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The map label for this gene is yocC [H]

Identifier: 56963872

GI number: 56963872

Start: 2226264

End: 2226743

Strand: Direct

Name: yocC [H]

Synonym: ABC2107

Alternate gene names: 56963872

Gene position: 2226264-2226743 (Clockwise)

Preceding gene: 56963870

Following gene: 56963875

Centisome position: 51.73

GC content: 44.58

Gene sequence:

>480_bases
GTGACAACAATCGATATACGGGGTGCTGATCAGACAGACATTCAGCTCATCCGTATGCAGCAACAAGTTCGAGAAATTGC
GAAAGAAGAACAGAAAGAAGTGATTGGCGTTGAACAAACGCCCAACGAAGAATGGGTGATTGTGTCCAAAAAAGAACATG
GGCGCACGCTCCAGCTCATGGTTAACGATTGCCATTCGCCCTATGATGGCCATTGGGATTTTGCCCTCCAAGCAGAATAC
GTTAACGCCCATCGTCTCTTTATTGACGATATCAAAGGTGACCCGAACCGTGGTTTTGGTTCCATTTGCATGGCATACTT
AAAAGATGCGGCCTGGCAACACAATTGTTTGATTGAAGGCAAGCTTGCCAAGCGTGATTGGGATCATTTGGATAGACTCA
TCCATTTTTACAAAAAACACCATTTCCATGTCTCCGTCAATAAAGAAACACAATCAGGCCACGTTATTTGGCATGGTTAA

Upstream 100 bases:

>100_bases
ATTTCTTTCATTCCCCCGCCCTCCTAGCCACATTTTTTTGCACCTATACACTTCTTCCTTTATACTAGAACACGGTGTCA
AATTCAAGAGGAGTGATTCT

Downstream 100 bases:

>100_bases
CTGCAAGGACCGAACCCTACAGGACTCGGTCCTTCAAACTGTAACCAAGTGTTTTCTATCAACTTGAGTGCCGTTGTTTT
TTCTTTCAGAATAAATTCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 159; Mature: 158

Protein sequence:

>159_residues
MTTIDIRGADQTDIQLIRMQQQVREIAKEEQKEVIGVEQTPNEEWVIVSKKEHGRTLQLMVNDCHSPYDGHWDFALQAEY
VNAHRLFIDDIKGDPNRGFGSICMAYLKDAAWQHNCLIEGKLAKRDWDHLDRLIHFYKKHHFHVSVNKETQSGHVIWHG

Sequences:

>Translated_159_residues
MTTIDIRGADQTDIQLIRMQQQVREIAKEEQKEVIGVEQTPNEEWVIVSKKEHGRTLQLMVNDCHSPYDGHWDFALQAEY
VNAHRLFIDDIKGDPNRGFGSICMAYLKDAAWQHNCLIEGKLAKRDWDHLDRLIHFYKKHHFHVSVNKETQSGHVIWHG
>Mature_158_residues
TTIDIRGADQTDIQLIRMQQQVREIAKEEQKEVIGVEQTPNEEWVIVSKKEHGRTLQLMVNDCHSPYDGHWDFALQAEYV
NAHRLFIDDIKGDPNRGFGSICMAYLKDAAWQHNCLIEGKLAKRDWDHLDRLIHFYKKHHFHVSVNKETQSGHVIWHG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016181 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18625; Mature: 18494

Theoretical pI: Translated: 6.65; Mature: 6.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTIDIRGADQTDIQLIRMQQQVREIAKEEQKEVIGVEQTPNEEWVIVSKKEHGRTLQLM
CCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCEEEEEECCCCCEEEEE
VNDCHSPYDGHWDFALQAEYVNAHRLFIDDIKGDPNRGFGSICMAYLKDAAWQHNCLIEG
EECCCCCCCCCCCEEEEEEECCEEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCEEEEC
KLAKRDWDHLDRLIHFYKKHHFHVSVNKETQSGHVIWHG
CCCCCCHHHHHHHHHHHHHCEEEEEECCCCCCCEEEEEC
>Mature Secondary Structure 
TTIDIRGADQTDIQLIRMQQQVREIAKEEQKEVIGVEQTPNEEWVIVSKKEHGRTLQLM
CEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCEEEEEECCCCCEEEEE
VNDCHSPYDGHWDFALQAEYVNAHRLFIDDIKGDPNRGFGSICMAYLKDAAWQHNCLIEG
EECCCCCCCCCCCEEEEEEECCEEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCEEEEC
KLAKRDWDHLDRLIHFYKKHHFHVSVNKETQSGHVIWHG
CCCCCCHHHHHHHHHHHHHCEEEEEECCCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]