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The map label for this gene is drm

Identifier: 56963548

GI number: 56963548

Start: 1902039

End: 1903223

Strand: Direct

Name: drm

Synonym: ABC1783

Alternate gene names: 56963548

Gene position: 1902039-1903223 (Clockwise)

Preceding gene: 56963547

Following gene: 56963549

Centisome position: 44.19

GC content: 45.32

Gene sequence:

>1185_bases
ATGAAGAAACGATTTGAACGGATTTTTTTAATTGTCATGGATTCAGTCGGGATTGGCGAAGCGCCAGATGCTAAAGAGTT
CGGCGATGAAGGAGCGAACACGCTCGGTTCCATTGCAGAGGCTTTTAATGGCCTACATGTGCCTGAGCTAGAAAAGCTTG
GCCTTGGAAAAATTGCTCCTTTAAAAGGGGTAAAAAATGTCCCAACTCCACTGGCAAGCTATGGAATTATGCAAGAAGCG
TCCTTAGGTAAAGATACAATGACAGGTCATTGGGAAATAATGGGCTTACATATTACTAAACCATTCCAAGTGTTTCCAGA
TGGCTTTCCGACGGAGCTCCTTGAGCAACTCAAAAGCGAAACAGGACGCGGTATCATTGGCAATAAAGTCGCATCCGGTA
CAGAGATTTTAGATGAGTTAGGCGAAGAGCATGTGAAAACAGGTGATTTAATTGTCTATACGTCAGCTGATTCAGTTTTG
CAAATTGCCGCCCATGAAGAAGTCGTGCCTTTGGAAGAGCTTTATGACATTTGCGAGAAAGCTCGTAAGTTGACATTAGC
CCCAGAGTATATGGTCGGCCGTGTGATTGCAAGGCCGTTCGTTGGCGAACCAGGCAAGTGGAAGCGGACAGCAAACCGCC
ATGATTATGCATTAAAGCCATTTGGGCGCACAGTGATGAATACGCTTGAAGATGCAGGGCTTGCTTCCATTGCATTAGGC
AAAATTTCTGACATATATGATGGGGAAGGCGTGACAAAAGCAGTCCGCACCACTTCAAATGAGGATGGCATGGACAAGCT
AGCAGAGCAAATAAATACGTCTTTCGAAGGGCTTTGTTTTTTAAATTTAGTCGATTTTGATGCACTTTATGGCCATAGAC
GCGATGTGATCGGGTATGGAGAGGCCATTATGGCATTTGATCAACGACTTGGGGAAATCTTGCCCCAATTAGGAGACGAA
GACTTGCTGATTGTTACAGCCGATCACGGCAATGACCCTACCCATACAGGTACGGACCATACAAGGGAATACGTACCATT
GCTCGTGTACAATAAAGGGATAAAACCAGTCAATCTTGGGAAACGCCGCACATTTGCTGACATAGGGGCAACCGTAGCCG
ACAATTTTCAAGTGGAACGGCCTAGCAACGGAACGAGCTTTTTAACAGAACTAAAGCCTGAGTAA

Upstream 100 bases:

>100_bases
CTCGCGCTTAAGCCTGAATGGAAATTATTGTGATATCCGAGATAATGGGCAAGAGCAGATGGGAAGCTAAAGGTTGAATA
CAGTCGAGAGAAGGGAAATT

Downstream 100 bases:

>100_bases
AAGGTTATTCAGTTAAAAAAGTCGGATCTTAAGCAGGGCAGGCTAGCAAAAAATTATGGCAAGGAAACAGCAGCTGCTTT
TCTTTGCCGTTGGAGGGAGA

Product: phosphopentomutase

Products: NA

Alternate protein names: Phosphodeoxyribomutase

Number of amino acids: Translated: 394; Mature: 394

Protein sequence:

>394_residues
MKKRFERIFLIVMDSVGIGEAPDAKEFGDEGANTLGSIAEAFNGLHVPELEKLGLGKIAPLKGVKNVPTPLASYGIMQEA
SLGKDTMTGHWEIMGLHITKPFQVFPDGFPTELLEQLKSETGRGIIGNKVASGTEILDELGEEHVKTGDLIVYTSADSVL
QIAAHEEVVPLEELYDICEKARKLTLAPEYMVGRVIARPFVGEPGKWKRTANRHDYALKPFGRTVMNTLEDAGLASIALG
KISDIYDGEGVTKAVRTTSNEDGMDKLAEQINTSFEGLCFLNLVDFDALYGHRRDVIGYGEAIMAFDQRLGEILPQLGDE
DLLIVTADHGNDPTHTGTDHTREYVPLLVYNKGIKPVNLGKRRTFADIGATVADNFQVERPSNGTSFLTELKPE

Sequences:

>Translated_394_residues
MKKRFERIFLIVMDSVGIGEAPDAKEFGDEGANTLGSIAEAFNGLHVPELEKLGLGKIAPLKGVKNVPTPLASYGIMQEA
SLGKDTMTGHWEIMGLHITKPFQVFPDGFPTELLEQLKSETGRGIIGNKVASGTEILDELGEEHVKTGDLIVYTSADSVL
QIAAHEEVVPLEELYDICEKARKLTLAPEYMVGRVIARPFVGEPGKWKRTANRHDYALKPFGRTVMNTLEDAGLASIALG
KISDIYDGEGVTKAVRTTSNEDGMDKLAEQINTSFEGLCFLNLVDFDALYGHRRDVIGYGEAIMAFDQRLGEILPQLGDE
DLLIVTADHGNDPTHTGTDHTREYVPLLVYNKGIKPVNLGKRRTFADIGATVADNFQVERPSNGTSFLTELKPE
>Mature_394_residues
MKKRFERIFLIVMDSVGIGEAPDAKEFGDEGANTLGSIAEAFNGLHVPELEKLGLGKIAPLKGVKNVPTPLASYGIMQEA
SLGKDTMTGHWEIMGLHITKPFQVFPDGFPTELLEQLKSETGRGIIGNKVASGTEILDELGEEHVKTGDLIVYTSADSVL
QIAAHEEVVPLEELYDICEKARKLTLAPEYMVGRVIARPFVGEPGKWKRTANRHDYALKPFGRTVMNTLEDAGLASIALG
KISDIYDGEGVTKAVRTTSNEDGMDKLAEQINTSFEGLCFLNLVDFDALYGHRRDVIGYGEAIMAFDQRLGEILPQLGDE
DLLIVTADHGNDPTHTGTDHTREYVPLLVYNKGIKPVNLGKRRTFADIGATVADNFQVERPSNGTSFLTELKPE

Specific function: Phosphotransfer between the C1 and C5 carbon atoms of pentose

COG id: COG1015

COG function: function code G; Phosphopentomutase

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phosphopentomutase family

Homologues:

Organism=Escherichia coli, GI1790843, Length=397, Percent_Identity=46.8513853904282, Blast_Score=322, Evalue=3e-89,
Organism=Escherichia coli, GI1789781, Length=407, Percent_Identity=28.992628992629, Blast_Score=144, Evalue=7e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): DEOB_BACSK (Q5WH37)

Other databases:

- EMBL:   AP006627
- RefSeq:   YP_175279.1
- ProteinModelPortal:   Q5WH37
- SMR:   Q5WH37
- STRING:   Q5WH37
- EnsemblBacteria:   EBBACT00000049696
- GeneID:   3202336
- GenomeReviews:   AP006627_GR
- KEGG:   bcl:ABC1783
- NMPDR:   fig|66692.3.peg.1731
- eggNOG:   COG1015
- GeneTree:   EBGT00050000001645
- HOGENOM:   HBG644230
- OMA:   CHASGTE
- ProtClustDB:   PRK05362
- BioCyc:   BCLA66692:ABC1783-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_00740
- InterPro:   IPR017849
- InterPro:   IPR017850
- InterPro:   IPR010045
- InterPro:   IPR006124
- Gene3D:   G3DSA:3.40.720.10
- PIRSF:   PIRSF001491
- TIGRFAMs:   TIGR01696

Pfam domain/function: PF01676 Metalloenzyme; SSF53649 Alkaline_phosphatase_core

EC number: =5.4.2.7

Molecular weight: Translated: 43129; Mature: 43129

Theoretical pI: Translated: 4.72; Mature: 4.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKRFERIFLIVMDSVGIGEAPDAKEFGDEGANTLGSIAEAFNGLHVPELEKLGLGKIAP
CCCHHHEEEEEEEECCCCCCCCCHHHHCCHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCC
LKGVKNVPTPLASYGIMQEASLGKDTMTGHWEIMGLHITKPFQVFPDGFPTELLEQLKSE
CCCCCCCCCHHHHHCCHHHHCCCCCCCCCCEEEEEEEECCCCEECCCCCHHHHHHHHHHH
TGRGIIGNKVASGTEILDELGEEHVKTGDLIVYTSADSVLQIAAHEEVVPLEELYDICEK
CCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCEEEEHHCCCCCCHHHHHHHHHH
ARKLTLAPEYMVGRVIARPFVGEPGKWKRTANRHDYALKPFGRTVMNTLEDAGLASIALG
HHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEECHHHHHHHHHHHHCCHHHHHHH
KISDIYDGEGVTKAVRTTSNEDGMDKLAEQINTSFEGLCFLNLVDFDALYGHRRDVIGYG
HHHHHCCCCCHHHHHHCCCCCCHHHHHHHHHCCCCCCEEEEEEHHHHHHHCCCCCHHHHH
EAIMAFDQRLGEILPQLGDEDLLIVTADHGNDPTHTGTDHTREYVPLLVYNKGIKPVNLG
HHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCHHHHCEEEEECCCCCCCCCC
KRRTFADIGATVADNFQVERPSNGTSFLTELKPE
CCHHHHHHCCHHHCCEEEECCCCCCHHHHCCCCC
>Mature Secondary Structure
MKKRFERIFLIVMDSVGIGEAPDAKEFGDEGANTLGSIAEAFNGLHVPELEKLGLGKIAP
CCCHHHEEEEEEEECCCCCCCCCHHHHCCHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCC
LKGVKNVPTPLASYGIMQEASLGKDTMTGHWEIMGLHITKPFQVFPDGFPTELLEQLKSE
CCCCCCCCCHHHHHCCHHHHCCCCCCCCCCEEEEEEEECCCCEECCCCCHHHHHHHHHHH
TGRGIIGNKVASGTEILDELGEEHVKTGDLIVYTSADSVLQIAAHEEVVPLEELYDICEK
CCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCEEEEHHCCCCCCHHHHHHHHHH
ARKLTLAPEYMVGRVIARPFVGEPGKWKRTANRHDYALKPFGRTVMNTLEDAGLASIALG
HHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEECHHHHHHHHHHHHCCHHHHHHH
KISDIYDGEGVTKAVRTTSNEDGMDKLAEQINTSFEGLCFLNLVDFDALYGHRRDVIGYG
HHHHHCCCCCHHHHHHCCCCCCHHHHHHHHHCCCCCCEEEEEEHHHHHHHCCCCCHHHHH
EAIMAFDQRLGEILPQLGDEDLLIVTADHGNDPTHTGTDHTREYVPLLVYNKGIKPVNLG
HHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCHHHHCEEEEECCCCCCCCCC
KRRTFADIGATVADNFQVERPSNGTSFLTELKPE
CCHHHHHHCCHHHCCEEEECCCCCCHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA