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The map label for this gene is 56965178

Identifier: 56965178

GI number: 56965178

Start: 3541985

End: 3543382

Strand: Direct

Name: 56965178

Synonym: ABC3416

Alternate gene names: NA

Gene position: 3541985-3543382 (Clockwise)

Preceding gene: 56965177

Following gene: 56965179

Centisome position: 82.3

GC content: 40.92

Gene sequence:

>1398_bases
ATGCATTTTCTGCACCTTTTTCCGCGCATACTAAAAAAATTCAAAAATTTGTCCATACGTCAATTTCGCTACGAGATAAA
AGCAAATGTTTGGGTCATTTGCTTGTTGTATGCAATCGTAGGCGTCTGCTTAGTTGCAATTGCTTATTGGCTTGACATGG
AGCTGTCTTTAGGTGGAGCGGTTCCCCACTTTTTTCAGGCAGACTATGAATTGACGCGGCAAATCGTCAGCTCACTCGTA
GCTGGAATCATTACGCTAAATGCATTTACATTAAACTCGATTTTAGTTGTCCTGACGAATTTTTCTGGGCAGTTTACACC
GCGGATGCTGACAACGTTTATTTCTGATAAGCGCACCCAACATGTAATGGGGATTTTTAATTTGGTGTTTGTGTTTATTC
TTTTTTCGTTTTTTCTGCTTGATCAGCAAGTGACCAATTATTACTTTGCGATTCCGACGATGACGGTTCTGTTTATGTTG
AGTGCTGTTGCTGCCTTTATTTATTTCATTAACCACTCTGTTAAATGGATGCAAGTCTCGAATATTATGTTCAATATGAA
ATGCGAATCGAAAAACCAAATACTAGAGACACTTGGAAAAGATTTGGAGCCTTACAGGACACGGGAACCGAATGGATCTC
CGAATGATCTTTGCAACAAGGAGGCGATTACTGTTTGTGCAGCCAAGTCAGGCTACATTCAAATTGTCAATTACAAAAAC
CTCGTACGGTATGCACAAAAAAACGATCTCATCATTCGATTTGAAAGACGGATCGGCGAGTTTGTCTTGGAAGGAACGCC
TTTGATGACTTATTGGGAGAGGGGAAGCAACCATGCAAACGTGGAAAAGCTACGGCAATGGGTATACATTGGCGCAAAAA
AAACAGAAGTTCAAGACCTTGAATTTGGCATTAACAAGCTAAAAGAAATTGCGATTAAGTCGATTGGCAATGACGATCCT
GATACAGCTTCAAATGCCATTTTCCAGTTGACGGATTTGCTTTTGTCGATTTCAAAAGTAACCCGTTTTACGCCTTACTT
GACTGATCAAAAAAATGACCTGCGCGTCATAATTAAAAAAGAAACATTTGAATTTTACCTGTACTCCACCTTCTCCCACA
TCACCATTTATGCCCAAGACGATCCTGTCATCACCAATGATGTCCTTGAAGCCGTTTGCCTTCTTGTCGAGTCAATCGAC
TCTTCTTATTATCAAATTTCTTGGGAATTCGCTCTTATGGTCGCAAAAGGCTATCGCGCTCCTTTCACGTTCAATTATAC
GAGAAGCCATTTTCTTGACAGCCTGGAAAAAATAGCGAACACCACAGGAAACCAAGAGGGATACCGATCGTTTGTGGAAG
AAGTCAAACAACAGGCTGAGGCGGACTCACGTTCGTAA

Upstream 100 bases:

>100_bases
TCTTGACTCCATGAAGCGCCTTCTCGCTGGTTTGATATGGGGCGAACAGGGGTAAAGGACATTGTCTTGCTATAATCAAC
TAGATGAAAGGAAAAAACAA

Downstream 100 bases:

>100_bases
GCAATTTTTCGCGCCTTTTTGTATACTAAGCCTGTACCTTATTTTATTTCAGGAGGAATGTTGTGAACAAAATAACAAGC
ATAACGGGAATTCTTTTGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 465; Mature: 465

Protein sequence:

>465_residues
MHFLHLFPRILKKFKNLSIRQFRYEIKANVWVICLLYAIVGVCLVAIAYWLDMELSLGGAVPHFFQADYELTRQIVSSLV
AGIITLNAFTLNSILVVLTNFSGQFTPRMLTTFISDKRTQHVMGIFNLVFVFILFSFFLLDQQVTNYYFAIPTMTVLFML
SAVAAFIYFINHSVKWMQVSNIMFNMKCESKNQILETLGKDLEPYRTREPNGSPNDLCNKEAITVCAAKSGYIQIVNYKN
LVRYAQKNDLIIRFERRIGEFVLEGTPLMTYWERGSNHANVEKLRQWVYIGAKKTEVQDLEFGINKLKEIAIKSIGNDDP
DTASNAIFQLTDLLLSISKVTRFTPYLTDQKNDLRVIIKKETFEFYLYSTFSHITIYAQDDPVITNDVLEAVCLLVESID
SSYYQISWEFALMVAKGYRAPFTFNYTRSHFLDSLEKIANTTGNQEGYRSFVEEVKQQAEADSRS

Sequences:

>Translated_465_residues
MHFLHLFPRILKKFKNLSIRQFRYEIKANVWVICLLYAIVGVCLVAIAYWLDMELSLGGAVPHFFQADYELTRQIVSSLV
AGIITLNAFTLNSILVVLTNFSGQFTPRMLTTFISDKRTQHVMGIFNLVFVFILFSFFLLDQQVTNYYFAIPTMTVLFML
SAVAAFIYFINHSVKWMQVSNIMFNMKCESKNQILETLGKDLEPYRTREPNGSPNDLCNKEAITVCAAKSGYIQIVNYKN
LVRYAQKNDLIIRFERRIGEFVLEGTPLMTYWERGSNHANVEKLRQWVYIGAKKTEVQDLEFGINKLKEIAIKSIGNDDP
DTASNAIFQLTDLLLSISKVTRFTPYLTDQKNDLRVIIKKETFEFYLYSTFSHITIYAQDDPVITNDVLEAVCLLVESID
SSYYQISWEFALMVAKGYRAPFTFNYTRSHFLDSLEKIANTTGNQEGYRSFVEEVKQQAEADSRS
>Mature_465_residues
MHFLHLFPRILKKFKNLSIRQFRYEIKANVWVICLLYAIVGVCLVAIAYWLDMELSLGGAVPHFFQADYELTRQIVSSLV
AGIITLNAFTLNSILVVLTNFSGQFTPRMLTTFISDKRTQHVMGIFNLVFVFILFSFFLLDQQVTNYYFAIPTMTVLFML
SAVAAFIYFINHSVKWMQVSNIMFNMKCESKNQILETLGKDLEPYRTREPNGSPNDLCNKEAITVCAAKSGYIQIVNYKN
LVRYAQKNDLIIRFERRIGEFVLEGTPLMTYWERGSNHANVEKLRQWVYIGAKKTEVQDLEFGINKLKEIAIKSIGNDDP
DTASNAIFQLTDLLLSISKVTRFTPYLTDQKNDLRVIIKKETFEFYLYSTFSHITIYAQDDPVITNDVLEAVCLLVESID
SSYYQISWEFALMVAKGYRAPFTFNYTRSHFLDSLEKIANTTGNQEGYRSFVEEVKQQAEADSRS

Specific function: Unknown

COG id: COG4325

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018723 [H]

Pfam domain/function: PF10011 DUF2254 [H]

EC number: NA

Molecular weight: Translated: 53649; Mature: 53649

Theoretical pI: Translated: 7.52; Mature: 7.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHFLHLFPRILKKFKNLSIRQFRYEIKANVWVICLLYAIVGVCLVAIAYWLDMELSLGGA
CCHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHEECCCC
VPHFFQADYELTRQIVSSLVAGIITLNAFTLNSILVVLTNFSGQFTPRMLTTFISDKRTQ
CCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHCHHHH
HVMGIFNLVFVFILFSFFLLDQQVTNYYFAIPTMTVLFMLSAVAAFIYFINHSVKWMQVS
HHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEE
NIMFNMKCESKNQILETLGKDLEPYRTREPNGSPNDLCNKEAITVCAAKSGYIQIVNYKN
CEEEEEEECCHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCHHEEEEEECCCCEEEECHHH
LVRYAQKNDLIIRFERRIGEFVLEGTPLMTYWERGSNHANVEKLRQWVYIGAKKTEVQDL
HHHHHHCCCEEEEEHHHHHHHHHCCCCHHHHHHCCCCCCCHHHHHHHHHCCCCCCHHHHH
EFGINKLKEIAIKSIGNDDPDTASNAIFQLTDLLLSISKVTRFTPYLTDQKNDLRVIIKK
HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEE
ETFEFYLYSTFSHITIYAQDDPVITNDVLEAVCLLVESIDSSYYQISWEFALMVAKGYRA
CCEEEEEEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCEEEEEHHEEEEEECCCCC
PFTFNYTRSHFLDSLEKIANTTGNQEGYRSFVEEVKQQAEADSRS
CEEECCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MHFLHLFPRILKKFKNLSIRQFRYEIKANVWVICLLYAIVGVCLVAIAYWLDMELSLGGA
CCHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHEECCCC
VPHFFQADYELTRQIVSSLVAGIITLNAFTLNSILVVLTNFSGQFTPRMLTTFISDKRTQ
CCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHCHHHH
HVMGIFNLVFVFILFSFFLLDQQVTNYYFAIPTMTVLFMLSAVAAFIYFINHSVKWMQVS
HHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEE
NIMFNMKCESKNQILETLGKDLEPYRTREPNGSPNDLCNKEAITVCAAKSGYIQIVNYKN
CEEEEEEECCHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCHHEEEEEECCCCEEEECHHH
LVRYAQKNDLIIRFERRIGEFVLEGTPLMTYWERGSNHANVEKLRQWVYIGAKKTEVQDL
HHHHHHCCCEEEEEHHHHHHHHHCCCCHHHHHHCCCCCCCHHHHHHHHHCCCCCCHHHHH
EFGINKLKEIAIKSIGNDDPDTASNAIFQLTDLLLSISKVTRFTPYLTDQKNDLRVIIKK
HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEE
ETFEFYLYSTFSHITIYAQDDPVITNDVLEAVCLLVESIDSSYYQISWEFALMVAKGYRA
CCEEEEEEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCEEEEEHHEEEEEECCCCC
PFTFNYTRSHFLDSLEKIANTTGNQEGYRSFVEEVKQQAEADSRS
CEEECCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]