| Definition | Bacillus clausii KSM-K16, complete genome. |
|---|---|
| Accession | NC_006582 |
| Length | 4,303,871 |
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The map label for this gene is yxiO [H]
Identifier: 56965014
GI number: 56965014
Start: 3373627
End: 3374904
Strand: Direct
Name: yxiO [H]
Synonym: ABC3250
Alternate gene names: 56965014
Gene position: 3373627-3374904 (Clockwise)
Preceding gene: 56965007
Following gene: 56965015
Centisome position: 78.39
GC content: 44.76
Gene sequence:
>1278_bases ATGAAAACAAGACGGTTTAGTAAACAAGAAAAAAGCTGGATGCTTTACGACTGGGCGAACTCGGCCTATTCGATTATTGT TACGACAGCAGTGTTTCCACTCTTTTTTAAAGCGGTTGCAACAGACTCAGGCTTGAGTGACGCTACGTCAACGGCGTATC TCGGCTACACGATTGCGATTGCCACATTCATTTTGGCGATGCTAAGTCCGATTTTAGGGACGATTGCTGACTACGAAGGC TTGAAAAAACGCTTTTTTGTTTTCTTTTTTTCACTCGGCGCTGGTTCTACCGCTTTGCTCGCGTTTGTGCCTGGCGATCA TTGGCTTATTCTCCTGATCCTCTATACAGTGACGGCAGTTGGCTTTGCTGGCGCCAATGTATTTTACGATGCTTTTTTAG TCGATGTAACCGAAGAAAATCGAATGCATGATATTTCTACACGGGGCTACGGGCTCGGCTATATCGGCAGCTGCATCCCC TTTCTCATTAGCATTGCTTTGATTGTATTGGCACAGTTGGAAATCATCCCACTCTCTTTTTATGCCGCAAGCAAAATTGC ATTTTTGATTACGGCCTTGTGGTGGGCTGCTTTCACGATTCCGATGCTTAAGCATGTGACGCAACGTTACTACAAAAAAC GGGAAGCGAGACCGATTGCCAATAGTTTTAAACAGCTTGGGCAAACATTTAAAGAAGTGCGCCAATACAAACCGTTGTTT TTATTTTTGTTGGCCTATTTCTTTTACATTGACGGGGTAGGCACGATTATTCGCATGTCTACTGCTTATGGCAGTGATCT CGGAATTAGCGCAACCGATTTGTTAATTGTCTTATTTGTCACGCAAATCGTCGCTGCCCCTTGTTCAATTCTTTACGGCA GGCTGTCACAGCGCTTTACAGGCAAAAAAATGCTTTATGCCGGCATATGCGTCTATATTGTTGTTTGCGTGTATGCGTTT TTCTTACGGACCACACTTGATTTTTGGATTTTGGCGATGCTAGTTGCCACTTCACAAGGGGGCATCCAAGCATTAAGCCG ATCGTATTTTGCGAAGCTCGTTCCTAAACAGAAAGCAAATGAGTTTTTTGGCTTTTATAACGTGTTCGGCAAATTCGCCG CCGTGATGGGCCCCCTCTTGCTCGGACTCACGACGCAATTGACAGGCAATACCAATGCAGGTGTCTTTAGCCTGATCGCA TTGTTTTTAATCGGCTTTGCTTTGCTAGCAAAAGTGCCTGAACCGAAAGACGAACAGCGCCATTCATACGCTAGTTAA
Upstream 100 bases:
>100_bases TCTTTACAATCACTGTATATACTTATAGCATGTACGCAAAAACATATTTTTCTTTGCCGCCACAGCTAAACGATAAACGA CTATGCCAGGAGGATAACCA
Downstream 100 bases:
>100_bases CTACGTTTAAAAAGATGAAGCAATTTGACAATCTCCCATCAGAAATCGACAAGAATAAACACGCCTTATTCTTATAAAAC GTGTATGATTTAGCTTGAAC
Product: major facilitator (MFS) superfamily protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 425; Mature: 425
Protein sequence:
>425_residues MKTRRFSKQEKSWMLYDWANSAYSIIVTTAVFPLFFKAVATDSGLSDATSTAYLGYTIAIATFILAMLSPILGTIADYEG LKKRFFVFFFSLGAGSTALLAFVPGDHWLILLILYTVTAVGFAGANVFYDAFLVDVTEENRMHDISTRGYGLGYIGSCIP FLISIALIVLAQLEIIPLSFYAASKIAFLITALWWAAFTIPMLKHVTQRYYKKREARPIANSFKQLGQTFKEVRQYKPLF LFLLAYFFYIDGVGTIIRMSTAYGSDLGISATDLLIVLFVTQIVAAPCSILYGRLSQRFTGKKMLYAGICVYIVVCVYAF FLRTTLDFWILAMLVATSQGGIQALSRSYFAKLVPKQKANEFFGFYNVFGKFAAVMGPLLLGLTTQLTGNTNAGVFSLIA LFLIGFALLAKVPEPKDEQRHSYAS
Sequences:
>Translated_425_residues MKTRRFSKQEKSWMLYDWANSAYSIIVTTAVFPLFFKAVATDSGLSDATSTAYLGYTIAIATFILAMLSPILGTIADYEG LKKRFFVFFFSLGAGSTALLAFVPGDHWLILLILYTVTAVGFAGANVFYDAFLVDVTEENRMHDISTRGYGLGYIGSCIP FLISIALIVLAQLEIIPLSFYAASKIAFLITALWWAAFTIPMLKHVTQRYYKKREARPIANSFKQLGQTFKEVRQYKPLF LFLLAYFFYIDGVGTIIRMSTAYGSDLGISATDLLIVLFVTQIVAAPCSILYGRLSQRFTGKKMLYAGICVYIVVCVYAF FLRTTLDFWILAMLVATSQGGIQALSRSYFAKLVPKQKANEFFGFYNVFGKFAAVMGPLLLGLTTQLTGNTNAGVFSLIA LFLIGFALLAKVPEPKDEQRHSYAS >Mature_425_residues MKTRRFSKQEKSWMLYDWANSAYSIIVTTAVFPLFFKAVATDSGLSDATSTAYLGYTIAIATFILAMLSPILGTIADYEG LKKRFFVFFFSLGAGSTALLAFVPGDHWLILLILYTVTAVGFAGANVFYDAFLVDVTEENRMHDISTRGYGLGYIGSCIP FLISIALIVLAQLEIIPLSFYAASKIAFLITALWWAAFTIPMLKHVTQRYYKKREARPIANSFKQLGQTFKEVRQYKPLF LFLLAYFFYIDGVGTIIRMSTAYGSDLGISATDLLIVLFVTQIVAAPCSILYGRLSQRFTGKKMLYAGICVYIVVCVYAF FLRTTLDFWILAMLVATSQGGIQALSRSYFAKLVPKQKANEFFGFYNVFGKFAAVMGPLLLGLTTQLTGNTNAGVFSLIA LFLIGFALLAKVPEPKDEQRHSYAS
Specific function: Unknown
COG id: COG2270
COG function: function code R; Permeases of the major facilitator superfamily
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6319811, Length=365, Percent_Identity=23.2876712328767, Blast_Score=74, Evalue=5e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR016196 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47244; Mature: 47244
Theoretical pI: Translated: 9.71; Mature: 9.71
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTRRFSKQEKSWMLYDWANSAYSIIVTTAVFPLFFKAVATDSGLSDATSTAYLGYTIAI CCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH ATFILAMLSPILGTIADYEGLKKRFFVFFFSLGAGSTALLAFVPGDHWLILLILYTVTAV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHHH GFAGANVFYDAFLVDVTEENRMHDISTRGYGLGYIGSCIPFLISIALIVLAQLEIIPLSF HHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEHH YAASKIAFLITALWWAAFTIPMLKHVTQRYYKKREARPIANSFKQLGQTFKEVRQYKPLF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCHHH LFLLAYFFYIDGVGTIIRMSTAYGSDLGISATDLLIVLFVTQIVAAPCSILYGRLSQRFT HHHHHHHHHHHCHHHHHEEHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GKKMLYAGICVYIVVCVYAFFLRTTLDFWILAMLVATSQGGIQALSRSYFAKLVPKQKAN CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHH EFFGFYNVFGKFAAVMGPLLLGLTTQLTGNTNAGVFSLIALFLIGFALLAKVPEPKDEQR HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHH HSYAS CCCCC >Mature Secondary Structure MKTRRFSKQEKSWMLYDWANSAYSIIVTTAVFPLFFKAVATDSGLSDATSTAYLGYTIAI CCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH ATFILAMLSPILGTIADYEGLKKRFFVFFFSLGAGSTALLAFVPGDHWLILLILYTVTAV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHHH GFAGANVFYDAFLVDVTEENRMHDISTRGYGLGYIGSCIPFLISIALIVLAQLEIIPLSF HHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEHH YAASKIAFLITALWWAAFTIPMLKHVTQRYYKKREARPIANSFKQLGQTFKEVRQYKPLF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCHHH LFLLAYFFYIDGVGTIIRMSTAYGSDLGISATDLLIVLFVTQIVAAPCSILYGRLSQRFT HHHHHHHHHHHCHHHHHEEHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GKKMLYAGICVYIVVCVYAFFLRTTLDFWILAMLVATSQGGIQALSRSYFAKLVPKQKAN CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHH EFFGFYNVFGKFAAVMGPLLLGLTTQLTGNTNAGVFSLIALFLIGFALLAKVPEPKDEQR HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHH HSYAS CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8969509; 9384377 [H]