Click here to switch to the map view.

The map label for this gene is 56965565

Identifier: 56965565

GI number: 56965565

Start: 3967390

End: 3967719

Strand: Direct

Name: 56965565

Synonym: ABC3807

Alternate gene names: NA

Gene position: 3967390-3967719 (Clockwise)

Preceding gene: 56965544

Following gene: 56965567

Centisome position: 92.18

GC content: 45.45

Gene sequence:

>330_bases
ATGGATGAAGCAGAACATCTGAGGCATACGGAGCGGAACCGAGACATCTACGCCAAGCGGAAAGAAACGATTGAGCGTGT
CTTTGCCGATCTGAAACAGAAGCATGGTCTGCGTTGGACCAACCTCAAAGGGTTGGAAAAAAATGCAATGCAGGCGATGC
TTGTTTTTGGTGCGATGAACTTGAAAAAATTAGCCACCTGGAGTTGGAGGAGGAATCTTCCTCCAACTCCAAAGTCTCCA
ATATCCACCCATCTCTTTATCATCAACAAAACGCCTTTGAGAATCATTTTCTCAAAGGCGTTTTGTCTACGATCTGACAC
TAACGCTTAG

Upstream 100 bases:

>100_bases
TTTGTTTCCTCGATGGATGCATAACAGGCAAACTCTTTTCCGCGGTCTACTGTAGCGGTTTGAATGGCGTTTTTAGGTAA
AGAAGTTTTTTAACTATCGG

Downstream 100 bases:

>100_bases
GCATTAGTGTTTTTTAGAAAGAAATTTCTCCGTTATGTCGCCGTGCCTGGCTTACCTTGTGTTTCTATTGGGGTAGGCGT
TTCTGCTTTGACTCCATCCA

Product: putative transposase

Products: NA

Alternate protein names: Transposase IS4 Family Protein

Number of amino acids: Translated: 109; Mature: 109

Protein sequence:

>109_residues
MDEAEHLRHTERNRDIYAKRKETIERVFADLKQKHGLRWTNLKGLEKNAMQAMLVFGAMNLKKLATWSWRRNLPPTPKSP
ISTHLFIINKTPLRIIFSKAFCLRSDTNA

Sequences:

>Translated_109_residues
MDEAEHLRHTERNRDIYAKRKETIERVFADLKQKHGLRWTNLKGLEKNAMQAMLVFGAMNLKKLATWSWRRNLPPTPKSP
ISTHLFIINKTPLRIIFSKAFCLRSDTNA
>Mature_109_residues
MDEAEHLRHTERNRDIYAKRKETIERVFADLKQKHGLRWTNLKGLEKNAMQAMLVFGAMNLKKLATWSWRRNLPPTPKSP
ISTHLFIINKTPLRIIFSKAFCLRSDTNA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12803; Mature: 12803

Theoretical pI: Translated: 11.16; Mature: 11.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDEAEHLRHTERNRDIYAKRKETIERVFADLKQKHGLRWTNLKGLEKNAMQAMLVFGAMN
CCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCC
LKKLATWSWRRNLPPTPKSPISTHLFIINKTPLRIIFSKAFCLRSDTNA
HHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MDEAEHLRHTERNRDIYAKRKETIERVFADLKQKHGLRWTNLKGLEKNAMQAMLVFGAMN
CCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCC
LKKLATWSWRRNLPPTPKSPISTHLFIINKTPLRIIFSKAFCLRSDTNA
HHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA