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The map label for this gene is yuxN [H]

Identifier: 56965168

GI number: 56965168

Start: 3533613

End: 3534485

Strand: Direct

Name: yuxN [H]

Synonym: ABC3406

Alternate gene names: 56965168

Gene position: 3533613-3534485 (Clockwise)

Preceding gene: 56965154

Following gene: 56965174

Centisome position: 82.1

GC content: 43.53

Gene sequence:

>873_bases
ATGAACGAGAAAAAAACAACGATTATCGAAACGGCGATTCACTTATTTGCCGAAAAGGGCTACTTTTCGACGTCTATTCA
AGAAATCGCATCTGAGGCTGGTATATCAAAAGGTGCTTTTTATTTGCATTTTGAGTCAAAAGACAAGCTGCTTATCGACA
TTTACCGCTACTATTACGAAAAGATGTCGACTTTATTGGACCGGATTGAACAAAAAAAGTTAACGCCAAGGCGGGCATTT
CAAACACAAATTGAATTTTTGTTTGCCGAGGTTTCGAAGCATAAAGAGTTTATTATCATGCATTTTCAAGAACAAGTGCT
GCCCATTAGCCACGAGGTGCGACAGTTTGTGTACGAGAAAAAGCTCGAGCACTACAATTGGCAAAAGCGGTCATTGTTAT
CGATCTACGGACAGGAAGCGGAGCGCTATATTCCTGACCTAATCCTGCTGTTTGAAGGACTGAGTCATTCGCTTTTCAAG
CTTCTGCTTCTTACAAAACATCCCCTTAGCCCTAAAAAGGCAGCAACTTATTTGCTAAGGAGGCTCGATAACTTGGCAGA
AGGGCTGGTTGCTGGGGGCGAAGAGCCGTTCGTCTCCGAACAGAGTCTTCAACAGTTAGACTGGCCCTGTTCAGGCAGCA
CCAAGGAGCAAGTTAAGCAAACACTTTCAGCGATTCGAAAACGATTGCCGACTTTGCACATCTCAGAGGAAAAAAAGCAA
GAAGTCCTCGACGCCCTATCTGTATTGCAGGCTGAATTGGATAAAAAAGAGCCTAAGAAAATCATTTTTCAAGGCATGTT
GGCAACAATGGCTACCGTTAAGGAGCTCCGTGAATTGTGCAACTGTGCCGCTAACCTGCTTGACATCCATTAA

Upstream 100 bases:

>100_bases
AGCTTGAATTCCCCTTTTATGACTGAGCGGTCATTTTTGATTGCTTTGTGGCCATCTAATCTGTTACGATAATGGCAACT
CCGAGAGGATGGGAATAGGA

Downstream 100 bases:

>100_bases
CTTTACGCAACCACAAGAGAATAGGTTTCATTTTTTTTACGAACATAAAGCCTGTTCGCTGTCATGTTGAGAACATAAAA
TCCAAAGCAGGCACTCGCCA

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 290; Mature: 290

Protein sequence:

>290_residues
MNEKKTTIIETAIHLFAEKGYFSTSIQEIASEAGISKGAFYLHFESKDKLLIDIYRYYYEKMSTLLDRIEQKKLTPRRAF
QTQIEFLFAEVSKHKEFIIMHFQEQVLPISHEVRQFVYEKKLEHYNWQKRSLLSIYGQEAERYIPDLILLFEGLSHSLFK
LLLLTKHPLSPKKAATYLLRRLDNLAEGLVAGGEEPFVSEQSLQQLDWPCSGSTKEQVKQTLSAIRKRLPTLHISEEKKQ
EVLDALSVLQAELDKKEPKKIIFQGMLATMATVKELRELCNCAANLLDIH

Sequences:

>Translated_290_residues
MNEKKTTIIETAIHLFAEKGYFSTSIQEIASEAGISKGAFYLHFESKDKLLIDIYRYYYEKMSTLLDRIEQKKLTPRRAF
QTQIEFLFAEVSKHKEFIIMHFQEQVLPISHEVRQFVYEKKLEHYNWQKRSLLSIYGQEAERYIPDLILLFEGLSHSLFK
LLLLTKHPLSPKKAATYLLRRLDNLAEGLVAGGEEPFVSEQSLQQLDWPCSGSTKEQVKQTLSAIRKRLPTLHISEEKKQ
EVLDALSVLQAELDKKEPKKIIFQGMLATMATVKELRELCNCAANLLDIH
>Mature_290_residues
MNEKKTTIIETAIHLFAEKGYFSTSIQEIASEAGISKGAFYLHFESKDKLLIDIYRYYYEKMSTLLDRIEQKKLTPRRAF
QTQIEFLFAEVSKHKEFIIMHFQEQVLPISHEVRQFVYEKKLEHYNWQKRSLLSIYGQEAERYIPDLILLFEGLSHSLFK
LLLLTKHPLSPKKAATYLLRRLDNLAEGLVAGGEEPFVSEQSLQQLDWPCSGSTKEQVKQTLSAIRKRLPTLHISEEKKQ
EVLDALSVLQAELDKKEPKKIIFQGMLATMATVKELRELCNCAANLLDIH

Specific function: Potential Regulator Protein For The Acrab Genes. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH tetR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR015893
- InterPro:   IPR001647 [H]

Pfam domain/function: PF00440 TetR_N [H]

EC number: NA

Molecular weight: Translated: 33664; Mature: 33664

Theoretical pI: Translated: 8.10; Mature: 8.10

Prosite motif: PS01081 HTH_TETR_1 ; PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNEKKTTIIETAIHLFAEKGYFSTSIQEIASEAGISKGAFYLHFESKDKLLIDIYRYYYE
CCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHH
KMSTLLDRIEQKKLTPRRAFQTQIEFLFAEVSKHKEFIIMHFQEQVLPISHEVRQFVYEK
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCHHHEEEHHHHHHCCHHHHHHHHHHHH
KLEHYNWQKRSLLSIYGQEAERYIPDLILLFEGLSHSLFKLLLLTKHPLSPKKAATYLLR
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
RLDNLAEGLVAGGEEPFVSEQSLQQLDWPCSGSTKEQVKQTLSAIRKRLPTLHISEEKKQ
HHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHH
EVLDALSVLQAELDKKEPKKIIFQGMLATMATVKELRELCNCAANLLDIH
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNEKKTTIIETAIHLFAEKGYFSTSIQEIASEAGISKGAFYLHFESKDKLLIDIYRYYYE
CCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHH
KMSTLLDRIEQKKLTPRRAFQTQIEFLFAEVSKHKEFIIMHFQEQVLPISHEVRQFVYEK
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCHHHEEEHHHHHHCCHHHHHHHHHHHH
KLEHYNWQKRSLLSIYGQEAERYIPDLILLFEGLSHSLFKLLLLTKHPLSPKKAATYLLR
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
RLDNLAEGLVAGGEEPFVSEQSLQQLDWPCSGSTKEQVKQTLSAIRKRLPTLHISEEKKQ
HHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHH
EVLDALSVLQAELDKKEPKKIIFQGMLATMATVKELRELCNCAANLLDIH
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9639930; 9353931; 9384377; 3923430 [H]