| Definition | Bacillus clausii KSM-K16, complete genome. |
|---|---|
| Accession | NC_006582 |
| Length | 4,303,871 |
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The map label for this gene is 56963209
Identifier: 56963209
GI number: 56963209
Start: 1555519
End: 1557027
Strand: Direct
Name: 56963209
Synonym: ABC1444
Alternate gene names: NA
Gene position: 1555519-1557027 (Clockwise)
Preceding gene: 56963208
Following gene: 56963214
Centisome position: 36.14
GC content: 47.25
Gene sequence:
>1509_bases ATGAATGGCCATTATCCTTTATTTAAAAAACAAGACATTGATGCTTTTTTTGCTCTTTTTCAAAACAATCTCGCAAACTT TGTTGTCATAACGGTTACCTTACTGGGGATGGGATTTCCAGAGTCTCTTGTCTTCGGGCGAATTATTCCTGGCGTGGCTG TCGCTGTTATTGCCGGAAACCTCTATTATGCACACATGGCCAAACGGCTAGCGAAAAAAGAAAATCGTACAGATGTAACG GCGTTATCTTATGGCGTTTCCACGCCTGTCATGTTTGTGTTTCTATTCGGTGTTACCGCTCCGGCTTTGGCGATGACAAA CGACTACGAACTAGCCTGGAAAATAGCTGTAGCTGCTGCTTTCTTATCAGGCCTTGTTGAAGCGCTTGTTGCTTTTTTTG GCAATTGGGTCAGAAAGCACACGCCGCGTCCGGCGTTATTAGGCGCATTAGCAGGGGTGGCGTTTACGTTTGTTGCCGGG GAAATGTTGTTTTCTGTTTTTGATGTGCCTGTCATTGGCCTTGTGGCCTTGTCGATCATTTTGCTTGGCTTTGTGGCAAA AGTCGGGATGCCGTTTCGCATTCCTACGTCCCTTTTTGCGATCATTATTGGCGTTATACTAGCGTTTGCACTAGGCTACC AATCTAGTTCAGACGTTGGAAACGCGTTTGCCAATGTTGGTTTCTATCCATTTTTGCCAACGTTGGCAGCGTTCGAAGGC ATGTCCGCTTTATTTGGCGTGATGATCGGTTTGCTCGGCATCCTCATTCCTATTACGATTTACAATGCGATTGAAACGAT GAACAATGTTGATGCAATGGCGGCAGCGGGCGACTCGTATGATGTTCGTGAATGCCAAGCAGTAGATGGCGTTGGCGCGA TGCTTGGCGCTTGTTTTGGAGGCATGTTCCCGACAACTGTGTATATTGCAACAGTAGGCGCTAAAGAAATGGGAGCAGGT CGGGGATACAGCATCTTAAATGCGGTGATGTTCTTATTTGCAGCAGCAACTGGTCTTATCGCTGCTTTTTCGGCCCTTAT TCCGATGGCGGCGATTGCGCCGATTCTTGTCTTTGTCGGCATGTCGATGATATCGAGTACTTTTGCCAACAACGAGAAGA AGTACTATCCGGCGGTTGCTTTAGCCATGCTTCCTTATATCGCCAACTACATGATGACACGTTTTAACAATAGCGCAGGG GAAGTGGTGGCAGGCATTTCTGAAGGGATTGTGCCTCTAGGTCAAGGAGCAATGTTTACAGCCATAATCATTGGCGCTAT TACCGTGTGCCTCATTGATCGAACGTTCCACAAAGCGGCGCTTTTTGCCGGGATCGGCGCTGTCCTTGCGTTCTTTGGCT TTACACATGCCCCTTCACTCGCTCTTAATGCCGCTTTCGACTATACGATTGGCTATGCCTTAATTGCGTTGTTCTTTGTC TATATCGGTTTCCGTGAACAAAAGCAAGAAGCCTCGCTAGCGAGAGAACAAGCGACGAAAGCAGCCTAA
Upstream 100 bases:
>100_bases GGCGCGCATTTCTTCACTAGAAGGCAACAAGGTTCAGTTTGTAGAAGAATCGGCACATTTTGCTTACAACAAATCTTAAA AAGGGCGGAATATACAATTT
Downstream 100 bases:
>100_bases AAGTAAAACGTTCAAGCATTGAGACATCCATCACTGTATCATGAATGAATCGCTATAAACAAAAAAGTCGGGAGTGCTCC CGACTTTTTTGTGTTAGTTG
Product: hypothetical protein
Products: NA
Alternate protein names: Permease; MFS Transporter Xanthine/Uracil Permease; Permease Subfamily Putative; Sulphate Transporter; Regulator; Transcriptional Regulator; Permease Subfamily
Number of amino acids: Translated: 502; Mature: 502
Protein sequence:
>502_residues MNGHYPLFKKQDIDAFFALFQNNLANFVVITVTLLGMGFPESLVFGRIIPGVAVAVIAGNLYYAHMAKRLAKKENRTDVT ALSYGVSTPVMFVFLFGVTAPALAMTNDYELAWKIAVAAAFLSGLVEALVAFFGNWVRKHTPRPALLGALAGVAFTFVAG EMLFSVFDVPVIGLVALSIILLGFVAKVGMPFRIPTSLFAIIIGVILAFALGYQSSSDVGNAFANVGFYPFLPTLAAFEG MSALFGVMIGLLGILIPITIYNAIETMNNVDAMAAAGDSYDVRECQAVDGVGAMLGACFGGMFPTTVYIATVGAKEMGAG RGYSILNAVMFLFAAATGLIAAFSALIPMAAIAPILVFVGMSMISSTFANNEKKYYPAVALAMLPYIANYMMTRFNNSAG EVVAGISEGIVPLGQGAMFTAIIIGAITVCLIDRTFHKAALFAGIGAVLAFFGFTHAPSLALNAAFDYTIGYALIALFFV YIGFREQKQEASLAREQATKAA
Sequences:
>Translated_502_residues MNGHYPLFKKQDIDAFFALFQNNLANFVVITVTLLGMGFPESLVFGRIIPGVAVAVIAGNLYYAHMAKRLAKKENRTDVT ALSYGVSTPVMFVFLFGVTAPALAMTNDYELAWKIAVAAAFLSGLVEALVAFFGNWVRKHTPRPALLGALAGVAFTFVAG EMLFSVFDVPVIGLVALSIILLGFVAKVGMPFRIPTSLFAIIIGVILAFALGYQSSSDVGNAFANVGFYPFLPTLAAFEG MSALFGVMIGLLGILIPITIYNAIETMNNVDAMAAAGDSYDVRECQAVDGVGAMLGACFGGMFPTTVYIATVGAKEMGAG RGYSILNAVMFLFAAATGLIAAFSALIPMAAIAPILVFVGMSMISSTFANNEKKYYPAVALAMLPYIANYMMTRFNNSAG EVVAGISEGIVPLGQGAMFTAIIIGAITVCLIDRTFHKAALFAGIGAVLAFFGFTHAPSLALNAAFDYTIGYALIALFFV YIGFREQKQEASLAREQATKAA >Mature_502_residues MNGHYPLFKKQDIDAFFALFQNNLANFVVITVTLLGMGFPESLVFGRIIPGVAVAVIAGNLYYAHMAKRLAKKENRTDVT ALSYGVSTPVMFVFLFGVTAPALAMTNDYELAWKIAVAAAFLSGLVEALVAFFGNWVRKHTPRPALLGALAGVAFTFVAG EMLFSVFDVPVIGLVALSIILLGFVAKVGMPFRIPTSLFAIIIGVILAFALGYQSSSDVGNAFANVGFYPFLPTLAAFEG MSALFGVMIGLLGILIPITIYNAIETMNNVDAMAAAGDSYDVRECQAVDGVGAMLGACFGGMFPTTVYIATVGAKEMGAG RGYSILNAVMFLFAAATGLIAAFSALIPMAAIAPILVFVGMSMISSTFANNEKKYYPAVALAMLPYIANYMMTRFNNSAG EVVAGISEGIVPLGQGAMFTAIIIGAITVCLIDRTFHKAALFAGIGAVLAFFGFTHAPSLALNAAFDYTIGYALIALFFV YIGFREQKQEASLAREQATKAA
Specific function: Unknown
COG id: COG2252
COG function: function code R; Permeases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53107; Mature: 53107
Theoretical pI: Translated: 7.04; Mature: 7.04
Prosite motif: PS00445 FGGY_KINASES_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNGHYPLFKKQDIDAFFALFQNNLANFVVITVTLLGMGFPESLVFGRIIPGVAVAVIAGN CCCCCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH LYYAHMAKRLAKKENRTDVTALSYGVSTPVMFVFLFGVTAPALAMTNDYELAWKIAVAAA HHHHHHHHHHHHHCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH FLSGLVEALVAFFGNWVRKHTPRPALLGALAGVAFTFVAGEMLFSVFDVPVIGLVALSII HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLGFVAKVGMPFRIPTSLFAIIIGVILAFALGYQSSSDVGNAFANVGFYPFLPTLAAFEG HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHH MSALFGVMIGLLGILIPITIYNAIETMNNVDAMAAAGDSYDVRECQAVDGVGAMLGACFG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHC GMFPTTVYIATVGAKEMGAGRGYSILNAVMFLFAAATGLIAAFSALIPMAAIAPILVFVG CCCHHHHHHEECCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MSMISSTFANNEKKYYPAVALAMLPYIANYMMTRFNNSAGEVVAGISEGIVPLGQGAMFT HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCHHHH AIIIGAITVCLIDRTFHKAALFAGIGAVLAFFGFTHAPSLALNAAFDYTIGYALIALFFV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH YIGFREQKQEASLAREQATKAA HHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MNGHYPLFKKQDIDAFFALFQNNLANFVVITVTLLGMGFPESLVFGRIIPGVAVAVIAGN CCCCCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH LYYAHMAKRLAKKENRTDVTALSYGVSTPVMFVFLFGVTAPALAMTNDYELAWKIAVAAA HHHHHHHHHHHHHCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH FLSGLVEALVAFFGNWVRKHTPRPALLGALAGVAFTFVAGEMLFSVFDVPVIGLVALSII HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLGFVAKVGMPFRIPTSLFAIIIGVILAFALGYQSSSDVGNAFANVGFYPFLPTLAAFEG HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHH MSALFGVMIGLLGILIPITIYNAIETMNNVDAMAAAGDSYDVRECQAVDGVGAMLGACFG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHC GMFPTTVYIATVGAKEMGAGRGYSILNAVMFLFAAATGLIAAFSALIPMAAIAPILVFVG CCCHHHHHHEECCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MSMISSTFANNEKKYYPAVALAMLPYIANYMMTRFNNSAGEVVAGISEGIVPLGQGAMFT HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCHHHH AIIIGAITVCLIDRTFHKAALFAGIGAVLAFFGFTHAPSLALNAAFDYTIGYALIALFFV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH YIGFREQKQEASLAREQATKAA HHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA