| Definition | Dehalococcoides ethenogenes 195, complete genome. |
|---|---|
| Accession | NC_002936 |
| Length | 1,469,720 |
Click here to switch to the map view.
The map label for this gene is 57233800
Identifier: 57233800
GI number: 57233800
Start: 1356115
End: 1356633
Strand: Direct
Name: 57233800
Synonym: DET1500
Alternate gene names: NA
Gene position: 1356115-1356633 (Clockwise)
Preceding gene: 57233802
Following gene: 57233799
Centisome position: 92.27
GC content: 46.24
Gene sequence:
>519_bases ATGTCACCGCGCAAACTCAAGACTGATCCTGTAATACTGGAAATGCCAGATCAAAAGATGGCGGTTGTCAGGGGAAAGGG TGCTCCGGACAAGGTTTTCTCCCAAATATTCCCGGCTTTGTTTGGCTCTGTATATACCCTGAAATTTGACCTGCTGAAGA AGGGATTAGAGTCATTTAAAGTAAGTTGCCCGCGTGCCCGTTACCCTGATGCCCATTTATATCCAAAGGATGAATGGGTG ATTATTGCCGGTATACCGGTACCTGAAAATATAACTTCACTGCCCCAGAAAGAACCCGGTACCGAGGTAAAGCTGGAAAC TTGGGAATACGGCACGGTAGCCCAAATCCTGCATTTGGGGTCTTACGATCAGGAAATGGAATCTGTGGAACGCCTGCACA GGTTTATCGCCGCAAACGGTTATGAGATATCCGGCCCGCATGAGGAAGAATATCAATCCAAACCGGATGCCAAAGTACTA AAAACCCTTATCCGCTACCAGATAAAGAAACAAAAATAA
Upstream 100 bases:
>100_bases AAGTACCCTCCTTACAATCCAGCCATTTATAAAAGCAGTCTTAAACAAGGCCGCAAGGAGTGTTATACTTACCATAAATA TTCCGGATAAGGAGGTGCTG
Downstream 100 bases:
>100_bases ACCGGGTACAAGACAAGGATACATCATGAAATCTTTGGTTATATATGATTCATTTTATGGCAACACCGAGCAAATTGCCC GGTCTGTAGCCAGTGCTATC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 172; Mature: 171
Protein sequence:
>172_residues MSPRKLKTDPVILEMPDQKMAVVRGKGAPDKVFSQIFPALFGSVYTLKFDLLKKGLESFKVSCPRARYPDAHLYPKDEWV IIAGIPVPENITSLPQKEPGTEVKLETWEYGTVAQILHLGSYDQEMESVERLHRFIAANGYEISGPHEEEYQSKPDAKVL KTLIRYQIKKQK
Sequences:
>Translated_172_residues MSPRKLKTDPVILEMPDQKMAVVRGKGAPDKVFSQIFPALFGSVYTLKFDLLKKGLESFKVSCPRARYPDAHLYPKDEWV IIAGIPVPENITSLPQKEPGTEVKLETWEYGTVAQILHLGSYDQEMESVERLHRFIAANGYEISGPHEEEYQSKPDAKVL KTLIRYQIKKQK >Mature_171_residues SPRKLKTDPVILEMPDQKMAVVRGKGAPDKVFSQIFPALFGSVYTLKFDLLKKGLESFKVSCPRARYPDAHLYPKDEWVI IAGIPVPENITSLPQKEPGTEVKLETWEYGTVAQILHLGSYDQEMESVERLHRFIAANGYEISGPHEEEYQSKPDAKVLK TLIRYQIKKQK
Specific function: Unknown
COG id: COG4832
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19618; Mature: 19487
Theoretical pI: Translated: 8.88; Mature: 8.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPRKLKTDPVILEMPDQKMAVVRGKGAPDKVFSQIFPALFGSVYTLKFDLLKKGLESFK CCCCCCCCCCEEEECCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VSCPRARYPDAHLYPKDEWVIIAGIPVPENITSLPQKEPGTEVKLETWEYGTVAQILHLG CCCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHCCCCCCCCEEEEEECCCHHHHHHHHCC SYDQEMESVERLHRFIAANGYEISGPHEEEYQSKPDAKVLKTLIRYQIKKQK CCHHHHHHHHHHHHHHHCCCEECCCCCHHHHCCCCCHHHHHHHHHHHHHCCC >Mature Secondary Structure SPRKLKTDPVILEMPDQKMAVVRGKGAPDKVFSQIFPALFGSVYTLKFDLLKKGLESFK CCCCCCCCCEEEECCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VSCPRARYPDAHLYPKDEWVIIAGIPVPENITSLPQKEPGTEVKLETWEYGTVAQILHLG CCCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHCCCCCCCCEEEEEECCCHHHHHHHHCC SYDQEMESVERLHRFIAANGYEISGPHEEEYQSKPDAKVLKTLIRYQIKKQK CCHHHHHHHHHHHHHHHCCCEECCCCCHHHHCCCCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA