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The map label for this gene is 56963619

Identifier: 56963619

GI number: 56963619

Start: 1970318

End: 1971379

Strand: Direct

Name: 56963619

Synonym: ABC1854

Alternate gene names: NA

Gene position: 1970318-1971379 (Clockwise)

Preceding gene: 56963618

Following gene: 56963620

Centisome position: 45.78

GC content: 46.33

Gene sequence:

>1062_bases
ATGAATAAGAAACAAATATTTTTACAACTAGCGCTAGTCATTTTGCTCGGCGCCCTGTGCGTGTTTTTCCTGGCACGGAA
TGTTAGCTTGGAGGCAGCTATTGAAGGCATTCGCCAAGCCCACTTAACTTGGCTTGCTCTTGCCGCGGTTATTCTGTTGT
TGTCGTGGCTCTTGGAAGCAGCCGTTCTAAAAGTGATGGTCGGAAAAAGAGCAAAGCTGGGGTTATTCGACAGCTTTTAT
TCCACAATGATAGGCCAAATGTTTAATCAAATTACACCAATGGCAGCAGGGGGGCAACCTGCACAGCTTTACGTATTAGT
GAAAAAAGGTGTGCCTGGTGGAAGTGCCACGTCGATTTTGTTGATGAAATTTCTCGTCTTCCAAGTCGTGCTTGTGTTAA
GCTTTTCCGGAATTTTAATCGTAGGCTATGGAGCGTTGGCGCAAGCAATGCCACAGTTGAAACTGCTCATGCTGATTGGT
TATGGAGTCCATGTTGTTGTGATTGTGGCGATGTTGCTCGTCGTGTTTTACCGGAAGCTGGCGGAAAAACTTGCCTACGG
GATTCTCTACCCTGTTCGCTTTTTTAGCAAGCGTAAGGCAGTTGAATGGAAAATCAAATTAGGCGGGGCGTTAGTCGATT
TTCATGAAAAAAGCAGGCAACTTGTGCGGAGCAAGCGTGCTCTCTTGGTTACATCTTTGTTAACTACTGCACAACTATTG
CTGTTTTTCAGCGTGCCTTATTTTATTTTTCAGGCACTTGGTGCGCCGAATATCACCCTTTTAATTGGCACAGTGTTCCA
TGCGTTTGTGGTCATGTTTGCAACAGTTGTGCCGACCCCTGGCGGCAGTGGTGCGGCTGAGATGACGTTTAGCGGGCTGT
TCCAGTCTTTTGTATCGCCAGCAACATTGTTAATTGCACTCGTATTTTGGCGGATCCTTACGTCATACAGCTCAATCTTA
GTTGGCTTTGTGCTCATATTAGGGGAGAGCCGCAAAAAAATTAGGCGAGTTAAGGAGAAGGCTGTGGAAGGGGTATCAAT
AAGGAGGCGGCAGAGGTCGTAA

Upstream 100 bases:

>100_bases
GAACGAGCTAAAAAAGGGGCAAGCTTCTACTCAGAAGAACGATTGCTTAACGAGTGGGACGCCTTTTATTCAAGCCTCCT
CAAAATAAGGGAGCCAGTGC

Downstream 100 bases:

>100_bases
CAGGAAAATGATAAGCGCTTGTTGGATAGCCTTTCAAAATCGCCTTCCGTTATGCTATACTGGAGATGTATTCGTTTTCT
TTAAGGCAGATAAAGCAAGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 353; Mature: 353

Protein sequence:

>353_residues
MNKKQIFLQLALVILLGALCVFFLARNVSLEAAIEGIRQAHLTWLALAAVILLLSWLLEAAVLKVMVGKRAKLGLFDSFY
STMIGQMFNQITPMAAGGQPAQLYVLVKKGVPGGSATSILLMKFLVFQVVLVLSFSGILIVGYGALAQAMPQLKLLMLIG
YGVHVVVIVAMLLVVFYRKLAEKLAYGILYPVRFFSKRKAVEWKIKLGGALVDFHEKSRQLVRSKRALLVTSLLTTAQLL
LFFSVPYFIFQALGAPNITLLIGTVFHAFVVMFATVVPTPGGSGAAEMTFSGLFQSFVSPATLLIALVFWRILTSYSSIL
VGFVLILGESRKKIRRVKEKAVEGVSIRRRQRS

Sequences:

>Translated_353_residues
MNKKQIFLQLALVILLGALCVFFLARNVSLEAAIEGIRQAHLTWLALAAVILLLSWLLEAAVLKVMVGKRAKLGLFDSFY
STMIGQMFNQITPMAAGGQPAQLYVLVKKGVPGGSATSILLMKFLVFQVVLVLSFSGILIVGYGALAQAMPQLKLLMLIG
YGVHVVVIVAMLLVVFYRKLAEKLAYGILYPVRFFSKRKAVEWKIKLGGALVDFHEKSRQLVRSKRALLVTSLLTTAQLL
LFFSVPYFIFQALGAPNITLLIGTVFHAFVVMFATVVPTPGGSGAAEMTFSGLFQSFVSPATLLIALVFWRILTSYSSIL
VGFVLILGESRKKIRRVKEKAVEGVSIRRRQRS
>Mature_353_residues
MNKKQIFLQLALVILLGALCVFFLARNVSLEAAIEGIRQAHLTWLALAAVILLLSWLLEAAVLKVMVGKRAKLGLFDSFY
STMIGQMFNQITPMAAGGQPAQLYVLVKKGVPGGSATSILLMKFLVFQVVLVLSFSGILIVGYGALAQAMPQLKLLMLIG
YGVHVVVIVAMLLVVFYRKLAEKLAYGILYPVRFFSKRKAVEWKIKLGGALVDFHEKSRQLVRSKRALLVTSLLTTAQLL
LFFSVPYFIFQALGAPNITLLIGTVFHAFVVMFATVVPTPGGSGAAEMTFSGLFQSFVSPATLLIALVFWRILTSYSSIL
VGFVLILGESRKKIRRVKEKAVEGVSIRRRQRS

Specific function: Unknown

COG id: COG0392

COG function: function code S; Predicted integral membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0104 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022791
- InterPro:   IPR005242 [H]

Pfam domain/function: PF03706 UPF0104 [H]

EC number: NA

Molecular weight: Translated: 38802; Mature: 38802

Theoretical pI: Translated: 11.19; Mature: 11.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKKQIFLQLALVILLGALCVFFLARNVSLEAAIEGIRQAHLTWLALAAVILLLSWLLEA
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AVLKVMVGKRAKLGLFDSFYSTMIGQMFNQITPMAAGGQPAQLYVLVKKGVPGGSATSIL
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCHHHHHH
LMKFLVFQVVLVLSFSGILIVGYGALAQAMPQLKLLMLIGYGVHVVVIVAMLLVVFYRKL
HHHHHHHHHHHHHHCCCHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AEKLAYGILYPVRFFSKRKAVEWKIKLGGALVDFHEKSRQLVRSKRALLVTSLLTTAQLL
HHHHHHHHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LFFSVPYFIFQALGAPNITLLIGTVFHAFVVMFATVVPTPGGSGAAEMTFSGLFQSFVSP
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH
ATLLIALVFWRILTSYSSILVGFVLILGESRKKIRRVKEKAVEGVSIRRRQRS
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHCCC
>Mature Secondary Structure
MNKKQIFLQLALVILLGALCVFFLARNVSLEAAIEGIRQAHLTWLALAAVILLLSWLLEA
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AVLKVMVGKRAKLGLFDSFYSTMIGQMFNQITPMAAGGQPAQLYVLVKKGVPGGSATSIL
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCHHHHHH
LMKFLVFQVVLVLSFSGILIVGYGALAQAMPQLKLLMLIGYGVHVVVIVAMLLVVFYRKL
HHHHHHHHHHHHHHCCCHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AEKLAYGILYPVRFFSKRKAVEWKIKLGGALVDFHEKSRQLVRSKRALLVTSLLTTAQLL
HHHHHHHHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LFFSVPYFIFQALGAPNITLLIGTVFHAFVVMFATVVPTPGGSGAAEMTFSGLFQSFVSP
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH
ATLLIALVFWRILTSYSSILVGFVLILGESRKKIRRVKEKAVEGVSIRRRQRS
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9389475 [H]