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The map label for this gene is ydbS [H]

Identifier: 56965435

GI number: 56965435

Start: 3829821

End: 3830312

Strand: Direct

Name: ydbS [H]

Synonym: ABC3673

Alternate gene names: 56965435

Gene position: 3829821-3830312 (Clockwise)

Preceding gene: 56965434

Following gene: 56965436

Centisome position: 88.99

GC content: 44.11

Gene sequence:

>492_bases
TTGAGTATCCCCATAAACGCACCTCAGAAACGTTTATCGAAGGATGCAATCAAGGTTTGGCTTATCAGTGACGCGATTGG
AAATATGATCGTTCTCATCATCTTAGGAATCCTTTTTTACCTTGATGATCGTTTTTTATGGAAAGAATGGGTTGGATGGC
TCTTAATCGGGGCGACCGTGTTAACGATTATCGGCTGGATTTGGTCAGTGATTCGCCCCTTCTTGCTTTACAAACATTGG
CGCTATGATGTCGATGAAGCATATTTGCAACTAAAATCAGGTGCATTAAAAGAAACCCATGAGCTTGTCCCGATGACAAA
AATCCAATCGGTCGCAACCGAGCAAGGCCCGCTTCTTAGAAAATACGGCCTCTGTTCCGTTTCCGTGGAAACGATGGGAT
CGTCTCACACCATACCTGCATTGCCAAAAGAAGCGGCAGTTGAGTTGCGGAATCAAATTGCCCAATATGCAAGAATTAAG
GAAGTGGAGTAA

Upstream 100 bases:

>100_bases
CAAGGGGTTTTAATTTATAGAAAATAGCGACTCATATTGAGATGGATGAACCGGCACTTAAAGCGATGTATAATAGGCAT
AGAATATAGGTGGTGATTGT

Downstream 100 bases:

>100_bases
TGACAAAAGCCAAGCGTTATTCTCCATATACGATGCTTTTTCACTTGATCAACCTTGTACGAAATGCTTTTTTCTTTGTC
ATTTATTTATACGTCGTCAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 163; Mature: 162

Protein sequence:

>163_residues
MSIPINAPQKRLSKDAIKVWLISDAIGNMIVLIILGILFYLDDRFLWKEWVGWLLIGATVLTIIGWIWSVIRPFLLYKHW
RYDVDEAYLQLKSGALKETHELVPMTKIQSVATEQGPLLRKYGLCSVSVETMGSSHTIPALPKEAAVELRNQIAQYARIK
EVE

Sequences:

>Translated_163_residues
MSIPINAPQKRLSKDAIKVWLISDAIGNMIVLIILGILFYLDDRFLWKEWVGWLLIGATVLTIIGWIWSVIRPFLLYKHW
RYDVDEAYLQLKSGALKETHELVPMTKIQSVATEQGPLLRKYGLCSVSVETMGSSHTIPALPKEAAVELRNQIAQYARIK
EVE
>Mature_162_residues
SIPINAPQKRLSKDAIKVWLISDAIGNMIVLIILGILFYLDDRFLWKEWVGWLLIGATVLTIIGWIWSVIRPFLLYKHWR
YDVDEAYLQLKSGALKETHELVPMTKIQSVATEQGPLLRKYGLCSVSVETMGSSHTIPALPKEAAVELRNQIAQYARIKE
VE

Specific function: Unknown

COG id: COG3402

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0699 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005182 [H]

Pfam domain/function: PF03703 DUF304 [H]

EC number: NA

Molecular weight: Translated: 18605; Mature: 18474

Theoretical pI: Translated: 8.97; Mature: 8.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIPINAPQKRLSKDAIKVWLISDAIGNMIVLIILGILFYLDDRFLWKEWVGWLLIGATV
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
LTIIGWIWSVIRPFLLYKHWRYDVDEAYLQLKSGALKETHELVPMTKIQSVATEQGPLLR
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHCCCCHHH
KYGLCSVSVETMGSSHTIPALPKEAAVELRNQIAQYARIKEVE
HHCCCEEHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SIPINAPQKRLSKDAIKVWLISDAIGNMIVLIILGILFYLDDRFLWKEWVGWLLIGATV
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
LTIIGWIWSVIRPFLLYKHWRYDVDEAYLQLKSGALKETHELVPMTKIQSVATEQGPLLR
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHCCCCHHH
KYGLCSVSVETMGSSHTIPALPKEAAVELRNQIAQYARIKEVE
HHCCCEEHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]