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The map label for this gene is safA [H]

Identifier: 56963315

GI number: 56963315

Start: 1673798

End: 1675327

Strand: Direct

Name: safA [H]

Synonym: ABC1550

Alternate gene names: 56963315

Gene position: 1673798-1675327 (Clockwise)

Preceding gene: 56963314

Following gene: 56963316

Centisome position: 38.89

GC content: 49.08

Gene sequence:

>1530_bases
GTGAGAATCCATATTGTTCAAAAGGGAGATACTTTATGGAAATTAGCGGAGAAGTATGAAGTCGATTACGAACATTTAAA
AGAAGCGAATCCGAATTTAACCAACCCTGAAATGTTGATGCCAGGCATGAAAGTGAAAGTGCCTGCTGGATCAGTTGCTG
TCCGGAAAGAACAGAAAAAGACGACGCCGAAAGCAAAAGAAGTAGATAAGAAGCCGCAAAAAGCGAAAGAACAATCCGTT
AAACCACCTAAAAAGCCGGAGCTGAAGGCATCAGAGAAAACGCAAGCGGCAAATGTCGCGCCAGCGCCGCCCTATTATGG
CCAAACACAACAAGGTGTAGCAAAACCGCCAGAATATCCGCCGCTTCCGCCAAAGCCGCCTTGTACACCTTGCCAAGGAA
ATGCATTCCAAGAGTTTGCACCACAAGCAAATATGTACCAGCAGTCTTACGCACCAAACCAACAGCTTTACAGCCAGCAA
ATGAATCAACCGCCGTCATACCAGCCACAAGCAAATCAACCACAGTCCTATCAGCCACAGTCATACCAGCCACAAGCGAA
TCAGCCGCAGTCCTATCAGCCACAGTCATACCAGCCACAAGCAAACCAGCCGCAGTCCTATCAGCCACAGTCATACCAGC
CACAAGCGAATCAGCCGCAGTCCTATCAGCCACAGTCATACCAGCCACAAGCAAACCAACCGCAGTCCTATCAGCCACAA
ATATTTCAGCCACAAGCATATGGAGAAAATGCGCAGCTCCAAGCTCAGTCGCATGGGCCTAAACAGCAAGAAAGCGCAGG
CAAACATCAGCCGTTGCCACAGGATAAAAAAGACAACGAGGCGGGCGAATGGAATGGAGTACAGCCACAAGCACATAAGG
GAAGCTCAAAAAGCGGCATTCATGGTCAGCAGTCTCCGTGGGGAAGCAACGCCCCGTTTGTGCAACAAAGCGGGGGACCG
AATCAACAAAGCTATCCGATCCAAGAAAATCAAAACAAAGGTTTTCAAGGGCAACAAAACACAAACTTTACCCCTTGGCC
ACAGCAGGAAAATAAAGGATGGAACCAAGAACAAGCGTATGCCCACCAAGTAGAGATGAACTGGGGACAAAGCAACGGGG
CGCAACCATTTTCTCAGCAAATGGACATTAATTGGGGACAATATCGCTACTCTCCTTATCAAGGAGAAATCGGCGATGCT
GCACCATTCCAGAGCTATCCAGGGTGGCAGCCAGCTGCTTTGCCGCAAATGCCAGTAGCAAACAGCTATCCGCCTCCGCA
AACACCTTTTTTTGCTCCAGGAACATTAAACCAACAGGCAGGACCCTATAGGCAGCCGCCTGTCGGCCAGCTTGATGACC
AATCATACCAGCAGCCCCATTACATGAACCAAGCTCCATCCTTTTTAACGGGGCCTTATGCAGCCCAGCCACAGCAATGG
GCACATCCACAAAGCCCGTATTTGCAAGAGCAGGAATACGAGCCGGAGGAACAAATAAACGCATACGAAGAAGAAGACCA
ACAAGATTAA

Upstream 100 bases:

>100_bases
GAGCAGTTTACACATAAGTATTGGGGAACGTTGCATGTGAACCGATTTTATGCTCTTGCATAGTCTATAGGATGAATGCC
TAGTAAGGAGGGAACAGCCT

Downstream 100 bases:

>100_bases
CGGCTTTTTGACAGCCATAATCTAACAGCGTAGTTCCCCCTTTTTGGTACATACTAAGACCGAAAGGGGGAATTTCCATT
GAAAAAAACAGCTTTATCGT

Product: hypothetical protein

Products: NA

Alternate protein names: Morphogenetic protein safA [H]

Number of amino acids: Translated: 509; Mature: 509

Protein sequence:

