| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 57165210
Identifier: 57165210
GI number: 57165210
Start: 38893
End: 39300
Strand: Direct
Name: 57165210
Synonym: msr0050
Alternate gene names: NA
Gene position: 38893-39300 (Clockwise)
Preceding gene: 13470365
Following gene: 13470371
Centisome position: 0.55
GC content: 62.99
Gene sequence:
>408_bases ATGAAATCTCGGTTCGCGATTCTTGCGGCGGCTCTTGCCGCAATCTCGTTTGCGAGCGCCAGCGGGGCGATCGCGCAAGA GCGCCCTTGCCACAGTCCCGATCCCGTCAACACCCTAAAGGAGATGTCGGAGGCTATCTATGCCTGCTGGAGGCCGCCAG CGGGAACCGCGGGCATGTCCTTGACGCTGCAGTTCTCGCTGCGCCGCAACGGCACGCTGATCGGCAAGCCTCGCGCCACC TATTCCGATCTGGGAACCGATCCGCAACTCAGCCGGGCCTTCGTGGCATCCATCCTCAAGGCACTCGACGAAGCGTTGCC ATTGCCCTTTTCGGACGGCATGGGCGGAGCAATTGCTGGACGCATGCTTGCGCCTCGCTTCACGGCGGCGCTTGAAGGTG CATCCTGA
Upstream 100 bases:
>100_bases CGCCGCGAACTGTGGGCTGGATAGGATCATTTTCCGAGGCCGGCGCTTGACTGCCGGGTTTGTGCGGCCGAAGAATTGGT GCGCAGGCGGGGGCTCTCGA
Downstream 100 bases:
>100_bases CGCACATCGTCTAATGCAGGTCGGTGATATGCCCTGAAATGGGTGGGTTATGCGGCTGGAACATCTTGCCGCGCTCGGCG ATGAGGATCATCAGCAGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 135; Mature: 135
Protein sequence:
>135_residues MKSRFAILAAALAAISFASASGAIAQERPCHSPDPVNTLKEMSEAIYACWRPPAGTAGMSLTLQFSLRRNGTLIGKPRAT YSDLGTDPQLSRAFVASILKALDEALPLPFSDGMGGAIAGRMLAPRFTAALEGAS
Sequences:
>Translated_135_residues MKSRFAILAAALAAISFASASGAIAQERPCHSPDPVNTLKEMSEAIYACWRPPAGTAGMSLTLQFSLRRNGTLIGKPRAT YSDLGTDPQLSRAFVASILKALDEALPLPFSDGMGGAIAGRMLAPRFTAALEGAS >Mature_135_residues MKSRFAILAAALAAISFASASGAIAQERPCHSPDPVNTLKEMSEAIYACWRPPAGTAGMSLTLQFSLRRNGTLIGKPRAT YSDLGTDPQLSRAFVASILKALDEALPLPFSDGMGGAIAGRMLAPRFTAALEGAS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14068; Mature: 14068
Theoretical pI: Translated: 9.32; Mature: 9.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSRFAILAAALAAISFASASGAIAQERPCHSPDPVNTLKEMSEAIYACWRPPAGTAGMS CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEE LTLQFSLRRNGTLIGKPRATYSDLGTDPQLSRAFVASILKALDEALPLPFSDGMGGAIAG EEEEEEECCCCEEEECCCCCHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHH RMLAPRFTAALEGAS HHHHHHHHHHCCCCC >Mature Secondary Structure MKSRFAILAAALAAISFASASGAIAQERPCHSPDPVNTLKEMSEAIYACWRPPAGTAGMS CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEE LTLQFSLRRNGTLIGKPRATYSDLGTDPQLSRAFVASILKALDEALPLPFSDGMGGAIAG EEEEEEECCCCEEEECCCCCHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHH RMLAPRFTAALEGAS HHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA