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The map label for this gene is gerAB [H]

Identifier: 56963787

GI number: 56963787

Start: 2138841

End: 2139929

Strand: Direct

Name: gerAB [H]

Synonym: ABC2022

Alternate gene names: 56963787

Gene position: 2138841-2139929 (Clockwise)

Preceding gene: 56963786

Following gene: 56963788

Centisome position: 49.7

GC content: 39.94

Gene sequence:

>1089_bases
ATGATTCCCAAACAGACGCTATCTACTGTACAGTTAACCGTCTTAACTGCAATCACATTACTCGGCGTGCAATTTTTGAT
TCTGCCACGCGTGCTAACGGTAACGGCAAATTCAACAGACGGCTGGCTAACGATTGTGGCTGGAGCGCTCTATACATTCG
TTCTCACTTGCTTAGCGCTCTACTTCATTGGCCGCCACCATGCAACTGACCTTTATACTTACGGGTATATGACTTTTGGC
AAAATCGGCGGCACGTTGCTTCTTTTTTTAATCAACGTTTACTTTTGGGTAGCTTCAAGCTATCAAATTGCCGCTATGGC
AGAAATGATCCGTTTTTACTTACTGCCATCAACACCGACATCGCTAATTAAAGTGCTCACTTTTTTATTAATTGCCTACT
TGCTAAGCGGAAATTTGCAAACGATTTTGCGTGTCTCGTCGATTATCTTTCCACTCACTCTTTTAGTGGCAGGGACGATT
TTAGTGTTTAGCTTTAAAGAAATGGACATCGGTCATATGAATCCGCCTTTTACGAACGGCGTTGCCAATGTAGTCTTTAA
TCCTAATGGTGTCCTTTTTCCGTTTGAAGGAATTGAAGTAATCTATTTCTTGCTTCCTTTTGTTAACAAAAAAGCTAAAC
CAAAACTTGCTGTTTTTAGCACGCTTGTGCTTATCTCCATCATTTACATTATTACGTATTTGATCGTTGTCTTAAATTTA
GGGGAACGGGAAGTCAAAACACTTGTATGGCCAACGATTTCGTTTATCCAATCGTTTGAAACAGAGGGGATTTTCATTGA
AAGAATGGAAGGGTTTTTGCTCAGCACATGGATCATGCAATTTTTTTCTACGAGCGTCATTTATAGCTTTTTGTCAGGAT
ATTCCCTTCGTAAATATACAAAGCTAAAAAAGTCTTTTTCTGGGATGGCAGTTGCTGTCGCTATTAGCATGGTTATTTCC
TTATGTTTTCAACATACGCTCGATACAAGGATCCTCCGTCTGATAAGTTTCTATGGGTTTGAAGTGATGTTGTTGCTTCC
ATTTGTCTATTTTCTCATTTACTCGGTTAAGAGGAAGGTGGTCCGATGA

Upstream 100 bases:

>100_bases
CAGGCAAGTTCTTTTTTTACAACCAAAAATGGAAGCAAATTTTCCTGTTGTTATCAAAAAAGAGGGCGCTTAAAAAGCCA
AAAGGGAGCGGAGCTTAGCC

Downstream 100 bases:

>100_bases
AACGCCTGTTTTTAGCAAACGTTGCAGTTATCCTGTTATTGTCAGGTTGTTGGGACAGCCGGAATATGGAGGATGTAACG
TTAAACCTTGGCATTGGTGT

Product: spore germination protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 362; Mature: 362

Protein sequence:

>362_residues
MIPKQTLSTVQLTVLTAITLLGVQFLILPRVLTVTANSTDGWLTIVAGALYTFVLTCLALYFIGRHHATDLYTYGYMTFG
KIGGTLLLFLINVYFWVASSYQIAAMAEMIRFYLLPSTPTSLIKVLTFLLIAYLLSGNLQTILRVSSIIFPLTLLVAGTI
LVFSFKEMDIGHMNPPFTNGVANVVFNPNGVLFPFEGIEVIYFLLPFVNKKAKPKLAVFSTLVLISIIYIITYLIVVLNL
GEREVKTLVWPTISFIQSFETEGIFIERMEGFLLSTWIMQFFSTSVIYSFLSGYSLRKYTKLKKSFSGMAVAVAISMVIS
LCFQHTLDTRILRLISFYGFEVMLLLPFVYFLIYSVKRKVVR

