| Definition | Bacillus clausii KSM-K16, complete genome. |
|---|---|
| Accession | NC_006582 |
| Length | 4,303,871 |
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The map label for this gene is asbF [H]
Identifier: 56963717
GI number: 56963717
Start: 2067891
End: 2068721
Strand: Direct
Name: asbF [H]
Synonym: ABC1952
Alternate gene names: 56963717
Gene position: 2067891-2068721 (Clockwise)
Preceding gene: 56963716
Following gene: 56963719
Centisome position: 48.05
GC content: 46.21
Gene sequence:
>831_bases ATGAATGTGTCGATTTGTACCATTTCTTTTCGCCATGCATTAGTGTCGATCGACCAGCTTGCTGATTGGGCGAAGGCCCA CGATGTCGATGGAATTGAATTGTGGGCCCCTCATGCCCGCCACTTGTTTGCCACTCCATCCTACAATGGCGACTGGCTTA AAAAACAGGGCCTGATCGTACCAATGGTAAGTGATTACTTTCCGCTTTATGAGGAATGGAATACATTAATAGAGGCTGCC AAACAGGCATCACGTCTATTGACGAGATGGAATACGAACCACATCCGCACATTTGCCGGTGCAAAGGGAAGCAAGGATAC GACAAAAGCAGAACGAGCCTATCTTGTAAAACGGTTAGCTTGTCTTTGTGACTACTTTTTCGACAAAGGGCACTATGTGT TGGTTGAAACACATCCCCATACGCTATGTGATACAGTCCCATCCACGCTGCAATTGTTGGCGGAAGTCGATCATCCAGGG TTAGCAATCAATTTTGATGTCCTTCATGTATGGGAAAGCGGAGCGGATGTAAACGGTGCGTTTAAACAATTGCAGCCTCA TATCCGCCATCTGCATGTAAAAAACATTCGCTCGCCAGAAGACTTAGATGTATTTGCGCCTGAAAATGTTTATGCTGCTG CCGGATCTAGAGAGGGAATGGCCGGGCTGTTTAATGGATGCGTTGATTATGAGTCCTTTCTGTCAGCGAATCAATTGGAC GGCGTCAATGTATCGATTGAATGGTTCGGGAACGAACCGTTTCACGTGTTAGAGCAAGACTGCCAGCAATTAATGAAATG GAAAACAGTCCCCAATAGAGTGGTGCATTAG
Upstream 100 bases:
>100_bases TGGAAAAACAAGATCTACGGGAAAGGCGAATCAAACACAGGCTATACGATTATTTTAGGGAATGGCAACAATTACAAGAA ATGGCTAGGGGGGTGAACGC
Downstream 100 bases:
>100_bases AAGAATTGCTTTAACGGGCCGCAGCTCTCTTTTGGGCAATGATCCATGGAACGGCGGCACGCAAGTCCGGGAAGCGTGCG TCTGCTTGGAAATCGTCCTC
Product: hypothetical protein
Products: NA
Alternate protein names: 3-DHS dehydratase; DHSase; Petrobactin biosynthesis protein AsbF [H]
Number of amino acids: Translated: 276; Mature: 276
Protein sequence:
>276_residues MNVSICTISFRHALVSIDQLADWAKAHDVDGIELWAPHARHLFATPSYNGDWLKKQGLIVPMVSDYFPLYEEWNTLIEAA KQASRLLTRWNTNHIRTFAGAKGSKDTTKAERAYLVKRLACLCDYFFDKGHYVLVETHPHTLCDTVPSTLQLLAEVDHPG LAINFDVLHVWESGADVNGAFKQLQPHIRHLHVKNIRSPEDLDVFAPENVYAAAGSREGMAGLFNGCVDYESFLSANQLD GVNVSIEWFGNEPFHVLEQDCQQLMKWKTVPNRVVH
Sequences:
>Translated_276_residues MNVSICTISFRHALVSIDQLADWAKAHDVDGIELWAPHARHLFATPSYNGDWLKKQGLIVPMVSDYFPLYEEWNTLIEAA KQASRLLTRWNTNHIRTFAGAKGSKDTTKAERAYLVKRLACLCDYFFDKGHYVLVETHPHTLCDTVPSTLQLLAEVDHPG LAINFDVLHVWESGADVNGAFKQLQPHIRHLHVKNIRSPEDLDVFAPENVYAAAGSREGMAGLFNGCVDYESFLSANQLD GVNVSIEWFGNEPFHVLEQDCQQLMKWKTVPNRVVH >Mature_276_residues MNVSICTISFRHALVSIDQLADWAKAHDVDGIELWAPHARHLFATPSYNGDWLKKQGLIVPMVSDYFPLYEEWNTLIEAA KQASRLLTRWNTNHIRTFAGAKGSKDTTKAERAYLVKRLACLCDYFFDKGHYVLVETHPHTLCDTVPSTLQLLAEVDHPG LAINFDVLHVWESGADVNGAFKQLQPHIRHLHVKNIRSPEDLDVFAPENVYAAAGSREGMAGLFNGCVDYESFLSANQLD GVNVSIEWFGNEPFHVLEQDCQQLMKWKTVPNRVVH
Specific function: Converts 3-dehydroshikimate to protocatechuate (3,4- dihydroxybenzoate), a biosynthetic unit required for the biosynthesis of petrobactin which is a virulence-associated siderophore produced by B.anthracis [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013022 - InterPro: IPR012307 [H]
Pfam domain/function: PF01261 AP_endonuc_2 [H]
EC number: =4.2.1.118 [H]
Molecular weight: Translated: 31224; Mature: 31224
Theoretical pI: Translated: 6.34; Mature: 6.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNVSICTISFRHALVSIDQLADWAKAHDVDGIELWAPHARHLFATPSYNGDWLKKQGLIV CCEEEEEEEHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEECCCCCCCCHHHCCEEE PMVSDYFPLYEEWNTLIEAAKQASRLLTRWNTNHIRTFAGAKGSKDTTKAERAYLVKRLA EEHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHHHHH CLCDYFFDKGHYVLVETHPHTLCDTVPSTLQLLAEVDHPGLAINFDVLHVWESGADVNGA HHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEECCCCCCCHH FKQLQPHIRHLHVKNIRSPEDLDVFAPENVYAAAGSREGMAGLFNGCVDYESFLSANQLD HHHHHHHHHHHHHHCCCCCCCCEEECCCCEEECCCCCCCHHHHHHHHHHHHHHHCCCCCC GVNVSIEWFGNEPFHVLEQDCQQLMKWKTVPNRVVH CCEEEEEEECCCCHHHHHHHHHHHHHHCCCCHHCCC >Mature Secondary Structure MNVSICTISFRHALVSIDQLADWAKAHDVDGIELWAPHARHLFATPSYNGDWLKKQGLIV CCEEEEEEEHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEECCCCCCCCHHHCCEEE PMVSDYFPLYEEWNTLIEAAKQASRLLTRWNTNHIRTFAGAKGSKDTTKAERAYLVKRLA EEHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHHHHH CLCDYFFDKGHYVLVETHPHTLCDTVPSTLQLLAEVDHPGLAINFDVLHVWESGADVNGA HHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEECCCCCCCHH FKQLQPHIRHLHVKNIRSPEDLDVFAPENVYAAAGSREGMAGLFNGCVDYESFLSANQLD HHHHHHHHHHHHHHCCCCCCCCEEECCCCEEECCCCCCCHHHHHHHHHHHHHHHCCCCCC GVNVSIEWFGNEPFHVLEQDCQQLMKWKTVPNRVVH CCEEEEEEECCCCHHHHHHHHHHHHHHCCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12721629 [H]