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The map label for this gene is yobO [H]

Identifier: 56963096

GI number: 56963096

Start: 1448268

End: 1450652

Strand: Direct

Name: yobO [H]

Synonym: ABC1324

Alternate gene names: 56963096

Gene position: 1448268-1450652 (Clockwise)

Preceding gene: 56963094

Following gene: 56963097

Centisome position: 33.65

GC content: 47.34

Gene sequence:

>2385_bases
ATGAAAAACGACGAATGGGAAACATGCGAGGCAAAGGAAGAGGACAAGGCTTTTGAGCATTTGACGAAAACGCTGCAACA
AATTGAGGATGAAAGGGTAGTTTACATCGATGACTTTATTCCTGAAGGGGAAGAAGAAAGTGACCAAACGAAGTATTTTG
AAGAAGCGTTAGGCGACGGAAATGTCAAACTGATTTTAGGGCCAAAACGGTATTATGCCACTGTCAAGCTACCAAGTCGA
ACCGTGTTAGAAGGGCAAGGGATGGAATTAACAACGATCCAAACGCCTAATCATGCGCCAAGTTATGAATGGACGGTGTC
GGTAAAGGATAAGGACAATGGTGCCGAGTATATTGCCGTTCGTCATCTAAGCTTAGACGGTAACCGCAGAAGGGGTGTAG
AGCCAGCCGGAGGTAGCCGTTCCAGTTGCTTAACATTCCATGGTGTAAAGTACGGCTGGGTAAAGGATGTATTTGCCTAC
AACAGCACGTTGCATGGATTTGACGTTACGTCGACCGGTCTAGATTACCACTATGGTGGAGATGGGACCGTTGATTCGGG
GCCTTCCCAATATGTTTGGATTGATGGCTGTAAAGCAACTGACTGGATCGATGATGGATTTACCACTCACCATAGTGAAT
ACATCACCATTTCCAATTGCTATGCCTATGAACCTAACAGTAGAGGAAATGCAAATGGAATTGAGATCGATGACGGAAGC
CGCCATGTGCTTCTATCAAACAATTACTCTATGGGTTGTTATGGGGGTATTGAAATTAAAGCCCATGCCAACTCCAGTGC
AGCGAACAATGTCCATATTCTTGGGCATATTTCTAGGGAAGACACACGTAGCTATAACTTCCGCCATATCGGCCATCATA
CCGGCGATGATCCTGACTCAAAAACGGCCTATCATATTACGGCTACTAATCTCGTATCGCTGCACCCAAACAAAAAAAGG
GGGTTCCAGAACAATACAGATCCCCGTGCTCTTGTGATTAGCGCTTATACCAATGTTAGCATTACCAACTTTACGGCAAT
TGGCGATCTATCCTACGACTTTGGCAATACGCCTGTCATTGCGATTCAATATAAAGCGAAAAATGTATCCCTTAACGGCA
TTAACGTAAGCCGTTTTCATAACGCCAGCGACGCTATCATTGTATTTGGTGGAGGAAACCGTGGCGACCACATTTCCTTG
TCAAATATTCATATTTATGATGCCGGAAAAAATAACGGAATATACGTCGGCAGCGGACATAGCAACGTCTCCATTTCCAA
TGTCAATGCAATTAATTCTAAGGGAGAGGGAGAAAATGCAGTGGAAGCGGCGACAAACTCTGTCAACATTAGCGGTGTAT
CCGTGACTGGATACAAGGATGCTGTCCGCAGCGGTGGTGTGGCCTATAAAGAGCCAATTACAGTGATTAAAGGAGGCGCA
CGGATTGCTTCAAGTACAGGGGCAACTTCCACCGAACAATCGATCATACTTGCTAGCACTTCGTCGCCAACAGCTTCAGC
TTCTAAAACGATGGTGGCTGCCTCATCTAATTCCCACGCAGTTGGCGAAGGGGCAATCGTCCTAGGAAGTGCAGGCAATT
CACGGGCGCAAGGGCCTCGGAGCGGCATCCTTAGCTCCAGCGGCGCGGTTGCTGGCCAGTCAGGAGGGGCGTTTAGCTCG
ATGGTACTTGCGAGTAATTTAGTAGCCAACCCAAATGGCTATTCTGTAGTCGGCGGGTATGGGGCTTCAGGCAACCCAAG
CAGCGCCAATATCAAGTGGGAGCTTAATAGCCGTACTGGTACAGTCCGAGCTGCGGGCACGCTTTCAAGTGCACAGACAT
TTACCGATTATGCCGAGTACTTCGAAAGCATAGATGGAAACCCCATTGCCACTGGCCTGCTTGTCACTCTTGATGGAGAT
AAAATCCGCGTGGCTGAGGAAGGAGACGATATTCTTGGCGCTATTTCTGAAACAGCAGGGGTGGTCCTTGGAGAATCGGC
ACTTTATTGGCAAGGCCGATATTTAACTAACGAGTTTGGCGGCATGGTCTATGAGCCACAAACAATCCGCACGTATGATG
TCGATGAAGACGGCAATACGCTTCCTACGTATACAGAAGAGGTTGTTGAACTGCCGTTAGAAAATCCCCAATATGATCCA
AGCCTGCCTTACACTCCACGCAGTAAACGCCAAGAGTGGAATATCGTCGGGCTAACAGGCCAAATTCACGTCCGTGTCTC
TGACTCCGTCCAGCCAGGAGATTATGTAAAAGCCAACGGTGGAATAGGCGTGCCAGGAGAAAATGGACCGATAAAAGTCA
TGCGTCTTACAAAAGCGTACGATGAGGACAAGGGATATGGTATCGCTTTGTGTTTTATCAAGTAA

Upstream 100 bases:

>100_bases
ACATTTTTAATGTCAGTTTTTTTGTTTTTAGATGGCTTCCTTCTCTTTTAAACGTAACTGCTTTTTACTAGCAGAATAAA
AGAAGGAGGCATTTTCCTTT

Downstream 100 bases:

>100_bases
CCATTCATTGTATAGGAGAGCAGCAGCATTTTTGCTGCTCTTTAATTTATTTTATATTGATGGTTATTTTTTTATTAAAA
AGTATTGACCACCTTACCAA

Product: phage-related pre-neck appendage protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 794; Mature: 794

Protein sequence:

>794_residues
MKNDEWETCEAKEEDKAFEHLTKTLQQIEDERVVYIDDFIPEGEEESDQTKYFEEALGDGNVKLILGPKRYYATVKLPSR
TVLEGQGMELTTIQTPNHAPSYEWTVSVKDKDNGAEYIAVRHLSLDGNRRRGVEPAGGSRSSCLTFHGVKYGWVKDVFAY
NSTLHGFDVTSTGLDYHYGGDGTVDSGPSQYVWIDGCKATDWIDDGFTTHHSEYITISNCYAYEPNSRGNANGIEIDDGS
RHVLLSNNYSMGCYGGIEIKAHANSSAANNVHILGHISREDTRSYNFRHIGHHTGDDPDSKTAYHITATNLVSLHPNKKR
GFQNNTDPRALVISAYTNVSITNFTAIGDLSYDFGNTPVIAIQYKAKNVSLNGINVSRFHNASDAIIVFGGGNRGDHISL
SNIHIYDAGKNNGIYVGSGHSNVSISNVNAINSKGEGENAVEAATNSVNISGVSVTGYKDAVRSGGVAYKEPITVIKGGA
RIASSTGATSTEQSIILASTSSPTASASKTMVAASSNSHAVGEGAIVLGSAGNSRAQGPRSGILSSSGAVAGQSGGAFSS
MVLASNLVANPNGYSVVGGYGASGNPSSANIKWELNSRTGTVRAAGTLSSAQTFTDYAEYFESIDGNPIATGLLVTLDGD
KIRVAEEGDDILGAISETAGVVLGESALYWQGRYLTNEFGGMVYEPQTIRTYDVDEDGNTLPTYTEEVVELPLENPQYDP
SLPYTPRSKRQEWNIVGLTGQIHVRVSDSVQPGDYVKANGGIGVPGENGPIKVMRLTKAYDEDKGYGIALCFIK

Sequences:

