Click here to switch to the map view.

The map label for this gene is 56964279

Identifier: 56964279

GI number: 56964279

Start: 2635872

End: 2636582

Strand: Direct

Name: 56964279

Synonym: ABC2514

Alternate gene names: NA

Gene position: 2635872-2636582 (Clockwise)

Preceding gene: 56964278

Following gene: 56964280

Centisome position: 61.24

GC content: 43.6

Gene sequence:

>711_bases
ATGTCTTTTAACCAGAAAACAAACGTTCATAAAGAACATATTCAACTAAAGCAGCGATTATTGCACTATCGTTCTGAAAC
GGTCAAAAATGAACGGCTGCTTCGTCAGCAGGAGAAGAAATTGCTTGAACAAAAGCGAATTATCGATGGATTGACTGACC
GGCTGGAAGAATTGGCGCAACAAGCTGAAAAAAACAGCGGTGCCGGCGCAAACGACTATGAACAAAATTCTACGAGGCAA
GCGATCATCGTCCCTTATTTTTCGTATTCCATTCTAGTGCCTTCTACTTTCGAAGAAGATGAAACAGTGCTTGTAAAGGG
CCATTTTGTTATCGAAAATAAAGGCACGGCGCCACTGTCCACTCCTATCATTTGCCTTGCCTTTAATAAACCGGAATTGG
CTAATTTGACTGGGAAAATCAATCGCCCCCGTGCGCCTAAAGACCATGTTGCTCAAATGAATGAAAGCGATGGCTGGTCT
TTTTTAGAGGAAAGCGGCGATGCACAAGCAAAAGAAACGGGCCAGTATTGGCTGAAGCCAAAAACAGCGGAAATTCCTGC
CTTATCAACGGTTATGTTTTCTAATTTTGAAATTCAATTGCCTATGGCGGCAACAAGCTCTGTGGCGATGCAAGTGAACG
GTTTTGTATACGGCGACGAACATCCAGAAGGCATTCCTGCTTTGAATGCGATCGCTTTCACCCTTGTTTAG

Upstream 100 bases:

>100_bases
TCTCGTCGCAAATGAATCAGCCATACATACAATAACGAGATGCCGCGTAGTCTGTATTACCAGACTTGTTTTCAATGTCC
GACTTTTTAAGGAGGCGTCT

Downstream 100 bases:

>100_bases
CTGTTTTATTAAATCAGGCGTTGTTAAGCCTGGTTTTTTTATTTTTACCGGTTTCCACCTTCTGTCATTGCACACTCTTT
TAATTCCAAGCATATAACTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 236; Mature: 235

Protein sequence:

>236_residues
MSFNQKTNVHKEHIQLKQRLLHYRSETVKNERLLRQQEKKLLEQKRIIDGLTDRLEELAQQAEKNSGAGANDYEQNSTRQ
AIIVPYFSYSILVPSTFEEDETVLVKGHFVIENKGTAPLSTPIICLAFNKPELANLTGKINRPRAPKDHVAQMNESDGWS
FLEESGDAQAKETGQYWLKPKTAEIPALSTVMFSNFEIQLPMAATSSVAMQVNGFVYGDEHPEGIPALNAIAFTLV

Sequences:

>Translated_236_residues
MSFNQKTNVHKEHIQLKQRLLHYRSETVKNERLLRQQEKKLLEQKRIIDGLTDRLEELAQQAEKNSGAGANDYEQNSTRQ
AIIVPYFSYSILVPSTFEEDETVLVKGHFVIENKGTAPLSTPIICLAFNKPELANLTGKINRPRAPKDHVAQMNESDGWS
FLEESGDAQAKETGQYWLKPKTAEIPALSTVMFSNFEIQLPMAATSSVAMQVNGFVYGDEHPEGIPALNAIAFTLV
>Mature_235_residues
SFNQKTNVHKEHIQLKQRLLHYRSETVKNERLLRQQEKKLLEQKRIIDGLTDRLEELAQQAEKNSGAGANDYEQNSTRQA
IIVPYFSYSILVPSTFEEDETVLVKGHFVIENKGTAPLSTPIICLAFNKPELANLTGKINRPRAPKDHVAQMNESDGWSF
LEESGDAQAKETGQYWLKPKTAEIPALSTVMFSNFEIQLPMAATSSVAMQVNGFVYGDEHPEGIPALNAIAFTLV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26516; Mature: 26385

Theoretical pI: Translated: 5.97; Mature: 5.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFNQKTNVHKEHIQLKQRLLHYRSETVKNERLLRQQEKKLLEQKRIIDGLTDRLEELAQ
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QAEKNSGAGANDYEQNSTRQAIIVPYFSYSILVPSTFEEDETVLVKGHFVIENKGTAPLS
HHHHCCCCCCCCCCCCCCCEEEEEEEEEEEEECCCCCCCCCEEEEEEEEEEECCCCCCCC
TPIICLAFNKPELANLTGKINRPRAPKDHVAQMNESDGWSFLEESGDAQAKETGQYWLKP
CCEEEEEECCCCHHHCCCCCCCCCCCHHHHHHCCCCCCCHHHHHCCCCCCHHCCCEEECC
KTAEIPALSTVMFSNFEIQLPMAATSSVAMQVNGFVYGDEHPEGIPALNAIAFTLV
CCCCCCCHHHEEECCEEEEEECCCCCCEEEEEEEEEECCCCCCCCCHHHHEEEEEC
>Mature Secondary Structure 
SFNQKTNVHKEHIQLKQRLLHYRSETVKNERLLRQQEKKLLEQKRIIDGLTDRLEELAQ
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QAEKNSGAGANDYEQNSTRQAIIVPYFSYSILVPSTFEEDETVLVKGHFVIENKGTAPLS
HHHHCCCCCCCCCCCCCCCEEEEEEEEEEEEECCCCCCCCCEEEEEEEEEEECCCCCCCC
TPIICLAFNKPELANLTGKINRPRAPKDHVAQMNESDGWSFLEESGDAQAKETGQYWLKP
CCEEEEEECCCCHHHCCCCCCCCCCCHHHHHHCCCCCCCHHHHHCCCCCCHHCCCEEECC
KTAEIPALSTVMFSNFEIQLPMAATSSVAMQVNGFVYGDEHPEGIPALNAIAFTLV
CCCCCCCHHHEEECCEEEEEECCCCCCEEEEEEEEEECCCCCCCCCHHHHEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA