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The map label for this gene is sodA [H]

Identifier: 56963480

GI number: 56963480

Start: 1842586

End: 1843194

Strand: Direct

Name: sodA [H]

Synonym: ABC1715

Alternate gene names: 56963480

Gene position: 1842586-1843194 (Clockwise)

Preceding gene: 56963479

Following gene: 56963481

Centisome position: 42.81

GC content: 45.48

Gene sequence:

>609_bases
ATGGCTTACAAACTACCAGAATTGCCTTATGCTGCAAATGCACTTGAGCCGCATATTGATGAGGCGACAATGAACATTCA
CCACGGCAAACACCACAATACGTATGTAACAAACTTAAATGCTGCATTGGAAGGGCATGCAGCCCTTGCAGAGAAGAGCA
TTGAAGACTTGGTGGCAAACTTGGATGCTGTTCCAGAAAACATTCGTACAGCGGTTCGCAACAATGGCGGAGGCCATGCA
AACCACACATTTTTTTGGCAAATTTTAAGTCCAAATGGTGGCGGCGAGCCGACTGGTGCTCTAGCAGAAGATATTAAATC
AACTTTCGGCAGCGTTGAAGAATTCAAAAACAAATTTGCAGACGCAGCAAAAGGGCGCTTTGGTTCAGGATGGGCTTGGC
TAGTTGTCAACAACGGCAATTTAGAAATTACAAGCACGCCTAACCAAGATACACCTTTATCTGAAGGGAAAACGCCTATC
CTCGGACTTGACGTCTGGGAACACGCTTACTACTTGAACTACCAAAACCGTCGCCCAGACTACATTGCAGCTTTCTGGAA
TGTCGTCAATTGGGACGAGGTTAGCAAACGTTACGAAGCAGCAAAATAA

Upstream 100 bases:

>100_bases
AATAAATGAGAAAGCGCGAGCATTTTCTTTGCGGAGCGCTGTCTTTAATGGTAATCTAATTGAGAATCGAAGACTATTTG
AAACTGAGGAGGAATTAAAC

Downstream 100 bases:

>100_bases
ATACATGCCAACGAGCCGTGAAGCATTTCGCTTTGCGGCTTTTTCATTGGGCAAAGGCAGAAAAAACGTGCATAGCAGGC
ATTAAAACAGATCACACTAC

Product: manganese superoxide dismutase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 202; Mature: 201

Protein sequence:

>202_residues
MAYKLPELPYAANALEPHIDEATMNIHHGKHHNTYVTNLNAALEGHAALAEKSIEDLVANLDAVPENIRTAVRNNGGGHA
NHTFFWQILSPNGGGEPTGALAEDIKSTFGSVEEFKNKFADAAKGRFGSGWAWLVVNNGNLEITSTPNQDTPLSEGKTPI
LGLDVWEHAYYLNYQNRRPDYIAAFWNVVNWDEVSKRYEAAK

Sequences:

>Translated_202_residues
MAYKLPELPYAANALEPHIDEATMNIHHGKHHNTYVTNLNAALEGHAALAEKSIEDLVANLDAVPENIRTAVRNNGGGHA
NHTFFWQILSPNGGGEPTGALAEDIKSTFGSVEEFKNKFADAAKGRFGSGWAWLVVNNGNLEITSTPNQDTPLSEGKTPI
LGLDVWEHAYYLNYQNRRPDYIAAFWNVVNWDEVSKRYEAAK
>Mature_201_residues
AYKLPELPYAANALEPHIDEATMNIHHGKHHNTYVTNLNAALEGHAALAEKSIEDLVANLDAVPENIRTAVRNNGGGHAN
HTFFWQILSPNGGGEPTGALAEDIKSTFGSVEEFKNKFADAAKGRFGSGWAWLVVNNGNLEITSTPNQDTPLSEGKTPIL
GLDVWEHAYYLNYQNRRPDYIAAFWNVVNWDEVSKRYEAAK

Specific function: Destroys radicals which are normally produced within the cells and which are toxic to biological systems [H]

COG id: COG0605

COG function: function code P; Superoxide dismutase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the iron/manganese superoxide dismutase family [H]

Homologues:

Organism=Homo sapiens, GI67782307, Length=205, Percent_Identity=51.219512195122, Blast_Score=205, Evalue=2e-53,
Organism=Homo sapiens, GI67782305, Length=205, Percent_Identity=51.219512195122, Blast_Score=205, Evalue=2e-53,
Organism=Homo sapiens, GI67782309, Length=204, Percent_Identity=40.6862745098039, Blast_Score=147, Evalue=8e-36,
Organism=Escherichia coli, GI1790342, Length=208, Percent_Identity=54.8076923076923, Blast_Score=234, Evalue=3e-63,
Organism=Escherichia coli, GI1787946, Length=201, Percent_Identity=50.2487562189055, Blast_Score=202, Evalue=1e-53,
Organism=Caenorhabditis elegans, GI17569479, Length=203, Percent_Identity=41.871921182266, Blast_Score=165, Evalue=1e-41,
Organism=Caenorhabditis elegans, GI17506561, Length=205, Percent_Identity=41.4634146341463, Blast_Score=162, Evalue=1e-40,
Organism=Saccharomyces cerevisiae, GI6321796, Length=210, Percent_Identity=43.3333333333333, Blast_Score=156, Evalue=2e-39,
Organism=Drosophila melanogaster, GI17136812, Length=205, Percent_Identity=48.2926829268293, Blast_Score=180, Evalue=7e-46,

Paralogues:

None

Copy number: 2980 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001189
- InterPro:   IPR019833
- InterPro:   IPR019832
- InterPro:   IPR019831 [H]

Pfam domain/function: PF02777 Sod_Fe_C; PF00081 Sod_Fe_N [H]

EC number: =1.15.1.1 [H]

Molecular weight: Translated: 22344; Mature: 22213

Theoretical pI: Translated: 5.51; Mature: 5.51

Prosite motif: PS00088 SOD_MN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
0.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAYKLPELPYAANALEPHIDEATMNIHHGKHHNTYVTNLNAALEGHAALAEKSIEDLVAN
CCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHH
LDAVPENIRTAVRNNGGGHANHTFFWQILSPNGGGEPTGALAEDIKSTFGSVEEFKNKFA
HHCCCHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHCCHHHHHHHHH
DAAKGRFGSGWAWLVVNNGNLEITSTPNQDTPLSEGKTPILGLDVWEHAYYLNYQNRRPD
HHHCCCCCCCEEEEEEECCCEEEEECCCCCCCCCCCCCCEEEEEHHHHEEEEECCCCCCC
YIAAFWNVVNWDEVSKRYEAAK
HHHHHHCCCCHHHHHHHHHCCC
>Mature Secondary Structure 
AYKLPELPYAANALEPHIDEATMNIHHGKHHNTYVTNLNAALEGHAALAEKSIEDLVAN
CCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHH
LDAVPENIRTAVRNNGGGHANHTFFWQILSPNGGGEPTGALAEDIKSTFGSVEEFKNKFA
HHCCCHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHCCHHHHHHHHH
DAAKGRFGSGWAWLVVNNGNLEITSTPNQDTPLSEGKTPILGLDVWEHAYYLNYQNRRPD
HHHCCCCCCCEEEEEEECCCEEEEECCCCCCCCCCCCCCEEEEEHHHHEEEEECCCCCCC
YIAAFWNVVNWDEVSKRYEAAK
HHHHHHCCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11058132 [H]