| Definition | Bacillus clausii KSM-K16, complete genome. |
|---|---|
| Accession | NC_006582 |
| Length | 4,303,871 |
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The map label for this gene is gsiB [H]
Identifier: 56965269
GI number: 56965269
Start: 3644228
End: 3644629
Strand: Direct
Name: gsiB [H]
Synonym: ABC3507
Alternate gene names: 56965269
Gene position: 3644228-3644629 (Clockwise)
Preceding gene: 56965267
Following gene: 56965273
Centisome position: 84.67
GC content: 42.54
Gene sequence:
>402_bases ATGGCACAAAACAATAACCGCAACAATAATGGAAACAACGGAAAAATGAGCTATGAGGAAGCAGGAAGAAAAGGCGGAGA AACTACAAGCCGCAACCATGACAAAGAATTCTATCAAGAAATTGGCGAAAAAGGCGGAGAAGCTACTAGCCGCAACCACG ACAAAGAATTCTATCAAGAAATTGGCGAAAAAGGCGGAGAAGCCACTAGCCGCAACCACGATAAAGAATTCTACCAAGAA ATTGGCGAAAAAGGCGGAGAAGCTACTAGCAACAACCACGATAAAGAATTCTACCAAGAAATTGGCAAAAAAGGTGGACA AACGACTAGCCAAAACCATGACAAAGAATTCTACCAAGAGATTGGTCAAAAAGGCGGACAACGGAACAGCAGCAACTCAT AA
Upstream 100 bases:
>100_bases ATATTTACCTAGGATGATTAGAGCAAAATGAAATCAAGGGGGTTTTAATTGATTTCTTTGAGGTATACAAATACCACACT ACTTAAAGGAGGAATTAAAA
Downstream 100 bases:
>100_bases GCGAATGGAAAAGAGAGGTGGCCGCCTCTCTTTTCGTGCTTTTACCCTGTTCCGTGCCCGTTTATTGATCTTATTGTAGC AAATCCCCGTGGTCAGCGTC
Product: general stress protein B
Products: NA
Alternate protein names: General stress protein B [H]
Number of amino acids: Translated: 133; Mature: 132
Protein sequence:
>133_residues MAQNNNRNNNGNNGKMSYEEAGRKGGETTSRNHDKEFYQEIGEKGGEATSRNHDKEFYQEIGEKGGEATSRNHDKEFYQE IGEKGGEATSNNHDKEFYQEIGKKGGQTTSQNHDKEFYQEIGQKGGQRNSSNS
Sequences:
>Translated_133_residues MAQNNNRNNNGNNGKMSYEEAGRKGGETTSRNHDKEFYQEIGEKGGEATSRNHDKEFYQEIGEKGGEATSRNHDKEFYQE IGEKGGEATSNNHDKEFYQEIGKKGGQTTSQNHDKEFYQEIGQKGGQRNSSNS >Mature_132_residues AQNNNRNNNGNNGKMSYEEAGRKGGETTSRNHDKEFYQEIGEKGGEATSRNHDKEFYQEIGEKGGEATSRNHDKEFYQEI GEKGGEATSNNHDKEFYQEIGKKGGQTTSQNHDKEFYQEIGQKGGQRNSSNS
Specific function: Involved in an adaptative response to nutrient deprivation other than sporulation [H]
COG id: COG3729
COG function: function code R; General stress protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019626 - InterPro: IPR000389 [H]
Pfam domain/function: PF10685 KGG; PF00477 LEA_5 [H]
EC number: NA
Molecular weight: Translated: 14974; Mature: 14843
Theoretical pI: Translated: 5.65; Mature: 5.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQNNNRNNNGNNGKMSYEEAGRKGGETTSRNHDKEFYQEIGEKGGEATSRNHDKEFYQE CCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHH IGEKGGEATSRNHDKEFYQEIGEKGGEATSNNHDKEFYQEIGKKGGQTTSQNHDKEFYQE HHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHH IGQKGGQRNSSNS HHHHCCCCCCCCC >Mature Secondary Structure AQNNNRNNNGNNGKMSYEEAGRKGGETTSRNHDKEFYQEIGEKGGEATSRNHDKEFYQE CCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHH IGEKGGEATSRNHDKEFYQEIGEKGGEATSNNHDKEFYQEIGKKGGQTTSQNHDKEFYQE HHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHH IGQKGGQRNSSNS HHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1378051; 9384377; 8012595 [H]