>Translated_794_residues
MKNDEWETCEAKEEDKAFEHLTKTLQQIEDERVVYIDDFIPEGEEESDQTKYFEEALGDGNVKLILGPKRYYATVKLPSR
TVLEGQGMELTTIQTPNHAPSYEWTVSVKDKDNGAEYIAVRHLSLDGNRRRGVEPAGGSRSSCLTFHGVKYGWVKDVFAY
NSTLHGFDVTSTGLDYHYGGDGTVDSGPSQYVWIDGCKATDWIDDGFTTHHSEYITISNCYAYEPNSRGNANGIEIDDGS
RHVLLSNNYSMGCYGGIEIKAHANSSAANNVHILGHISREDTRSYNFRHIGHHTGDDPDSKTAYHITATNLVSLHPNKKR
GFQNNTDPRALVISAYTNVSITNFTAIGDLSYDFGNTPVIAIQYKAKNVSLNGINVSRFHNASDAIIVFGGGNRGDHISL
SNIHIYDAGKNNGIYVGSGHSNVSISNVNAINSKGEGENAVEAATNSVNISGVSVTGYKDAVRSGGVAYKEPITVIKGGA
RIASSTGATSTEQSIILASTSSPTASASKTMVAASSNSHAVGEGAIVLGSAGNSRAQGPRSGILSSSGAVAGQSGGAFSS
MVLASNLVANPNGYSVVGGYGASGNPSSANIKWELNSRTGTVRAAGTLSSAQTFTDYAEYFESIDGNPIATGLLVTLDGD
KIRVAEEGDDILGAISETAGVVLGESALYWQGRYLTNEFGGMVYEPQTIRTYDVDEDGNTLPTYTEEVVELPLENPQYDP
SLPYTPRSKRQEWNIVGLTGQIHVRVSDSVQPGDYVKANGGIGVPGENGPIKVMRLTKAYDEDKGYGIALCFIK
>Mature_794_residues
MKNDEWETCEAKEEDKAFEHLTKTLQQIEDERVVYIDDFIPEGEEESDQTKYFEEALGDGNVKLILGPKRYYATVKLPSR
TVLEGQGMELTTIQTPNHAPSYEWTVSVKDKDNGAEYIAVRHLSLDGNRRRGVEPAGGSRSSCLTFHGVKYGWVKDVFAY
NSTLHGFDVTSTGLDYHYGGDGTVDSGPSQYVWIDGCKATDWIDDGFTTHHSEYITISNCYAYEPNSRGNANGIEIDDGS
RHVLLSNNYSMGCYGGIEIKAHANSSAANNVHILGHISREDTRSYNFRHIGHHTGDDPDSKTAYHITATNLVSLHPNKKR
GFQNNTDPRALVISAYTNVSITNFTAIGDLSYDFGNTPVIAIQYKAKNVSLNGINVSRFHNASDAIIVFGGGNRGDHISL
SNIHIYDAGKNNGIYVGSGHSNVSISNVNAINSKGEGENAVEAATNSVNISGVSVTGYKDAVRSGGVAYKEPITVIKGGA
RIASSTGATSTEQSIILASTSSPTASASKTMVAASSNSHAVGEGAIVLGSAGNSRAQGPRSGILSSSGAVAGQSGGAFSS
MVLASNLVANPNGYSVVGGYGASGNPSSANIKWELNSRTGTVRAAGTLSSAQTFTDYAEYFESIDGNPIATGLLVTLDGD
KIRVAEEGDDILGAISETAGVVLGESALYWQGRYLTNEFGGMVYEPQTIRTYDVDEDGNTLPTYTEEVVELPLENPQYDP
SLPYTPRSKRQEWNIVGLTGQIHVRVSDSVQPGDYVKANGGIGVPGENGPIKVMRLTKAYDEDKGYGIALCFIK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 6 PbH1 repeats [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021865
- InterPro:   IPR006626
- InterPro:   IPR012334
- InterPro:   IPR011050 [H]

Pfam domain/function: PF11962 DUF3476 [H]

EC number: NA

Molecular weight: Translated: 84998; Mature: 84998

Theoretical pI: Translated: 5.05; Mature: 5.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNDEWETCEAKEEDKAFEHLTKTLQQIEDERVVYIDDFIPEGEEESDQTKYFEEALGDG
CCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHCCC
NVKLILGPKRYYATVKLPSRTVLEGQGMELTTIQTPNHAPSYEWTVSVKDKDNGAEYIAV
CEEEEECCCEEEEEEECCCCEEECCCCCEEEEEECCCCCCCEEEEEEEEECCCCCEEEEE
RHLSLDGNRRRGVEPAGGSRSSCLTFHGVKYGWVKDVFAYNSTLHGFDVTSTGLDYHYGG
EEEECCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHCCEECCCEEECCCCCEEECC
DGTVDSGPSQYVWIDGCKATDWIDDGFTTHHSEYITISNCYAYEPNSRGNANGIEIDDGS
CCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCEEECCCC
RHVLLSNNYSMGCYGGIEIKAHANSSAANNVHILGHISREDTRSYNFRHIGHHTGDDPDS
CEEEEECCCCEEEEECEEEEEECCCCCCCCEEEEEEECCCCCCCCCEEECCCCCCCCCCC
KTAYHITATNLVSLHPNKKRGFQNNTDPRALVISAYTNVSITNFTAIGDLSYDFGNTPVI
CEEEEEEEEEEEEECCCHHCCCCCCCCCCEEEEEEECCEEEEEEEEEECEEECCCCCCEE
AIQYKAKNVSLNGINVSRFHNASDAIIVFGGGNRGDHISLSNIHIYDAGKNNGIYVGSGH
EEEEEECEEEECCEEEEHCCCCCCEEEEEECCCCCCEEEEEEEEEEECCCCCCEEEECCC
SNVSISNVNAINSKGEGENAVEAATNSVNISGVSVTGYKDAVRSGGVAYKEPITVIKGGA
CCEEEEEEEEECCCCCCCHHHHHCCCEEEEEEEEECCHHHHHHCCCEEEECCEEEEECCC
RIASSTGATSTEQSIILASTSSPTASASKTMVAASSNSHAVGEGAIVLGSAGNSRAQGPR
EEECCCCCCCCCCEEEEEECCCCCCCCCEEEEEECCCCCCCCCCEEEEECCCCCCCCCCC
SGILSSSGAVAGQSGGAFSSMVLASNLVANPNGYSVVGGYGASGNPSSANIKWELNSRTG
CCCCCCCCCCCCCCCCCHHHHHHHHHEEECCCCCEEEEECCCCCCCCCCEEEEEECCCCC
TVRAAGTLSSAQTFTDYAEYFESIDGNPIATGLLVTLDGDKIRVAEEGDDILGAISETAG
EEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEEEEEECCCEEEEECCCCHHHHHHHHCCC
VVLGESALYWQGRYLTNEFGGMVYEPQTIRTYDVDEDGNTLPTYTEEVVELPLENPQYDP
EEEECCEEEEECEEEEHHHCCEEECCCEEEEEECCCCCCCCCCHHHHHHCCCCCCCCCCC
SLPYTPRSKRQEWNIVGLTGQIHVRVSDSVQPGDYVKANGGIGVPGENGPIKVMRLTKAY
CCCCCCCCCCCCEEEEEEEEEEEEEECCCCCCCCEEEECCCCCCCCCCCCEEEEEEEECC
DEDKGYGIALCFIK
CCCCCCEEEEEEEC
>Mature Secondary Structure
MKNDEWETCEAKEEDKAFEHLTKTLQQIEDERVVYIDDFIPEGEEESDQTKYFEEALGDG
CCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHCCC
NVKLILGPKRYYATVKLPSRTVLEGQGMELTTIQTPNHAPSYEWTVSVKDKDNGAEYIAV
CEEEEECCCEEEEEEECCCCEEECCCCCEEEEEECCCCCCCEEEEEEEEECCCCCEEEEE
RHLSLDGNRRRGVEPAGGSRSSCLTFHGVKYGWVKDVFAYNSTLHGFDVTSTGLDYHYGG
EEEECCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHCCEECCCEEECCCCCEEECC
DGTVDSGPSQYVWIDGCKATDWIDDGFTTHHSEYITISNCYAYEPNSRGNANGIEIDDGS
CCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCEEECCCC
RHVLLSNNYSMGCYGGIEIKAHANSSAANNVHILGHISREDTRSYNFRHIGHHTGDDPDS
CEEEEECCCCEEEEECEEEEEECCCCCCCCEEEEEEECCCCCCCCCEEECCCCCCCCCCC
KTAYHITATNLVSLHPNKKRGFQNNTDPRALVISAYTNVSITNFTAIGDLSYDFGNTPVI
CEEEEEEEEEEEEECCCHHCCCCCCCCCCEEEEEEECCEEEEEEEEEECEEECCCCCCEE
AIQYKAKNVSLNGINVSRFHNASDAIIVFGGGNRGDHISLSNIHIYDAGKNNGIYVGSGH
EEEEEECEEEECCEEEEHCCCCCCEEEEEECCCCCCEEEEEEEEEEECCCCCCEEEECCC
SNVSISNVNAINSKGEGENAVEAATNSVNISGVSVTGYKDAVRSGGVAYKEPITVIKGGA
CCEEEEEEEEECCCCCCCHHHHHCCCEEEEEEEEECCHHHHHHCCCEEEECCEEEEECCC
RIASSTGATSTEQSIILASTSSPTASASKTMVAASSNSHAVGEGAIVLGSAGNSRAQGPR
EEECCCCCCCCCCEEEEEECCCCCCCCCEEEEEECCCCCCCCCCEEEEECCCCCCCCCCC
SGILSSSGAVAGQSGGAFSSMVLASNLVANPNGYSVVGGYGASGNPSSANIKWELNSRTG
CCCCCCCCCCCCCCCCCHHHHHHHHHEEECCCCCEEEEECCCCCCCCCCEEEEEECCCCC
TVRAAGTLSSAQTFTDYAEYFESIDGNPIATGLLVTLDGDKIRVAEEGDDILGAISETAG
EEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEEEEEECCCEEEEECCCCHHHHHHHHCCC
VVLGESALYWQGRYLTNEFGGMVYEPQTIRTYDVDEDGNTLPTYTEEVVELPLENPQYDP
EEEECCEEEEECEEEEHHHCCEEECCCEEEEEECCCCCCCCCCHHHHHHCCCCCCCCCCC
SLPYTPRSKRQEWNIVGLTGQIHVRVSDSVQPGDYVKANGGIGVPGENGPIKVMRLTKAY
CCCCCCCCCCCCEEEEEEEEEEEEEECCCCCCCCEEEECCCCCCCCCCCCEEEEEEEECC
DEDKGYGIALCFIK
CCCCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]