| Definition | Dehalococcoides ethenogenes 195, complete genome. |
|---|---|
| Accession | NC_002936 |
| Length | 1,469,720 |
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The map label for this gene is 57233743
Identifier: 57233743
GI number: 57233743
Start: 1314455
End: 1315303
Strand: Direct
Name: 57233743
Synonym: DET1455
Alternate gene names: NA
Gene position: 1314455-1315303 (Clockwise)
Preceding gene: 57235101
Following gene: 57233742
Centisome position: 89.44
GC content: 53.0
Gene sequence:
>849_bases ATGATAATAGATTTTCATACCCATATTTTCCCGCCCGAAATCATTGCAGCCCGGCAGGACTACGCCTGCCGGGATAGCTG CCTGGGAATGCTGTATTCAAATCCCAAAGCCAAAATGATTACCGCAGAGGAACTGTTAACGGCAATGGACGAAGCCGGCA TAAGCCAGGCGGTAACCCTTAATATCAGCTGGGATTCAGCCGAGCTGTGCGCACTTACCAATAACTACCTGCTGGATTCT GCCCGCCGCTATCCCAAAAGGCTTATCCCGTTCTGCGCTTTACCTGTTTCAGACCCGGCGGCCAGCCTTAAGGAACTGGA GCGCTGCCTTGAGCTGGGAGTAAAGGGTTTGGGTGAACTCCGCACCGAAGAGCCGGAAAGACTGGCTTCCCCTGCCTATC AACCTCTGTTTGACCGGATATCCGAAAACAGCCTGATCTGCCTTTTTCACGCTTCAGAGCCGCTGGGGCATATCTACTCC GGCAAGGGCAATACCACTCCGGAAAAGTTTTACCCCTTTGTTGCCCGCTACCCTGAGCTTAAGTTGGTACTTGCCCATCT GGGCGGGGGCATGCCCTTTTACCACCTTATGCCCGAAGCTGAAAAAGCGCTGGCCAATACCGCCTATGACACCGCCGCCG CCCCTTTCCTGTACAAACCGGAGATTTACCGTCAGGTGATAACCCTGAGCGGGGAAAATAAACTCCTTTTCGGCAGTGAT TACCCCCTGATGGCTTATGAACGCACCTTGAAACATCTGGCACAAGGCTGTCTTGAGCCGGATATATTGGCAAAGGTAAT GCAGCAAAACGCCCTGAACTGGCTGGGCGAAGGGAAAGACCAATCTTGA
Upstream 100 bases:
>100_bases ACCCCGGTAACAGCCAGCCTGCCTGAAGAACCCGAAGAAAAACCGGCTGCCGCTGCCGAAGAAAAAGAAACCGCTGAAAA GGAATAAAAATCCAACCCTT
Downstream 100 bases:
>100_bases CCGAAGGACTTATCCGCACCTTTATTGCTATAGAACTGCCGCCGGAGCTAAAAACCAGACTCGCCGGTCTCCGGGATGCA TTACCCATACCCTCACAAGC
Product: hypothetical protein
Products: NA
Alternate protein names: 2-Amino-3-Carboxymuconate-6- Semialdehyde Decarboxylase; Metal-Dependent Hydrolase; Amidohydrolase Family Protein; 2-Amino-3-Carboxymuconate-6-Semialdehyde Decarboxylase
Number of amino acids: Translated: 282; Mature: 282
Protein sequence:
>282_residues MIIDFHTHIFPPEIIAARQDYACRDSCLGMLYSNPKAKMITAEELLTAMDEAGISQAVTLNISWDSAELCALTNNYLLDS ARRYPKRLIPFCALPVSDPAASLKELERCLELGVKGLGELRTEEPERLASPAYQPLFDRISENSLICLFHASEPLGHIYS GKGNTTPEKFYPFVARYPELKLVLAHLGGGMPFYHLMPEAEKALANTAYDTAAAPFLYKPEIYRQVITLSGENKLLFGSD YPLMAYERTLKHLAQGCLEPDILAKVMQQNALNWLGEGKDQS
Sequences:
>Translated_282_residues MIIDFHTHIFPPEIIAARQDYACRDSCLGMLYSNPKAKMITAEELLTAMDEAGISQAVTLNISWDSAELCALTNNYLLDS ARRYPKRLIPFCALPVSDPAASLKELERCLELGVKGLGELRTEEPERLASPAYQPLFDRISENSLICLFHASEPLGHIYS GKGNTTPEKFYPFVARYPELKLVLAHLGGGMPFYHLMPEAEKALANTAYDTAAAPFLYKPEIYRQVITLSGENKLLFGSD YPLMAYERTLKHLAQGCLEPDILAKVMQQNALNWLGEGKDQS >Mature_282_residues MIIDFHTHIFPPEIIAARQDYACRDSCLGMLYSNPKAKMITAEELLTAMDEAGISQAVTLNISWDSAELCALTNNYLLDS ARRYPKRLIPFCALPVSDPAASLKELERCLELGVKGLGELRTEEPERLASPAYQPLFDRISENSLICLFHASEPLGHIYS GKGNTTPEKFYPFVARYPELKLVLAHLGGGMPFYHLMPEAEKALANTAYDTAAAPFLYKPEIYRQVITLSGENKLLFGSD YPLMAYERTLKHLAQGCLEPDILAKVMQQNALNWLGEGKDQS
Specific function: Unknown
COG id: COG2159
COG function: function code R; Predicted metal-dependent hydrolase of the TIM-barrel fold
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31463; Mature: 31463
Theoretical pI: Translated: 5.19; Mature: 5.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIIDFHTHIFPPEIIAARQDYACRDSCLGMLYSNPKAKMITAEELLTAMDEAGISQAVTL CEEECCCCCCCHHHHHCCCCCHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHCCCCEEEEE NISWDSAELCALTNNYLLDSARRYPKRLIPFCALPVSDPAASLKELERCLELGVKGLGEL EEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH RTEEPERLASPAYQPLFDRISENSLICLFHASEPLGHIYSGKGNTTPEKFYPFVARYPEL CCCCHHHHHCCCHHHHHHHCCCCCEEEEEECCCCCCCEECCCCCCCHHHHHHHHHCCCHH KLVLAHLGGGMPFYHLMPEAEKALANTAYDTAAAPFLYKPEIYRQVITLSGENKLLFGSD HHHHHHHCCCCCHHHHCCHHHHHHHHHHHHHHCCCCEECHHHHHHHHHCCCCCEEEECCC YPLMAYERTLKHLAQGCLEPDILAKVMQQNALNWLGEGKDQS CCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MIIDFHTHIFPPEIIAARQDYACRDSCLGMLYSNPKAKMITAEELLTAMDEAGISQAVTL CEEECCCCCCCHHHHHCCCCCHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHCCCCEEEEE NISWDSAELCALTNNYLLDSARRYPKRLIPFCALPVSDPAASLKELERCLELGVKGLGEL EEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH RTEEPERLASPAYQPLFDRISENSLICLFHASEPLGHIYSGKGNTTPEKFYPFVARYPEL CCCCHHHHHCCCHHHHHHHCCCCCEEEEEECCCCCCCEECCCCCCCHHHHHHHHHCCCHH KLVLAHLGGGMPFYHLMPEAEKALANTAYDTAAAPFLYKPEIYRQVITLSGENKLLFGSD HHHHHHHCCCCCHHHHCCHHHHHHHHHHHHHHCCCCEECHHHHHHHHHCCCCCEEEECCC YPLMAYERTLKHLAQGCLEPDILAKVMQQNALNWLGEGKDQS CCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA