| Definition | Bacillus clausii KSM-K16, complete genome. |
|---|---|
| Accession | NC_006582 |
| Length | 4,303,871 |
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The map label for this gene is 56965567
Identifier: 56965567
GI number: 56965567
Start: 3969401
End: 3970915
Strand: Direct
Name: 56965567
Synonym: ABC3809
Alternate gene names: NA
Gene position: 3969401-3970915 (Clockwise)
Preceding gene: 56965565
Following gene: 56965568
Centisome position: 92.23
GC content: 48.58
Gene sequence:
>1515_bases ATGAAAGTTGGACAGGCAAACGACATAGCGGTGTTCGTTCAATTTAATCAATTGGTAGCCGAAGCAAGCGATGAGCAGAG CATTCTTCGTTTATTGCTTGATACCGTTGATGCCTTTATCCCTCATGTGGATATGGCGATCGTCTATTTATACGACGAGA ACCAAAAGGTGCTTCGGCTTGGCGCAGGCACAGGCGTCTCTGTACAAAGTTTGCGGCAGCTCGCTTTTAAACCCGGTGAA TCGTTGACGGGCAAAGTGTTTCTCAGCAAAAAACCGTACCTTTGCCTCGGCAAGCATGATGTTAAGCGAAAAATGGCCAA CATCTCACCAGAAAACTGGAAATGGTTTCGCGAAGGCACATACAAACTCGATGTTACGAGCTCCATTAATGTGCCGTTCC TGTCCAATGGCCGTTGTCTAGGCACATTTACATTAAATCGCTATTCAAGCAGCATCCCATTTCATAAAAAAGACGTTGCC ATTGCTCTCGGACTCGCCCACCAGGCAGCACTGGCGATTGAGAACGTCCGCTTGCATCAGGCACTTGCCTATAGCGATGC AAAAGAAACACTTGCACAATCGTTGCATGACGGGGGGCTGGAGCATGTCCTTACCCGGTTGGAACAGCTTGTGCACACAC CTTGCACGATTGAAGCGAGTGTGAAGGAAGACGAAGCGATTCCGATCATACGCAAGCGAAAACGCCTCGGTTACCTTCGC CCCCGGCAGCCATTGGCGACTTTATCAGTGGTCGACCGGAACATCCTTGAGTTTGCTGCGTTAATGCTTGCTAGCGAGCT AGAAAAACAATATGACGATTATGAACAAGGGCTTCACAGGCGCAATTGCGCGTTCCAAGACCTATTGAATGGAGACTATC GTTCTGTAGAATCCTTGTCCCGCGCCCCTATTTATTGTTTCGTACTTGCAGGCGGTGTTAGCGACAACATTGCGCTTACT CGCCAAATTGAAACAACAGTCCAAGCTTACTTCCCAAATGGGCATTTTTCTGTTTACGAAGGGCGTTATGTCGTCCTTGC TTCTTCTTGTGCCTATATCGATCAGCTTGCGACTTATTTGCAGCGCCACTATCATCTAGTTGTCGGCCTAAGCCGCCCAA GGATGATTGCCGACGTCGCTTCGTCTTACCGGGAAGCGGTGCTTGCTGCTGAAATGAAAAGCGACGCCCCTCTTGTTCGT TATCAAACCCTTGGCTGCCGCAGGCTTTGGCCTTCTTTAGACGAACAGACGAAGCGCGATTTTGTAATTGACTATTTACA GCCACTCCTCGACCTAGAACCTGATTACATTGCCACTCTTGCGGCATTAATCGAAAACGGGCGAGGTGCCCGGCAACAAA CGGCTAAACAATTGCACATCCACGTCAACACGCTCTATCAACGAGTGAAACGGATCGAGCAAGTACTAGACATATCCTTT CAAAATGAAAGACAGTGGCTACAACTCATGATTGCTTATGAGTTGTATGTGGACGGCCACACAGAAACGCCCTAA
Upstream 100 bases:
>100_bases TACTGTTACGATAGGAAGATACACGACGACTCTACTAAAAGGAGAGTGAATCAAGTAAAATTAGAATCATCTATTTTTTC TATGAATGGAGGTCGTGAAA
Downstream 100 bases:
>100_bases AACATGTAGCCCACCATATCCCGTTTGTTTCGTCAGAATATTATAATCATAGACAAGCAAACACAAGTTGAGGTGATCGA CATATGGTGCAAACATATTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 504; Mature: 504
Protein sequence:
>504_residues MKVGQANDIAVFVQFNQLVAEASDEQSILRLLLDTVDAFIPHVDMAIVYLYDENQKVLRLGAGTGVSVQSLRQLAFKPGE SLTGKVFLSKKPYLCLGKHDVKRKMANISPENWKWFREGTYKLDVTSSINVPFLSNGRCLGTFTLNRYSSSIPFHKKDVA IALGLAHQAALAIENVRLHQALAYSDAKETLAQSLHDGGLEHVLTRLEQLVHTPCTIEASVKEDEAIPIIRKRKRLGYLR PRQPLATLSVVDRNILEFAALMLASELEKQYDDYEQGLHRRNCAFQDLLNGDYRSVESLSRAPIYCFVLAGGVSDNIALT RQIETTVQAYFPNGHFSVYEGRYVVLASSCAYIDQLATYLQRHYHLVVGLSRPRMIADVASSYREAVLAAEMKSDAPLVR YQTLGCRRLWPSLDEQTKRDFVIDYLQPLLDLEPDYIATLAALIENGRGARQQTAKQLHIHVNTLYQRVKRIEQVLDISF QNERQWLQLMIAYELYVDGHTETP
Sequences:
>Translated_504_residues MKVGQANDIAVFVQFNQLVAEASDEQSILRLLLDTVDAFIPHVDMAIVYLYDENQKVLRLGAGTGVSVQSLRQLAFKPGE SLTGKVFLSKKPYLCLGKHDVKRKMANISPENWKWFREGTYKLDVTSSINVPFLSNGRCLGTFTLNRYSSSIPFHKKDVA IALGLAHQAALAIENVRLHQALAYSDAKETLAQSLHDGGLEHVLTRLEQLVHTPCTIEASVKEDEAIPIIRKRKRLGYLR PRQPLATLSVVDRNILEFAALMLASELEKQYDDYEQGLHRRNCAFQDLLNGDYRSVESLSRAPIYCFVLAGGVSDNIALT RQIETTVQAYFPNGHFSVYEGRYVVLASSCAYIDQLATYLQRHYHLVVGLSRPRMIADVASSYREAVLAAEMKSDAPLVR YQTLGCRRLWPSLDEQTKRDFVIDYLQPLLDLEPDYIATLAALIENGRGARQQTAKQLHIHVNTLYQRVKRIEQVLDISF QNERQWLQLMIAYELYVDGHTETP >Mature_504_residues MKVGQANDIAVFVQFNQLVAEASDEQSILRLLLDTVDAFIPHVDMAIVYLYDENQKVLRLGAGTGVSVQSLRQLAFKPGE SLTGKVFLSKKPYLCLGKHDVKRKMANISPENWKWFREGTYKLDVTSSINVPFLSNGRCLGTFTLNRYSSSIPFHKKDVA IALGLAHQAALAIENVRLHQALAYSDAKETLAQSLHDGGLEHVLTRLEQLVHTPCTIEASVKEDEAIPIIRKRKRLGYLR PRQPLATLSVVDRNILEFAALMLASELEKQYDDYEQGLHRRNCAFQDLLNGDYRSVESLSRAPIYCFVLAGGVSDNIALT RQIETTVQAYFPNGHFSVYEGRYVVLASSCAYIDQLATYLQRHYHLVVGLSRPRMIADVASSYREAVLAAEMKSDAPLVR YQTLGCRRLWPSLDEQTKRDFVIDYLQPLLDLEPDYIATLAALIENGRGARQQTAKQLHIHVNTLYQRVKRIEQVLDISF QNERQWLQLMIAYELYVDGHTETP
Specific function: Unknown
COG id: COG2508
COG function: function code TQ; Regulator of polyketide synthase expression
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 57075; Mature: 57075
Theoretical pI: Translated: 7.42; Mature: 7.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVGQANDIAVFVQFNQLVAEASDEQSILRLLLDTVDAFIPHVDMAIVYLYDENQKVLRL CCCCCCCCEEEEEEEHHHHHCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCEEEEE GAGTGVSVQSLRQLAFKPGESLTGKVFLSKKPYLCLGKHDVKRKMANISPENWKWFREGT ECCCCCCHHHHHHHHCCCCCCCEEEEEECCCCCEEECCHHHHHHHHCCCCCCCCCEECCE YKLDVTSSINVPFLSNGRCLGTFTLNRYSSSIPFHKKDVAIALGLAHQAALAIENVRLHQ EEEEECCCCCCCEECCCEEEEEEEECCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHH ALAYSDAKETLAQSLHDGGLEHVLTRLEQLVHTPCTIEASVKEDEAIPIIRKRKRLGYLR HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHCCCCC PRQPLATLSVVDRNILEFAALMLASELEKQYDDYEQGLHRRNCAFQDLLNGDYRSVESLS CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCHHHHHHHH RAPIYCFVLAGGVSDNIALTRQIETTVQAYFPNGHFSVYEGRYVVLASSCAYIDQLATYL CCCEEEEEEECCCCCCEEEEEEHHHHHHEECCCCCEEEECCEEEEEECCHHHHHHHHHHH QRHYHLVVGLSRPRMIADVASSYREAVLAAEMKSDAPLVRYQTLGCRRLWPSLDEQTKRD HHHEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHCCHHHHCCCCCHHHHHH FVIDYLQPLLDLEPDYIATLAALIENGRGARQQTAKQLHIHVNTLYQRVKRIEQVLDISF HHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC QNERQWLQLMIAYELYVDGHTETP CCHHHHHHHHHHHHEEECCCCCCC >Mature Secondary Structure MKVGQANDIAVFVQFNQLVAEASDEQSILRLLLDTVDAFIPHVDMAIVYLYDENQKVLRL CCCCCCCCEEEEEEEHHHHHCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCEEEEE GAGTGVSVQSLRQLAFKPGESLTGKVFLSKKPYLCLGKHDVKRKMANISPENWKWFREGT ECCCCCCHHHHHHHHCCCCCCCEEEEEECCCCCEEECCHHHHHHHHCCCCCCCCCEECCE YKLDVTSSINVPFLSNGRCLGTFTLNRYSSSIPFHKKDVAIALGLAHQAALAIENVRLHQ EEEEECCCCCCCEECCCEEEEEEEECCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHH ALAYSDAKETLAQSLHDGGLEHVLTRLEQLVHTPCTIEASVKEDEAIPIIRKRKRLGYLR HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHCCCCC PRQPLATLSVVDRNILEFAALMLASELEKQYDDYEQGLHRRNCAFQDLLNGDYRSVESLS CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCHHHHHHHH RAPIYCFVLAGGVSDNIALTRQIETTVQAYFPNGHFSVYEGRYVVLASSCAYIDQLATYL CCCEEEEEEECCCCCCEEEEEEHHHHHHEECCCCCEEEECCEEEEEECCHHHHHHHHHHH QRHYHLVVGLSRPRMIADVASSYREAVLAAEMKSDAPLVRYQTLGCRRLWPSLDEQTKRD HHHEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHCCHHHHCCCCCHHHHHH FVIDYLQPLLDLEPDYIATLAALIENGRGARQQTAKQLHIHVNTLYQRVKRIEQVLDISF HHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC QNERQWLQLMIAYELYVDGHTETP CCHHHHHHHHHHHHEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA