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The map label for this gene is ybaS [H]

Identifier: 56963381

GI number: 56963381

Start: 1743480

End: 1744442

Strand: Direct

Name: ybaS [H]

Synonym: ABC1616

Alternate gene names: 56963381

Gene position: 1743480-1744442 (Clockwise)

Preceding gene: 56963380

Following gene: 56963384

Centisome position: 40.51

GC content: 47.25

Gene sequence:

>963_bases
ATGAACCAATTCCTACAAAAGTGGCTCCCAGCCATGACACCACTAGCTGTTATTGCTGGCGTACTTGCGAATCAAATGCT
CGCACCTGCAGCCTTTTTGGTGCCATGGATTTTTGCCTGTATGTCGTTTGCAAACAGCATTACAATCCATCCGCGGGAAA
TAAAGCAAGTCTTTCGATTCCCACGATCCTTTTTTCTAACTTTTGTCTCGCTGCAGCTCATTTTGCCGTTTTGTGCTTAT
ATTGCTGGCATTTTGTTGTTTCCAGATGACGTATGGACACAAACAGGCCTTTTGCTCGCTTTTTCCATTCCTACAGGCAT
CGTTTCCCTCATGTGGATTTCGATTTATAAGGGAAACCGGTCGTTGGCGCTTTGTTTAATTTTGGCAAACACATTGGTTG
CGCCCATCTTCATACCGTTAACGCTAGCTGTGTTTCTCGGAACCGAGCTGCCCCTTGATACATTCGGGATTTTTATGGGC
GTCTTTTGGATGGTCGTGGCGCCATCCCTTGCCGCATTGGCTATTAACGCTACAAAACCGGCATGGGTCGACGTCATACA
CGTAGTCGGCGCGCCCTTTACAAAGCTTGGCTTACTTGCGGTCATCCTGTTAAATAGTTCAGTCGCAGCACCTTATTTTT
TGGCGCTTGATATAAAACTGGCCATGATTGTTGCAACGGTACTAGCTTTGGCCATTATCGGCTACTTAACAGGGTTATAT
TTTGCAAAGGCGACAGGCTCTCCTAAAGAGGACCAGGTTAGCATGATGCTGCTTTCAGGAATGCGCAATATCGGTGTCGG
GGCAGCGATTGCGATTGTTTACTTTCCACCAGCTGCCACATTGCCTGTCATTGCCGGGACATTGTTTCAACAAATATTGG
CGGCTTCGTTTGGAAAATGGCAGTCGCTGGCGCCTAAGCGCTCTACCAATCAATATAACGCCGCGAAAAACAGAGATGCC
TGA

Upstream 100 bases:

>100_bases
ACAGTAAGAGAGCGTTCGAAAGGAGAAGCGCTATGCTAGAAGCAATGAGCCTCATCAAACGGCGAGTACGAGAGGAAAAT
AAAAAGACGAGAACAAAGCG

Downstream 100 bases:

>100_bases
TATTTAGGCATCTCTGTTTATTTAACTGCGGCCACGACTATGTTTGTAAAACTCATGAAACAGTTTCATTAACGCCCGTT
TTTCAATCCGGGAGACATAG

Product: sodium-dependent transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 320; Mature: 320

Protein sequence:

>320_residues
MNQFLQKWLPAMTPLAVIAGVLANQMLAPAAFLVPWIFACMSFANSITIHPREIKQVFRFPRSFFLTFVSLQLILPFCAY
IAGILLFPDDVWTQTGLLLAFSIPTGIVSLMWISIYKGNRSLALCLILANTLVAPIFIPLTLAVFLGTELPLDTFGIFMG
VFWMVVAPSLAALAINATKPAWVDVIHVVGAPFTKLGLLAVILLNSSVAAPYFLALDIKLAMIVATVLALAIIGYLTGLY
FAKATGSPKEDQVSMMLLSGMRNIGVGAAIAIVYFPPAATLPVIAGTLFQQILAASFGKWQSLAPKRSTNQYNAAKNRDA

Sequences:

>Translated_320_residues
MNQFLQKWLPAMTPLAVIAGVLANQMLAPAAFLVPWIFACMSFANSITIHPREIKQVFRFPRSFFLTFVSLQLILPFCAY
IAGILLFPDDVWTQTGLLLAFSIPTGIVSLMWISIYKGNRSLALCLILANTLVAPIFIPLTLAVFLGTELPLDTFGIFMG
VFWMVVAPSLAALAINATKPAWVDVIHVVGAPFTKLGLLAVILLNSSVAAPYFLALDIKLAMIVATVLALAIIGYLTGLY
FAKATGSPKEDQVSMMLLSGMRNIGVGAAIAIVYFPPAATLPVIAGTLFQQILAASFGKWQSLAPKRSTNQYNAAKNRDA
>Mature_320_residues
MNQFLQKWLPAMTPLAVIAGVLANQMLAPAAFLVPWIFACMSFANSITIHPREIKQVFRFPRSFFLTFVSLQLILPFCAY
IAGILLFPDDVWTQTGLLLAFSIPTGIVSLMWISIYKGNRSLALCLILANTLVAPIFIPLTLAVFLGTELPLDTFGIFMG
VFWMVVAPSLAALAINATKPAWVDVIHVVGAPFTKLGLLAVILLNSSVAAPYFLALDIKLAMIVATVLALAIIGYLTGLY
FAKATGSPKEDQVSMMLLSGMRNIGVGAAIAIVYFPPAATLPVIAGTLFQQILAASFGKWQSLAPKRSTNQYNAAKNRDA

Specific function: Unknown

COG id: COG0385

COG function: function code R; Predicted Na+-dependent transporter

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002657 [H]

Pfam domain/function: PF01758 SBF [H]

EC number: NA

Molecular weight: Translated: 34555; Mature: 34555

Theoretical pI: Translated: 9.93; Mature: 9.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNQFLQKWLPAMTPLAVIAGVLANQMLAPAAFLVPWIFACMSFANSITIHPREIKQVFRF
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHC
PRSFFLTFVSLQLILPFCAYIAGILLFPDDVWTQTGLLLAFSIPTGIVSLMWISIYKGNR
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCHHEEEECHHHHHHHHHHHHCCCCC
SLALCLILANTLVAPIFIPLTLAVFLGTELPLDTFGIFMGVFWMVVAPSLAALAINATKP
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHEECCCCC
AWVDVIHVVGAPFTKLGLLAVILLNSSVAAPYFLALDIKLAMIVATVLALAIIGYLTGLY
HHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FAKATGSPKEDQVSMMLLSGMRNIGVGAAIAIVYFPPAATLPVIAGTLFQQILAASFGKW
HHHCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCH
QSLAPKRSTNQYNAAKNRDA
HHCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MNQFLQKWLPAMTPLAVIAGVLANQMLAPAAFLVPWIFACMSFANSITIHPREIKQVFRF
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHC
PRSFFLTFVSLQLILPFCAYIAGILLFPDDVWTQTGLLLAFSIPTGIVSLMWISIYKGNR
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCHHEEEECHHHHHHHHHHHHCCCCC
SLALCLILANTLVAPIFIPLTLAVFLGTELPLDTFGIFMGVFWMVVAPSLAALAINATKP
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHEECCCCC
AWVDVIHVVGAPFTKLGLLAVILLNSSVAAPYFLALDIKLAMIVATVLALAIIGYLTGLY
HHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FAKATGSPKEDQVSMMLLSGMRNIGVGAAIAIVYFPPAATLPVIAGTLFQQILAASFGKW
HHHCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCH
QSLAPKRSTNQYNAAKNRDA
HHCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9274029; 9384377 [H]