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The map label for this gene is opuAC [H]

Identifier: 56965179

GI number: 56965179

Start: 3543445

End: 3544302

Strand: Direct

Name: opuAC [H]

Synonym: ABC3417

Alternate gene names: 56965179

Gene position: 3543445-3544302 (Clockwise)

Preceding gene: 56965178

Following gene: 56965191

Centisome position: 82.33

GC content: 44.06

Gene sequence:

>858_bases
GTGAACAAAATAACAAGCATAACGGGAATTCTTTTGGCCGCTTTGACACTTGGCGGCTGTGCCAGCAATGAACAAACGAT
TACAATTGGCCACAACAATTACGCCGAGTCAATTGCTTTTGCCCATTTATGGAAAACGCTTTTAGAGGACCAAGGTTATC
AAGTGGAACTTTCTCTTGTGGAGAAAGCAATGCTTTTTAATGGAGTCGAAAACGGCGATATCGATATCGGCTTTAATACT
TGGCTCCCTTTCACTGACCAAGCATATGTCTCAATCGATTCAGAAGAAATAGACGTACAGGCTAATGGCGTCCTGTACGA
AGGGACAACCTTAGGGCTGGCTGTCCCTTCGTATATGGATGATGTGGAAACAATTGGGGACTTAGCTGGCTATTTCGACG
AGCTAAAGGGAACAATCACAGGGATTGATCCAGGCTCGGCGTTAATGCAATTGACGCAAGACGAAGTCATGGACCATTAC
GGCTTGGAAGAGTTTACTTTACAATCCTCTTCTGAACAAGCCATGATTGCCGAGCTAGATGCCCGTTACAAAAACGAGGA
ACCGATTGTCGTCACTCTTTGGAGCCCTCATTGGACATTTGGATCTTACGATTTAAAGTTTCTGGATGACCCAGATCATG
TTTATGGCGAAGAAGATGATATTTACTATATGGCTCGCAATGGTTTGGCAGAAGACGAGCCAGATCTTATTCAATGGCTA
AATAATTCTCATTTTACAGAGGAAACGCTGTCTGAACTTCTTACGCTGCAACAACAGTATGAGGATGATATTGACGGGGC
TGTAGCGGAATGGATCGAAAAACACGAGGATCTAGTTCACGCATGGCTGGAAGGTTAA

Upstream 100 bases:

>100_bases
AAGTCAAACAACAGGCTGAGGCGGACTCACGTTCGTAAGCAATTTTTCGCGCCTTTTTGTATACTAAGCCTGTACCTTAT
TTTATTTCAGGAGGAATGTT

Downstream 100 bases:

>100_bases
ACGTGAAAAACCCCTTCTCTTTTAAAAGAGAAGGGGTTTTTGCTATTCGACTTCCATCGCTTCCTTAGGCGTTAAAAACA
CATCAACCGTGTTGATTTGG

Product: proline/glycine betaine ABC transporter substrate-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 285; Mature: 285

Protein sequence:

>285_residues
MNKITSITGILLAALTLGGCASNEQTITIGHNNYAESIAFAHLWKTLLEDQGYQVELSLVEKAMLFNGVENGDIDIGFNT
WLPFTDQAYVSIDSEEIDVQANGVLYEGTTLGLAVPSYMDDVETIGDLAGYFDELKGTITGIDPGSALMQLTQDEVMDHY
GLEEFTLQSSSEQAMIAELDARYKNEEPIVVTLWSPHWTFGSYDLKFLDDPDHVYGEEDDIYYMARNGLAEDEPDLIQWL
NNSHFTEETLSELLTLQQQYEDDIDGAVAEWIEKHEDLVHAWLEG

Sequences:

>Translated_285_residues
MNKITSITGILLAALTLGGCASNEQTITIGHNNYAESIAFAHLWKTLLEDQGYQVELSLVEKAMLFNGVENGDIDIGFNT
WLPFTDQAYVSIDSEEIDVQANGVLYEGTTLGLAVPSYMDDVETIGDLAGYFDELKGTITGIDPGSALMQLTQDEVMDHY
GLEEFTLQSSSEQAMIAELDARYKNEEPIVVTLWSPHWTFGSYDLKFLDDPDHVYGEEDDIYYMARNGLAEDEPDLIQWL
NNSHFTEETLSELLTLQQQYEDDIDGAVAEWIEKHEDLVHAWLEG
>Mature_285_residues
MNKITSITGILLAALTLGGCASNEQTITIGHNNYAESIAFAHLWKTLLEDQGYQVELSLVEKAMLFNGVENGDIDIGFNT
WLPFTDQAYVSIDSEEIDVQANGVLYEGTTLGLAVPSYMDDVETIGDLAGYFDELKGTITGIDPGSALMQLTQDEVMDHY
GLEEFTLQSSSEQAMIAELDARYKNEEPIVVTLWSPHWTFGSYDLKFLDDPDHVYGEEDDIYYMARNGLAEDEPDLIQWL
NNSHFTEETLSELLTLQQQYEDDIDGAVAEWIEKHEDLVHAWLEG

Specific function: Involved in a multicomponent binding-protein-dependent transport system for glycine betaine [H]

COG id: COG2113

COG function: function code E; ABC-type proline/glycine betaine transport systems, periplasmic components

Gene ontology:

Cell location: Cell membrane; Lipid-anchor [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007210 [H]

Pfam domain/function: PF04069 OpuAC [H]

EC number: NA

Molecular weight: Translated: 31954; Mature: 31954

Theoretical pI: Translated: 3.66; Mature: 3.66

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKITSITGILLAALTLGGCASNEQTITIGHNNYAESIAFAHLWKTLLEDQGYQVELSLV
CCCHHHHHHHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCCEEEHHHH
EKAMLFNGVENGDIDIGFNTWLPFTDQAYVSIDSEEIDVQANGVLYEGTTLGLAVPSYMD
HHHHHHCCCCCCCEEEECCCCCCCCCCEEEEECCCCEEEEECCEEEECCEEEEECCHHHH
DVETIGDLAGYFDELKGTITGIDPGSALMQLTQDEVMDHYGLEEFTLQSSSEQAMIAELD
HHHHHHHHHHHHHHHCCEEECCCCHHHHHHHHHHHHHHHCCCHHEEECCCCCHHHHHHHH
ARYKNEEPIVVTLWSPHWTFGSYDLKFLDDPDHVYGEEDDIYYMARNGLAEDEPDLIQWL
HHCCCCCCEEEEEECCCCCCCCCEEEEECCCCHHCCCCCCEEEEECCCCCCCCCHHHHHH
NNSHFTEETLSELLTLQQQYEDDIDGAVAEWIEKHEDLVHAWLEG
CCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNKITSITGILLAALTLGGCASNEQTITIGHNNYAESIAFAHLWKTLLEDQGYQVELSLV
CCCHHHHHHHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCCEEEHHHH
EKAMLFNGVENGDIDIGFNTWLPFTDQAYVSIDSEEIDVQANGVLYEGTTLGLAVPSYMD
HHHHHHCCCCCCCEEEECCCCCCCCCCEEEEECCCCEEEEECCEEEECCEEEEECCHHHH
DVETIGDLAGYFDELKGTITGIDPGSALMQLTQDEVMDHYGLEEFTLQSSSEQAMIAELD
HHHHHHHHHHHHHHHCCEEECCCCHHHHHHHHHHHHHHHCCCHHEEECCCCCHHHHHHHH
ARYKNEEPIVVTLWSPHWTFGSYDLKFLDDPDHVYGEEDDIYYMARNGLAEDEPDLIQWL
HHCCCCCCEEEEEECCCCCCCCCEEEEECCCCHHCCCCCCEEEEECCCCCCCCCHHHHHH
NNSHFTEETLSELLTLQQQYEDDIDGAVAEWIEKHEDLVHAWLEG
CCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7622480; 8969502; 9384377 [H]