>509_residues
MRIHIVQKGDTLWKLAEKYEVDYEHLKEANPNLTNPEMLMPGMKVKVPAGSVAVRKEQKKTTPKAKEVDKKPQKAKEQSV
KPPKKPELKASEKTQAANVAPAPPYYGQTQQGVAKPPEYPPLPPKPPCTPCQGNAFQEFAPQANMYQQSYAPNQQLYSQQ
MNQPPSYQPQANQPQSYQPQSYQPQANQPQSYQPQSYQPQANQPQSYQPQSYQPQANQPQSYQPQSYQPQANQPQSYQPQ
IFQPQAYGENAQLQAQSHGPKQQESAGKHQPLPQDKKDNEAGEWNGVQPQAHKGSSKSGIHGQQSPWGSNAPFVQQSGGP
NQQSYPIQENQNKGFQGQQNTNFTPWPQQENKGWNQEQAYAHQVEMNWGQSNGAQPFSQQMDINWGQYRYSPYQGEIGDA
APFQSYPGWQPAALPQMPVANSYPPPQTPFFAPGTLNQQAGPYRQPPVGQLDDQSYQQPHYMNQAPSFLTGPYAAQPQQW
AHPQSPYLQEQEYEPEEQINAYEEEDQQD

Sequences:

>Translated_509_residues
MRIHIVQKGDTLWKLAEKYEVDYEHLKEANPNLTNPEMLMPGMKVKVPAGSVAVRKEQKKTTPKAKEVDKKPQKAKEQSV
KPPKKPELKASEKTQAANVAPAPPYYGQTQQGVAKPPEYPPLPPKPPCTPCQGNAFQEFAPQANMYQQSYAPNQQLYSQQ
MNQPPSYQPQANQPQSYQPQSYQPQANQPQSYQPQSYQPQANQPQSYQPQSYQPQANQPQSYQPQSYQPQANQPQSYQPQ
IFQPQAYGENAQLQAQSHGPKQQESAGKHQPLPQDKKDNEAGEWNGVQPQAHKGSSKSGIHGQQSPWGSNAPFVQQSGGP
NQQSYPIQENQNKGFQGQQNTNFTPWPQQENKGWNQEQAYAHQVEMNWGQSNGAQPFSQQMDINWGQYRYSPYQGEIGDA
APFQSYPGWQPAALPQMPVANSYPPPQTPFFAPGTLNQQAGPYRQPPVGQLDDQSYQQPHYMNQAPSFLTGPYAAQPQQW
AHPQSPYLQEQEYEPEEQINAYEEEDQQD
>Mature_509_residues
MRIHIVQKGDTLWKLAEKYEVDYEHLKEANPNLTNPEMLMPGMKVKVPAGSVAVRKEQKKTTPKAKEVDKKPQKAKEQSV
KPPKKPELKASEKTQAANVAPAPPYYGQTQQGVAKPPEYPPLPPKPPCTPCQGNAFQEFAPQANMYQQSYAPNQQLYSQQ
MNQPPSYQPQANQPQSYQPQSYQPQANQPQSYQPQSYQPQANQPQSYQPQSYQPQANQPQSYQPQSYQPQANQPQSYQPQ
IFQPQAYGENAQLQAQSHGPKQQESAGKHQPLPQDKKDNEAGEWNGVQPQAHKGSSKSGIHGQQSPWGSNAPFVQQSGGP
NQQSYPIQENQNKGFQGQQNTNFTPWPQQENKGWNQEQAYAHQVEMNWGQSNGAQPFSQQMDINWGQYRYSPYQGEIGDA
APFQSYPGWQPAALPQMPVANSYPPPQTPFFAPGTLNQQAGPYRQPPVGQLDDQSYQQPHYMNQAPSFLTGPYAAQPQQW
AHPQSPYLQEQEYEPEEQINAYEEEDQQD

Specific function: Probably involved in the assembly of some coat protein components implicated in both lysozyme resistance and germination. Could be required for the assembly of CotG. Associates with SpoIVD during the early stage of coat assembly [H]

COG id: COG1388

COG function: function code M; FOG: LysM repeat

Gene ontology:

Cell location: Spore wall, spore cortex. Note=At the coat- cortex interface [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 LysM repeat [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018392
- InterPro:   IPR002482
- InterPro:   IPR014248 [H]

Pfam domain/function: PF01476 LysM [H]

EC number: NA

Molecular weight: Translated: 57484; Mature: 57484

Theoretical pI: Translated: 6.25; Mature: 6.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCCCCCCCCCCCCCHHHHHHHHHHCCCC
>Mature Secondary Structure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CCCCCCCCCCCCCCCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9770294; 9384377 [H]