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The map label for this gene is yobV [H]

Identifier: 56965148

GI number: 56965148

Start: 3513730

End: 3514695

Strand: Direct

Name: yobV [H]

Synonym: ABC3386

Alternate gene names: 56965148

Gene position: 3513730-3514695 (Clockwise)

Preceding gene: 56965146

Following gene: 56965149

Centisome position: 81.64

GC content: 47.31

Gene sequence:

>966_bases
ATGAGAGCTGAAAGACTCTTATCAATCGTATTGTTGTTGCAAAACCGAAAAATCATTTCGACAAAAGCATTAGCCGAGGA
ACTTGGCGTTTCAGAGCGGACGGTCCACCGCGATATGGATGCATTAAGCAGTGCAGGCATTCCTGTTTATGCGGAGCGTG
GAAAAACGGGAGGCTGGAAGCTTCTAGATGGTTACAGAACACAGTTGACTGGTCTAACAAAAGAGGAAGTAAAAACGCTG
TTTCTTTCCCCACCAATCGACTTGCTTGGCGACTTAGGCTACACAAAAAACTGGCAAGAAGCGCGCGAAAAGTTGCTGGC
TTCTTTATCCTCTGCCACCTCTGTTGACTTTGCCGACGCACAAAACCGCATCTACATTGACGCTAGCACTTGGCGTGGCA
AAAAAGAAACCGTCGAGGCATTCAGTTTGCTTAACCAAGGGCTGTGGGAACAGCGCGCCCTGTCTATCTCTTATGAAAAA
TACGGGTCTACTGCATCAGAACGTGAAGTGGAGCCTTTAGGGCTCGTCGCCAAAGGCAGTACTTGGTACTTGATCGCAGC
TGAACAACAAGAACTGAAAACATTTAGGGCGTCCCGGATTCGTTCGGCACAGCTTTTGCCAAAGCGGTTTGAACGGCCAG
AAAACTTCGATTTGGCCCGCTACTGGCATGACTCAAAAAACGCGTTTATTCGAACACTGCCTTCCTATGAAGTTAACCTT
CTCATTGCCTATGAACAAAAAGATATGTTGCACAACTCAGGCCGTTATGTCCGTGTGCTCGACCTCTATGAATCAGGCGA
AGACGGCTGGCTAACTGCTAGGCTGTCTTTCGATACAAAAGAGGAGGCAGCAGCCTATATTGTTGGCTTCGGAAACAAGG
TGAAAATGATTTCCCCGACCGAGTTAAAAAAACACGTTTGGATGATTGCCGAACAAGCCTTAAAAGCCCATGCTGATATT
GGCTGA

Upstream 100 bases:

>100_bases
AGCATTCATTTGCATATTCCTCCTTCCTCATGTATGTTTACTATATCCACTAAAGTTGACACCTAATGTCATATATAAAA
AAGAAAAAGGCGTGGTTGAA

Downstream 100 bases:

>100_bases
TCTCATTTTTGTTTTCGACGTTTTAAAAAGAGGAATTTGTGATATAGTCCTGTAGCACATGAACATTCCAAGGAGGGGGA
CGAAAACATGCAGTTCCGTA

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 321; Mature: 321

Protein sequence:

>321_residues
MRAERLLSIVLLLQNRKIISTKALAEELGVSERTVHRDMDALSSAGIPVYAERGKTGGWKLLDGYRTQLTGLTKEEVKTL
FLSPPIDLLGDLGYTKNWQEAREKLLASLSSATSVDFADAQNRIYIDASTWRGKKETVEAFSLLNQGLWEQRALSISYEK
YGSTASEREVEPLGLVAKGSTWYLIAAEQQELKTFRASRIRSAQLLPKRFERPENFDLARYWHDSKNAFIRTLPSYEVNL
LIAYEQKDMLHNSGRYVRVLDLYESGEDGWLTARLSFDTKEEAAAYIVGFGNKVKMISPTELKKHVWMIAEQALKAHADI
G

Sequences:

>Translated_321_residues
MRAERLLSIVLLLQNRKIISTKALAEELGVSERTVHRDMDALSSAGIPVYAERGKTGGWKLLDGYRTQLTGLTKEEVKTL
FLSPPIDLLGDLGYTKNWQEAREKLLASLSSATSVDFADAQNRIYIDASTWRGKKETVEAFSLLNQGLWEQRALSISYEK
YGSTASEREVEPLGLVAKGSTWYLIAAEQQELKTFRASRIRSAQLLPKRFERPENFDLARYWHDSKNAFIRTLPSYEVNL
LIAYEQKDMLHNSGRYVRVLDLYESGEDGWLTARLSFDTKEEAAAYIVGFGNKVKMISPTELKKHVWMIAEQALKAHADI
G
>Mature_321_residues
MRAERLLSIVLLLQNRKIISTKALAEELGVSERTVHRDMDALSSAGIPVYAERGKTGGWKLLDGYRTQLTGLTKEEVKTL
FLSPPIDLLGDLGYTKNWQEAREKLLASLSSATSVDFADAQNRIYIDASTWRGKKETVEAFSLLNQGLWEQRALSISYEK
YGSTASEREVEPLGLVAKGSTWYLIAAEQQELKTFRASRIRSAQLLPKRFERPENFDLARYWHDSKNAFIRTLPSYEVNL
LIAYEQKDMLHNSGRYVRVLDLYESGEDGWLTARLSFDTKEEAAAYIVGFGNKVKMISPTELKKHVWMIAEQALKAHADI
G

Specific function: Unknown

COG id: COG2378

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH deoR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013196
- InterPro:   IPR001034
- InterPro:   IPR011991 [H]

Pfam domain/function: PF08279 HTH_11 [H]

EC number: NA

Molecular weight: Translated: 36385; Mature: 36385

Theoretical pI: Translated: 8.60; Mature: 8.60

Prosite motif: PS00894 HTH_DEOR_1 ; PS51000 HTH_DEOR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRAERLLSIVLLLQNRKIISTKALAEELGVSERTVHRDMDALSSAGIPVYAERGKTGGWK
CCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCEEECCCCCCCEE
LLDGYRTQLTGLTKEEVKTLFLSPPIDLLGDLGYTKNWQEAREKLLASLSSATSVDFADA
EECCHHHHHCCCCHHHHHHEECCCCHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCEECCC
QNRIYIDASTWRGKKETVEAFSLLNQGLWEQRALSISYEKYGSTASEREVEPLGLVAKGS
CCEEEEEECCCCCHHHHHHHHHHHHHCHHHHHHHEEEHHHHCCCCCCCCCCCCEEEECCC
TWYLIAAEQQELKTFRASRIRSAQLLPKRFERPENFDLARYWHDSKNAFIRTLPSYEVNL
EEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHEEECCCCCEEEECCCCEEEE
LIAYEQKDMLHNSGRYVRVLDLYESGEDGWLTARLSFDTKEEAAAYIVGFGNKVKMISPT
EEEECCHHHHHCCCCEEEEEEEEECCCCCEEEEEEECCCHHHCEEEEEECCCEEEEECHH
ELKKHVWMIAEQALKAHADIG
HHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MRAERLLSIVLLLQNRKIISTKALAEELGVSERTVHRDMDALSSAGIPVYAERGKTGGWK
CCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCEEECCCCCCCEE
LLDGYRTQLTGLTKEEVKTLFLSPPIDLLGDLGYTKNWQEAREKLLASLSSATSVDFADA
EECCHHHHHCCCCHHHHHHEECCCCHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCEECCC
QNRIYIDASTWRGKKETVEAFSLLNQGLWEQRALSISYEKYGSTASEREVEPLGLVAKGS
CCEEEEEECCCCCHHHHHHHHHHHHHCHHHHHHHEEEHHHHCCCCCCCCCCCCEEEECCC
TWYLIAAEQQELKTFRASRIRSAQLLPKRFERPENFDLARYWHDSKNAFIRTLPSYEVNL
EEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHEEECCCCCEEEECCCCEEEE
LIAYEQKDMLHNSGRYVRVLDLYESGEDGWLTARLSFDTKEEAAAYIVGFGNKVKMISPT
EEEECCHHHHHCCCCEEEEEEEEECCCCCEEEEEEECCCHHHCEEEEEECCCEEEEECHH
ELKKHVWMIAEQALKAHADIG
HHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]