Click here to switch to the map view.

The map label for this gene is 56965434

Identifier: 56965434

GI number: 56965434

Start: 3828584

End: 3829399

Strand: Direct

Name: 56965434

Synonym: ABC3672

Alternate gene names: NA

Gene position: 3828584-3829399 (Clockwise)

Preceding gene: 56965432

Following gene: 56965435

Centisome position: 88.96

GC content: 33.58

Gene sequence:

>816_bases
ATGAAAAAGTTAGCCAGTACCATTTTAAAAACCATTATATTTTTTATGAGTTGGGCCATTCTAATATCATTTACGCCTGA
TATACATACAAACAGTCAGGCGTATTTACGGTTATGGTGGGAGTTTACACCCCTTGTGGTAGTGGTTTTGTTGTCAGTTG
TCTTCGTTTTTATTGTAGAAAAGGGTAAAATTACAATTCCTGTAGCTCCAAGATTCTTAAAAAGTTCTTTAATAGGTATT
GTTTTAGGTGTCTTGTGGTTAGGGAGCGTAGTAACTGTCTTCTTACTTACAAAAACTATGAATATACAGGGTCAAAACAG
TGTTGATTACATATGGATTTGGATTTTGGCATCACTGTTGAATGTTGCGATGCAGGAATTGTTGGTAAGAGGGTATTTAT
ATCAATTATGGAAACATAAATATAATGTTATTGTGGCAACCATTTTAACAACAATTTTATTTACCGTGATGCATGGGGGT
GCATTTGAAGCAGGTATGATCCCAGTGATTAATGTTATTTCGATGAGCATATTTGTAACGTTACTTTTAGAGTATACAGG
AACAATAGTGGCACCAATAATTATCCATTTCATTTGGAATACAATTGGGGCAATTATATTGGGTGGCGTTTCTTTGGCAG
GTGATTATCCAAATCTTCTAATCAATACTTTTCAAGGAAGTTTGTTGATTTCAGGTGGTACATATAAATTTGAAGGCAGT
ATTATTGTTTCCATAGCTAATTTAATTCTCATTACAAGCCTGCTCGTGTTAAATAAAAGAAAAAGAAATGATAATTTAAG
CGGTCTACTGAAGTAG

Upstream 100 bases:

>100_bases
GAGAAATATTGTTTTTGTGTTAAGCTATTAAAAGTATGATATTCAGCAAACGGACCAGATTACTGCACAGTTTGTCTTAG
GTAGAAAAGAGGAATTAATA

Downstream 100 bases:

>100_bases
GGCGCATTGTTGAAAAAGTATATATTGATTTCAATTGCACTCAGAAGTGAAACATTCTGAGTGTTTTTTTGTGGAAAATG
ATATTTTACCAGATTACTGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 271; Mature: 271

Protein sequence:

>271_residues
MKKLASTILKTIIFFMSWAILISFTPDIHTNSQAYLRLWWEFTPLVVVVLLSVVFVFIVEKGKITIPVAPRFLKSSLIGI
VLGVLWLGSVVTVFLLTKTMNIQGQNSVDYIWIWILASLLNVAMQELLVRGYLYQLWKHKYNVIVATILTTILFTVMHGG
AFEAGMIPVINVISMSIFVTLLLEYTGTIVAPIIIHFIWNTIGAIILGGVSLAGDYPNLLINTFQGSLLISGGTYKFEGS
IIVSIANLILITSLLVLNKRKRNDNLSGLLK

Sequences:

>Translated_271_residues
MKKLASTILKTIIFFMSWAILISFTPDIHTNSQAYLRLWWEFTPLVVVVLLSVVFVFIVEKGKITIPVAPRFLKSSLIGI
VLGVLWLGSVVTVFLLTKTMNIQGQNSVDYIWIWILASLLNVAMQELLVRGYLYQLWKHKYNVIVATILTTILFTVMHGG
AFEAGMIPVINVISMSIFVTLLLEYTGTIVAPIIIHFIWNTIGAIILGGVSLAGDYPNLLINTFQGSLLISGGTYKFEGS
IIVSIANLILITSLLVLNKRKRNDNLSGLLK
>Mature_271_residues
MKKLASTILKTIIFFMSWAILISFTPDIHTNSQAYLRLWWEFTPLVVVVLLSVVFVFIVEKGKITIPVAPRFLKSSLIGI
VLGVLWLGSVVTVFLLTKTMNIQGQNSVDYIWIWILASLLNVAMQELLVRGYLYQLWKHKYNVIVATILTTILFTVMHGG
AFEAGMIPVINVISMSIFVTLLLEYTGTIVAPIIIHFIWNTIGAIILGGVSLAGDYPNLLINTFQGSLLISGGTYKFEGS
IIVSIANLILITSLLVLNKRKRNDNLSGLLK

Specific function: Unknown

COG id: COG1266

COG function: function code R; Predicted metal-dependent membrane protease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30143; Mature: 30143

Theoretical pI: Translated: 10.19; Mature: 10.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLASTILKTIIFFMSWAILISFTPDIHTNSQAYLRLWWEFTPLVVVVLLSVVFVFIVE
CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
KGKITIPVAPRFLKSSLIGIVLGVLWLGSVVTVFLLTKTMNIQGQNSVDYIWIWILASLL
CCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
NVAMQELLVRGYLYQLWKHKYNVIVATILTTILFTVMHGGAFEAGMIPVINVISMSIFVT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
LLLEYTGTIVAPIIIHFIWNTIGAIILGGVSLAGDYPNLLINTFQGSLLISGGTYKFEGS
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCHHHHHHHCCCCEEEECCEEEECCH
IIVSIANLILITSLLVLNKRKRNDNLSGLLK
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MKKLASTILKTIIFFMSWAILISFTPDIHTNSQAYLRLWWEFTPLVVVVLLSVVFVFIVE
CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
KGKITIPVAPRFLKSSLIGIVLGVLWLGSVVTVFLLTKTMNIQGQNSVDYIWIWILASLL
CCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
NVAMQELLVRGYLYQLWKHKYNVIVATILTTILFTVMHGGAFEAGMIPVINVISMSIFVT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
LLLEYTGTIVAPIIIHFIWNTIGAIILGGVSLAGDYPNLLINTFQGSLLISGGTYKFEGS
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCHHHHHHHCCCCEEEECCEEEECCH
IIVSIANLILITSLLVLNKRKRNDNLSGLLK
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA