Definition Bacillus clausii KSM-K16, complete genome.
Accession NC_006582
Length 4,303,871

Click here to switch to the map view.

The map label for this gene is spoVAD [H]

Identifier: 56963562

GI number: 56963562

Start: 1913738

End: 1914742

Strand: Direct

Name: spoVAD [H]

Synonym: ABC1797

Alternate gene names: 56963562

Gene position: 1913738-1914742 (Clockwise)

Preceding gene: 56963561

Following gene: 56963563

Centisome position: 44.47

GC content: 47.56

Gene sequence:

>1005_bases
ATGGGCCTTTCACATCGGACAATGACATTCTCAAATCCAGTGTATATCCAATCGAGCGGCACGGCAGTCGGCCCAAAAGA
AGGAGCAGGGCCGCTGGCTGGCTCTTTTGATTACCGATACACGGATATTTATTGTGATGAAAAAAGTTGGGAAATGGCAG
AACGTGCATTGATGAAACAAGCGATTAAACAATGTTTAACCAAAAACCATTTATCGATAGACTCTGTTGATTTGTTTGTT
GCCGGAGATTTAAGCAACCAGACGACTGCTTCTAGTTTTGTCGCCCGTGATTTGCAATTGCCATACATCGGTACATATTC
AGCATGCGCCACCTCTGTTGAAACGCTAATCATTAGCGGCGTATGGGTGTCTAGCGGGTTAGCTGATTTGGTGCTCGCAG
CGGCAAGCAGCCATTACGGCGCCTGTGAAAAGCAATTCCGCTATCCGACTGAATTTGCAGTCCAAAAACCAGAAACGGCT
CAGACAACTGTAACTGGAGCAGGCGCTGTTCTACTGGGGAAGAAGCGCACGGAAATTCAATTAACGGAAGCAACGATTGG
CCGTGTCCAAGACCTGGGCATCACTGATCCGATGAGTTTAGGGGCAGCGATGGCACCAGCTGCAGCAGAGGTGACAATCG
GTCATTTGCACAAAACGAATCAGCAAGTAAGTGACTTTGATTTAATTGTGACAGGTGATTTAGCGATATCTGGAAGTGAA
ATTTACCGTAAACTATTGCGAGAGCAAGGCATTTATATAACCGGGCGCTATGAGGATTGTGGTGTTATGATGTACCACTC
TGAGCAACAAGTACTAGCCGGGGGGAGTGGCGCAGGTTGTTCCGCATCTGTTGTATATGGGCATATTTACCATCGCCTTC
TCGCTGGGGAACTAAAACGTGTCCTTGTCGTTGCCACTGGGGCCCTTTTAAGCTCGATGACCGTTTTGCAAAAGCAATCG
ATCCCAGCAATTGCCCATGCAATTGTCCTGGAAAGGAGGAGTTAG

Upstream 100 bases:

>100_bases
TTATTGGCCCGGTGCTTGTTTTCGGCATCAGTACTGCCTACCTCGTCAGTTTTTCCAGACTGTTGATCCGCATGATTTTA
CACTAGAAAAGAGGGAAACT

Downstream 100 bases:

>100_bases
CAAATGGAGTTTTTATGGGCGTTTTTAGTCGGTGGAGCCATTTGTTTAATCGGTCAGGTTTTGCTTGACGCCGCAAAGCT
GACCCCTGTTCAAATGCTCG

Product: stage V sporulation protein AD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 334; Mature: 333

Protein sequence:

>334_residues
MGLSHRTMTFSNPVYIQSSGTAVGPKEGAGPLAGSFDYRYTDIYCDEKSWEMAERALMKQAIKQCLTKNHLSIDSVDLFV
AGDLSNQTTASSFVARDLQLPYIGTYSACATSVETLIISGVWVSSGLADLVLAAASSHYGACEKQFRYPTEFAVQKPETA
QTTVTGAGAVLLGKKRTEIQLTEATIGRVQDLGITDPMSLGAAMAPAAAEVTIGHLHKTNQQVSDFDLIVTGDLAISGSE
IYRKLLREQGIYITGRYEDCGVMMYHSEQQVLAGGSGAGCSASVVYGHIYHRLLAGELKRVLVVATGALLSSMTVLQKQS
IPAIAHAIVLERRS

Sequences:

>Translated_334_residues
MGLSHRTMTFSNPVYIQSSGTAVGPKEGAGPLAGSFDYRYTDIYCDEKSWEMAERALMKQAIKQCLTKNHLSIDSVDLFV
AGDLSNQTTASSFVARDLQLPYIGTYSACATSVETLIISGVWVSSGLADLVLAAASSHYGACEKQFRYPTEFAVQKPETA
QTTVTGAGAVLLGKKRTEIQLTEATIGRVQDLGITDPMSLGAAMAPAAAEVTIGHLHKTNQQVSDFDLIVTGDLAISGSE
IYRKLLREQGIYITGRYEDCGVMMYHSEQQVLAGGSGAGCSASVVYGHIYHRLLAGELKRVLVVATGALLSSMTVLQKQS
IPAIAHAIVLERRS
>Mature_333_residues
GLSHRTMTFSNPVYIQSSGTAVGPKEGAGPLAGSFDYRYTDIYCDEKSWEMAERALMKQAIKQCLTKNHLSIDSVDLFVA
GDLSNQTTASSFVARDLQLPYIGTYSACATSVETLIISGVWVSSGLADLVLAAASSHYGACEKQFRYPTEFAVQKPETAQ
TTVTGAGAVLLGKKRTEIQLTEATIGRVQDLGITDPMSLGAAMAPAAAEVTIGHLHKTNQQVSDFDLIVTGDLAISGSEI
YRKLLREQGIYITGRYEDCGVMMYHSEQQVLAGGSGAGCSASVVYGHIYHRLLAGELKRVLVVATGALLSSMTVLQKQSI
PAIAHAIVLERRS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010894
- InterPro:   IPR016039
- InterPro:   IPR016038 [H]

Pfam domain/function: PF07451 SpoVAD [H]

EC number: NA

Molecular weight: Translated: 35751; Mature: 35620

Theoretical pI: Translated: 6.60; Mature: 6.60

Prosite motif: PS00178 AA_TRNA_LIGASE_I

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGLSHRTMTFSNPVYIQSSGTAVGPKEGAGPLAGSFDYRYTDIYCDEKSWEMAERALMKQ
CCCCCCEEEECCCEEEECCCCCCCCCCCCCCCCCCCCEEEEEEEECCCHHHHHHHHHHHH
AIKQCLTKNHLSIDSVDLFVAGDLSNQTTASSFVARDLQLPYIGTYSACATSVETLIISG
HHHHHHHCCCCCCCCEEEEEEECCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHEEC
VWVSSGLADLVLAAASSHYGACEKQFRYPTEFAVQKPETAQTTVTGAGAVLLGKKRTEIQ
HHHHCCHHHHHHHHHCCCCCCHHHHCCCCHHHHCCCCCCCCEEECCCCEEEECCCCCEEE
LTEATIGRVQDLGITDPMSLGAAMAPAAAEVTIGHLHKTNQQVSDFDLIVTGDLAISGSE
EEHHHHHHHHHCCCCCCHHHCHHHCCCHHEEEEEHHHHCCCCCCCEEEEEECCEEECHHH
IYRKLLREQGIYITGRYEDCGVMMYHSEQQVLAGGSGAGCSASVVYGHIYHRLLAGELKR
HHHHHHHHCCCEEEEEECCCCEEEEECCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHH
VLVVATGALLSSMTVLQKQSIPAIAHAIVLERRS
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHEECCC
>Mature Secondary Structure 
GLSHRTMTFSNPVYIQSSGTAVGPKEGAGPLAGSFDYRYTDIYCDEKSWEMAERALMKQ
CCCCCEEEECCCEEEECCCCCCCCCCCCCCCCCCCCEEEEEEEECCCHHHHHHHHHHHH
AIKQCLTKNHLSIDSVDLFVAGDLSNQTTASSFVARDLQLPYIGTYSACATSVETLIISG
HHHHHHHCCCCCCCCEEEEEEECCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHEEC
VWVSSGLADLVLAAASSHYGACEKQFRYPTEFAVQKPETAQTTVTGAGAVLLGKKRTEIQ
HHHHCCHHHHHHHHHCCCCCCHHHHCCCCHHHHCCCCCCCCEEECCCCEEEECCCCCEEE
LTEATIGRVQDLGITDPMSLGAAMAPAAAEVTIGHLHKTNQQVSDFDLIVTGDLAISGSE
EEHHHHHHHHHCCCCCCHHHCHHHCCCHHEEEEEHHHHCCCCCCCEEEEEECCEEECHHH
IYRKLLREQGIYITGRYEDCGVMMYHSEQQVLAGGSGAGCSASVVYGHIYHRLLAGELKR
HHHHHHHHCCCEEEEEECCCCEEEEECCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHH
VLVVATGALLSSMTVLQKQSIPAIAHAIVLERRS
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3926949; 8969508; 9384377 [H]