Sequences:

>Translated_362_residues
MIPKQTLSTVQLTVLTAITLLGVQFLILPRVLTVTANSTDGWLTIVAGALYTFVLTCLALYFIGRHHATDLYTYGYMTFG
KIGGTLLLFLINVYFWVASSYQIAAMAEMIRFYLLPSTPTSLIKVLTFLLIAYLLSGNLQTILRVSSIIFPLTLLVAGTI
LVFSFKEMDIGHMNPPFTNGVANVVFNPNGVLFPFEGIEVIYFLLPFVNKKAKPKLAVFSTLVLISIIYIITYLIVVLNL
GEREVKTLVWPTISFIQSFETEGIFIERMEGFLLSTWIMQFFSTSVIYSFLSGYSLRKYTKLKKSFSGMAVAVAISMVIS
LCFQHTLDTRILRLISFYGFEVMLLLPFVYFLIYSVKRKVVR
>Mature_362_residues
MIPKQTLSTVQLTVLTAITLLGVQFLILPRVLTVTANSTDGWLTIVAGALYTFVLTCLALYFIGRHHATDLYTYGYMTFG
KIGGTLLLFLINVYFWVASSYQIAAMAEMIRFYLLPSTPTSLIKVLTFLLIAYLLSGNLQTILRVSSIIFPLTLLVAGTI
LVFSFKEMDIGHMNPPFTNGVANVVFNPNGVLFPFEGIEVIYFLLPFVNKKAKPKLAVFSTLVLISIIYIITYLIVVLNL
GEREVKTLVWPTISFIQSFETEGIFIERMEGFLLSTWIMQFFSTSVIYSFLSGYSLRKYTKLKKSFSGMAVAVAISMVIS
LCFQHTLDTRILRLISFYGFEVMLLLPFVYFLIYSVKRKVVR

Specific function: Involved in the germinative response to L-alanine. Could be an amino acid transporter. Forms a complex at the inner spore membrane which acts as a receptor for L-alanine, thus is involved in the stimulation of germination in response to alanine. Can stimu

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the amino acid-polyamine-organocation (APC) superfamily. Spore germination protein (SGP) (TC 2.A.3.9) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004761 [H]

Pfam domain/function: PF03845 Spore_permease [H]

EC number: NA

Molecular weight: Translated: 40886; Mature: 40886

Theoretical pI: Translated: 9.86; Mature: 9.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIPKQTLSTVQLTVLTAITLLGVQFLILPRVLTVTANSTDGWLTIVAGALYTFVLTCLAL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHH
YFIGRHHATDLYTYGYMTFGKIGGTLLLFLINVYFWVASSYQIAAMAEMIRFYLLPSTPT
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHH
SLIKVLTFLLIAYLLSGNLQTILRVSSIIFPLTLLVAGTILVFSFKEMDIGHMNPPFTNG
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
VANVVFNPNGVLFPFEGIEVIYFLLPFVNKKAKPKLAVFSTLVLISIIYIITYLIVVLNL
CEEEEECCCCEEECCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
GEREVKTLVWPTISFIQSFETEGIFIERMEGFLLSTWIMQFFSTSVIYSFLSGYSLRKYT
CCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
KLKKSFSGMAVAVAISMVISLCFQHTLDTRILRLISFYGFEVMLLLPFVYFLIYSVKRKV
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VR
CC
>Mature Secondary Structure
MIPKQTLSTVQLTVLTAITLLGVQFLILPRVLTVTANSTDGWLTIVAGALYTFVLTCLAL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHH
YFIGRHHATDLYTYGYMTFGKIGGTLLLFLINVYFWVASSYQIAAMAEMIRFYLLPSTPT
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHH
SLIKVLTFLLIAYLLSGNLQTILRVSSIIFPLTLLVAGTILVFSFKEMDIGHMNPPFTNG
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
VANVVFNPNGVLFPFEGIEVIYFLLPFVNKKAKPKLAVFSTLVLISIIYIITYLIVVLNL
CEEEEECCCCEEECCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
GEREVKTLVWPTISFIQSFETEGIFIERMEGFLLSTWIMQFFSTSVIYSFLSGYSLRKYT
CCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
KLKKSFSGMAVAVAISMVISLCFQHTLDTRILRLISFYGFEVMLLLPFVYFLIYSVKRKV
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VR
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 3110007; 9639930; 9384377; 8382989 [H]