| Definition | Dehalococcoides ethenogenes 195, complete genome. |
|---|---|
| Accession | NC_002936 |
| Length | 1,469,720 |
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The map label for this gene is crcB
Identifier: 57233802
GI number: 57233802
Start: 1354775
End: 1355167
Strand: Direct
Name: crcB
Synonym: DET1498
Alternate gene names: 57233802
Gene position: 1354775-1355167 (Clockwise)
Preceding gene: 57233803
Following gene: 57233800
Centisome position: 92.18
GC content: 48.6
Gene sequence:
>393_bases ATGGGCGAAATACTGCTGCTGGCGGCAGGCGGGGCTTTGGGTGCAGTCAGCCGTTACGGGCTGAATAACCTTACCGTCAA ATTGTTGGGAGATAGCTTTCCTTACGGAACCCTGATTGTAAACTGCCTGGGCTGTTTCGTGCTGGGCTTCCTGATGCAGT GGGGATTCAGCTCCGACAGCCACAATACCCACCTGAAACTTATGCTGACAGCCGGTTTTCTGGGGGCTTTCACCACTTTT TCCACCTTCAGTTATGAAACTTTAGACTGCTTTAAAAATGGCGACTACTTTAACGGTTTTTCCAATATTCTGGCCAATGT TCTGCTGGGTCTGCTGATGGTATTCATAGGAGCGTATCTGGGCAGTCTTTTAAAACAGAACAGCGGAACATAA
Upstream 100 bases:
>100_bases TTCCGGCAGGCAGATAGCCTGCATTTACTGCCGTCATTCCGGGGCAAAAAACGCCTCTTTTCGGCGTATCTGTTCATCAG CATTTAAAAGAGGTGTTTAA
Downstream 100 bases:
>100_bases TAAAACAGCCTCCGAAAGAGGCTGTTTTTGTCTGCCCTGAACTTACGAACTAGAGACTGGTCAGCGAGTATTCAATATTG CGGTCTTTAAGGCTGGATAC
Product: camphor resistance protein CrcB
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 130; Mature: 129
Protein sequence:
>130_residues MGEILLLAAGGALGAVSRYGLNNLTVKLLGDSFPYGTLIVNCLGCFVLGFLMQWGFSSDSHNTHLKLMLTAGFLGAFTTF STFSYETLDCFKNGDYFNGFSNILANVLLGLLMVFIGAYLGSLLKQNSGT
Sequences:
>Translated_130_residues MGEILLLAAGGALGAVSRYGLNNLTVKLLGDSFPYGTLIVNCLGCFVLGFLMQWGFSSDSHNTHLKLMLTAGFLGAFTTF STFSYETLDCFKNGDYFNGFSNILANVLLGLLMVFIGAYLGSLLKQNSGT >Mature_129_residues GEILLLAAGGALGAVSRYGLNNLTVKLLGDSFPYGTLIVNCLGCFVLGFLMQWGFSSDSHNTHLKLMLTAGFLGAFTTFS TFSYETLDCFKNGDYFNGFSNILANVLLGLLMVFIGAYLGSLLKQNSGT
Specific function: Not Known. Overproduction Leads To Camphor Resistance And Chromosome Condensation; Deletion Increases Sensibility To Nucleoid Decondensation. Probably Interacts With The Heat-Shock Protein Cspe, Possibly Providing A Way To Anchor The Chromosome To The Mem
COG id: COG0239
COG function: function code D; Integral membrane protein possibly involved in chromosome condensation
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CrcB family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): CRCB_DEHE1 (Q3Z6F1)
Other databases:
- EMBL: CP000027 - RefSeq: YP_182198.1 - STRING: Q3Z6F1 - GeneID: 3229265 - GenomeReviews: CP000027_GR - KEGG: det:DET1498 - TIGR: DET1498 - eggNOG: COG0239 - HOGENOM: HBG753179 - OMA: LISELCV - ProtClustDB: PRK14212 - BioCyc: DETH243164:DET_1498-MONOMER - HAMAP: MF_00454 - InterPro: IPR003691 - TIGRFAMs: TIGR00494
Pfam domain/function: PF02537 CRCB
EC number: NA
Molecular weight: Translated: 13915; Mature: 13784
Theoretical pI: Translated: 6.48; Mature: 6.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0xe62d81c)-; HASH(0xead9a44)-; HASH(0xda2d538)-; HASH(0xe7d6c14)-;
Cys/Met content:
2.3 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGEILLLAAGGALGAVSRYGLNNLTVKLLGDSFPYGTLIVNCLGCFVLGFLMQWGFSSDS CCCEEEEECCCHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCC HNTHLKLMLTAGFLGAFTTFSTFSYETLDCFKNGDYFNGFSNILANVLLGLLMVFIGAYL CCCEEEEEEHHHHHHHHHHHHHCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH GSLLKQNSGT HHHHHCCCCH >Mature Secondary Structure GEILLLAAGGALGAVSRYGLNNLTVKLLGDSFPYGTLIVNCLGCFVLGFLMQWGFSSDS CCEEEEECCCHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCC HNTHLKLMLTAGFLGAFTTFSTFSYETLDCFKNGDYFNGFSNILANVLLGLLMVFIGAYL CCCEEEEEEHHHHHHHHHHHHHCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH GSLLKQNSGT HHHHHCCCCH
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA