQTTFI DLIRGEVTFDNAKQDDFVILKSDGFPTYHLASVVDDHAMQISHVLRAEEWLPSTPKHLMLYKALGYTPPQYAHLPMILGP DRSKLSKRHGATSTIEYKQAGYLPETMVNFLSLLGWAYDDKTELFSRKQLIEYFCLEKVSKTAAIFNYEKLDWMNGMYIR TLSAPDLASRAIPFLEKDERIAASGRLNFDYTTKVMPLIQERVKKLSELAELCWFIYSDNISYDPASLIDKKLTKDESLC ALKAAFARLEALANFDAVSMEEHIRPLAAELELKPGQLFGMLRTASTGQQVAPPLFQTMEVLGRERCLGRIAMAIARLSE LPS
Specific function: Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction:glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) [H]
COG id: COG0008
COG function: function code J; Glutamyl- and glutaminyl-tRNA synthetases
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I aminoacyl-tRNA synthetase family [H]
Homologues:
Organism=Homo sapiens, GI134288884, Length=489, Percent_Identity=35.9918200408998, Blast_Score=291, Evalue=8e-79, Organism=Escherichia coli, GI1788743, Length=480, Percent_Identity=40.4166666666667, Blast_Score=369, Evalue=1e-103, Organism=Escherichia coli, GI226510925, Length=288, Percent_Identity=34.7222222222222, Blast_Score=150, Evalue=2e-37, Organism=Caenorhabditis elegans, GI71993394, Length=485, Percent_Identity=37.7319587628866, Blast_Score=290, Evalue=9e-79, Organism=Saccharomyces cerevisiae, GI6324540, Length=501, Percent_Identity=34.1317365269461, Blast_Score=284, Evalue=3e-77, Organism=Saccharomyces cerevisiae, GI6324742, Length=142, Percent_Identity=34.5070422535211, Blast_Score=74, Evalue=4e-14, Organism=Saccharomyces cerevisiae, GI6321192, Length=235, Percent_Identity=27.2340425531915, Blast_Score=69, Evalue=2e-12, Organism=Drosophila melanogaster, GI24665321, Length=495, Percent_Identity=36.5656565656566, Blast_Score=315, Evalue=4e-86,
Paralogues:
None
Copy number: 1,800 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008925 - InterPro: IPR020751 - InterPro: IPR001412 - InterPro: IPR004527 - InterPro: IPR000924 - InterPro: IPR020061 - InterPro: IPR020058 - InterPro: IPR014729 [H]
Pfam domain/function: PF00749 tRNA-synt_1c [H]
EC number: =6.1.1.17 [H]
Molecular weight: Translated: 55257; Mature: 55126
Theoretical pI: Translated: 6.37; Mature: 6.37
Prosite motif: PS00178 AA_TRNA_LIGASE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNEVRVRYAPSPTGYPHLGNIRTAMFNWLFARHNGGKFIVRIEDTDRERYVEGAVESIL CCCCEEEEECCCCCCCCCCCHHHHHHHHHHHEEECCCEEEEEEECCCHHHHHHHHHHHHH ESLNWLGLDWDEGPDKGGDYGPYYQSERLFLYRQAAERLVTEGKAYYCHCSSERLDKMRE HHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHH EQIARKEPPGYDRCCRDLCLGQKEGAVIRFKIPLEGQTTFIDLIRGEVTFDNAKQDDFVI HHHHHCCCCCHHHHHHHHHCCCCCCCEEEEEECCCCCCCEEEEHHCEEEECCCCCCCEEE LKSDGFPTYHLASVVDDHAMQISHVLRAEEWLPSTPKHLMLYKALGYTPPQYAHLPMILG EECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCEEEC PDRSKLSKRHGATSTIEYKQAGYLPETMVNFLSLLGWAYDDKTELFSRKQLIEYFCLEKV CCHHHHHHHCCCCCEEEHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH SKTAAIFNYEKLDWMNGMYIRTLSAPDLASRAIPFLEKDERIAASGRLNFDYTTKVMPLI HHHHHHHCHHHHHHCCCEEEEEECCCCHHHHCCCCCCCCCCEECCCCCCCCHHHHHHHHH QERVKKLSELAELCWFIYSDNISYDPASLIDKKLTKDESLCALKAAFARLEALANFDAVS HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCC MEEHIRPLAAELELKPGQLFGMLRTASTGQQVAPPLFQTMEVLGRERCLGRIAMAIARLS HHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH ELPS HCCC >Mature Secondary Structure TNEVRVRYAPSPTGYPHLGNIRTAMFNWLFARHNGGKFIVRIEDTDRERYVEGAVESIL CCCEEEEECCCCCCCCCCCHHHHHHHHHHHEEECCCEEEEEEECCCHHHHHHHHHHHHH ESLNWLGLDWDEGPDKGGDYGPYYQSERLFLYRQAAERLVTEGKAYYCHCSSERLDKMRE HHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHH EQIARKEPPGYDRCCRDLCLGQKEGAVIRFKIPLEGQTTFIDLIRGEVTFDNAKQDDFVI HHHHHCCCCCHHHHHHHHHCCCCCCCEEEEEECCCCCCCEEEEHHCEEEECCCCCCCEEE LKSDGFPTYHLASVVDDHAMQISHVLRAEEWLPSTPKHLMLYKALGYTPPQYAHLPMILG EECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCEEEC PDRSKLSKRHGATSTIEYKQAGYLPETMVNFLSLLGWAYDDKTELFSRKQLIEYFCLEKV CCHHHHHHHCCCCCEEEHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH SKTAAIFNYEKLDWMNGMYIRTLSAPDLASRAIPFLEKDERIAASGRLNFDYTTKVMPLI HHHHHHHCHHHHHHCCCEEEEEECCCCHHHHCCCCCCCCCCEECCCCCCCCHHHHHHHHH QERVKKLSELAELCWFIYSDNISYDPASLIDKKLTKDESLCALKAAFARLEALANFDAVS HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCC MEEHIRPLAAELELKPGQLFGMLRTASTGQQVAPPLFQTMEVLGRERCLGRIAMAIARLS HHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH ELPS HCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA