| Definition | Bacillus clausii KSM-K16, complete genome. |
|---|---|
| Accession | NC_006582 |
| Length | 4,303,871 |
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The map label for this gene is levD [C]
Identifier: 56965828
GI number: 56965828
Start: 4247581
End: 4247994
Strand: Direct
Name: levD [C]
Synonym: ABC4070
Alternate gene names: 56965828
Gene position: 4247581-4247994 (Clockwise)
Preceding gene: 56965819
Following gene: 56965829
Centisome position: 98.69
GC content: 37.92
Gene sequence:
>414_bases TTGAAACATTATTTATTCGCATCACATGGGCATTTTGCAAAAGAATTGGTGAGCACGATAAAAATGATTATTGGAGGAGA TCACTCGTTAAGGTCGGTTAGTTTGGAACCTCACACAAGTGTCCAACAGTTAGAAGGGGAAATTGATGAATTCTTGCAAC TAGGTGACATGGACCAAGATCAGTACTTTATTTTAACAGATGTACTTGGGGGGAGTGTCACTAACACGTGCAATAAGAAA GTAGGAAAGAAGAATGTGTACATTATAACGGGCATGAATTTGCCTCTTGCATTGGAGTTATTAAATGCCCCTGCTTCCCT CGATGTTAGGGAGTCAATTAATAACTGTATTGAGCAAGGCAAGAATGGAATTATATTTGTGAATCAAATGATAGAAGAAC ATGCTAACTCATAG
Upstream 100 bases:
>100_bases CACCCAATTCCACAAGCTCTATGCAAATGAGATTTCATTTATTTATTTACACACTAGTTGGCACAACAATTGCAGTAGAA AATACGAAGGAGGTTATAGA
Downstream 100 bases:
>100_bases TCGAAGGGAGCAATGAATGATGGTTACATTTTTTAGAGTTGATGATCGATTGATTCATGGACAAGTAGCGTATTCTTGGA CAAAACATTTAGAAGCAGAA
Product: PTS system, mannose-specific enzyme II, A component
Products: Protein Histidine; Sugar Phosphate.; D-glucosamine-6-phosphate [Cytoplasm]; pyruvate; glucose-6-phosphate [Cytoplasm]; N-acetyl-D-glucosamine-6-phosphate [Cytoplasm]; mannose-6-phosphate [Cytoplasm]; fructose-6-phosphate [Cytoplasm] [C]
Alternate protein names: PTS System Transporter Subunit IIA
Number of amino acids: Translated: 137; Mature: 137
Protein sequence:
>137_residues MKHYLFASHGHFAKELVSTIKMIIGGDHSLRSVSLEPHTSVQQLEGEIDEFLQLGDMDQDQYFILTDVLGGSVTNTCNKK VGKKNVYIITGMNLPLALELLNAPASLDVRESINNCIEQGKNGIIFVNQMIEEHANS
Sequences:
>Translated_137_residues MKHYLFASHGHFAKELVSTIKMIIGGDHSLRSVSLEPHTSVQQLEGEIDEFLQLGDMDQDQYFILTDVLGGSVTNTCNKK VGKKNVYIITGMNLPLALELLNAPASLDVRESINNCIEQGKNGIIFVNQMIEEHANS >Mature_137_residues MKHYLFASHGHFAKELVSTIKMIIGGDHSLRSVSLEPHTSVQQLEGEIDEFLQLGDMDQDQYFILTDVLGGSVTNTCNKK VGKKNVYIITGMNLPLALELLNAPASLDVRESINNCIEQGKNGIIFVNQMIEEHANS
Specific function: This Is A Component Of The Phosphoenolpyruvate-Dependent Sugar Phosphotransferase System (Pts), A Major Carbohydrate Active -Transport System. The IIcd Domains Contain The Sugar Binding Site And The Transmembrane Channel; The IIa Domain Contains The Prim
COG id: COG2893
COG function: function code G; Phosphotransferase system, mannose/fructose-specific component IIA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 220 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 2880 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 260 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 2.7.1.69 [C]
Molecular weight: Translated: 15172; Mature: 15172
Theoretical pI: Translated: 5.14; Mature: 5.14
Prosite motif: PS51096 PTS_EIIA_TYPE_4
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKHYLFASHGHFAKELVSTIKMIIGGDHSLRSVSLEPHTSVQQLEGEIDEFLQLGDMDQD CCCEEECCCCHHHHHHHHHHHHHHCCCCCCEEECCCCCCHHHHHHHHHHHHHHHCCCCCC QYFILTDVLGGSVTNTCNKKVGKKNVYIITGMNLPLALELLNAPASLDVRESINNCIEQG CEEEEEECCCCCHHHHHHHCCCCCCEEEEECCCCCHHHHHHCCCCCCCHHHHHHHHHHHC KNGIIFVNQMIEEHANS CCCEEEHHHHHHHHCCC >Mature Secondary Structure MKHYLFASHGHFAKELVSTIKMIIGGDHSLRSVSLEPHTSVQQLEGEIDEFLQLGDMDQD CCCEEECCCCHHHHHHHHHHHHHHCCCCCCEEECCCCCCHHHHHHHHHHHHHHHCCCCCC QYFILTDVLGGSVTNTCNKKVGKKNVYIITGMNLPLALELLNAPASLDVRESINNCIEQG CEEEEEECCCCCHHHHHHHCCCCCCEEEEECCCCCHHHHHHCCCCCCCHHHHHHHHHHHC KNGIIFVNQMIEEHANS CCCEEEHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Protein N-Phosphohistidine; Sugar; phosphoenolpyruvate; glucosamine [Periplasm]; phosphoenolpyruvate; beta-D-glucose [Periplasm]; N-acetyl-D-glucosamine [Periplasm]; mannose [Periplasm]; fructose [Periplasm] [C]
Specific reaction: Protein N-Phosphohistidine + Sugar = Protein Histidine + Sugar Phosphate. phosphoenolpyruvate + glucosamine [Periplasm] = D-glucosamine-6-phosphate [Cytoplasm] + pyruvate phosphoenolpyruvate + beta-D-glucose [Periplasm] = glucose-6-phosphate [Cytoplasm]
General reaction: Transferring phosphorus-containing groups; Phosphotransferases with an alcohol group as acceptor [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA