Click here to switch to the map view.

The map label for this gene is yobA [C]

Identifier: 56964202

GI number: 56964202

Start: 2565085

End: 2565666

Strand: Direct

Name: yobA [C]

Synonym: ABC2437

Alternate gene names: 56964202

Gene position: 2565085-2565666 (Clockwise)

Preceding gene: 56964194

Following gene: 56964203

Centisome position: 59.6

GC content: 43.99

Gene sequence:

>582_bases
ATGTTTTTTAAACGGTTAAGTCTTGCAGTTTTTCTGTTGTTGCCATTGTTTGTTTTCCCACTCACAGCCGGGGCACACTC
CCATTTTCAATCGTCAACACCTGGTGAAAATGAAGAAGTCAATGAACCTGTTACGGAAATCCAAGTTTCTTTTGATGGCG
GAATTGGCACAGCGGATATGACGATCACAAACACCGACACAGATGAAGAGGCAGCGATCGAGTCCATTGATGTAGATAAC
ACATCGATGACAGCGATTTTGCAGGAACCTCTAAGCAATGGGGCATACACCGTTGAATGGCAAAACATTGGCGACGACGG
CCATTCTTTGGATGGATCTTTTTCGTTTCAAGTAAATGCAGAGGAAGAAACAACTCCTGAGGATGAAAGCATAGCGGAAG
AAAATGCCGCAAACGAAAACGAAGTGAAGCAAGATCGTGACCACGAAGCAAGTGGACCAGGAGAGGATGAAACAAACACA
GCTGGCACGTCTGTTCTTTGGCTTTCTATCATTATTGCTGGCCTTTTTATTGTAGCGCTCGTCATTTTTACCGTGTTACG
CAAACGCAAATCATCAAAATGA

Upstream 100 bases:

>100_bases
CATTGTGAACAATTTATAAACAACGGCTAATTTCATTAAGTGCTCACAATTTCTTGTTATACTAGCATCGCACTTAAAGA
TGAATGGAGGATATTCTTAC

Downstream 100 bases:

>100_bases
CTCGGGCGGTTAAAAAACACTCGTCAAACAATGACGTATGGGAGAGTTTGTCTACAGTCTGAGCCAACCAAACAGCAAAA
AAATTTTCTGCGTGATTCCA

Product: hypothetical protein

Products: NA

Alternate protein names: Copper Resistance Protein

Number of amino acids: Translated: 193; Mature: 193

Protein sequence:

>193_residues
MFFKRLSLAVFLLLPLFVFPLTAGAHSHFQSSTPGENEEVNEPVTEIQVSFDGGIGTADMTITNTDTDEEAAIESIDVDN
TSMTAILQEPLSNGAYTVEWQNIGDDGHSLDGSFSFQVNAEEETTPEDESIAEENAANENEVKQDRDHEASGPGEDETNT
AGTSVLWLSIIIAGLFIVALVIFTVLRKRKSSK

Sequences:

>Translated_193_residues
MFFKRLSLAVFLLLPLFVFPLTAGAHSHFQSSTPGENEEVNEPVTEIQVSFDGGIGTADMTITNTDTDEEAAIESIDVDN
TSMTAILQEPLSNGAYTVEWQNIGDDGHSLDGSFSFQVNAEEETTPEDESIAEENAANENEVKQDRDHEASGPGEDETNT
AGTSVLWLSIIIAGLFIVALVIFTVLRKRKSSK
>Mature_193_residues
MFFKRLSLAVFLLLPLFVFPLTAGAHSHFQSSTPGENEEVNEPVTEIQVSFDGGIGTADMTITNTDTDEEAAIESIDVDN
TSMTAILQEPLSNGAYTVEWQNIGDDGHSLDGSFSFQVNAEEETTPEDESIAEENAANENEVKQDRDHEASGPGEDETNT
AGTSVLWLSIIIAGLFIVALVIFTVLRKRKSSK

Specific function: Unknown

COG id: COG2372

COG function: function code R; Uncharacterized protein, homolog of Cu resistance protein CopC

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20956; Mature: 20956

Theoretical pI: Translated: 3.81; Mature: 3.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFFKRLSLAVFLLLPLFVFPLTAGAHSHFQSSTPGENEEVNEPVTEIQVSFDGGIGTADM
CCHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCCHHEEEEEECCCCCCCEE
TITNTDTDEEAAIESIDVDNTSMTAILQEPLSNGAYTVEWQNIGDDGHSLDGSFSFQVNA
EEECCCCCHHHHHHHCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCEEEEEEEC
EEETTPEDESIAEENAANENEVKQDRDHEASGPGEDETNTAGTSVLWLSIIIAGLFIVAL
CCCCCCCHHHHHHHCCCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
VIFTVLRKRKSSK
HHHHHHHHHHCCC
>Mature Secondary Structure
MFFKRLSLAVFLLLPLFVFPLTAGAHSHFQSSTPGENEEVNEPVTEIQVSFDGGIGTADM
CCHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCCHHEEEEEECCCCCCCEE
TITNTDTDEEAAIESIDVDNTSMTAILQEPLSNGAYTVEWQNIGDDGHSLDGSFSFQVNA
EEECCCCCHHHHHHHCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCEEEEEEEC
EEETTPEDESIAEENAANENEVKQDRDHEASGPGEDETNTAGTSVLWLSIIIAGLFIVAL
CCCCCCCHHHHHHHCCCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
VIFTVLRKRKSSK
HHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Cu [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA