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The map label for this gene is 56963068

Identifier: 56963068

GI number: 56963068

Start: 1418041

End: 1418820

Strand: Direct

Name: 56963068

Synonym: ABC1296

Alternate gene names: NA

Gene position: 1418041-1418820 (Clockwise)

Preceding gene: 56963065

Following gene: 56963072

Centisome position: 32.95

GC content: 45.13

Gene sequence:

>780_bases
ATGAAAAATGCAATTTGTTTACTGCTTTCGCTTTCGATTATCATTGGGCAAACTTCATTGGCGCTCGGGTACGAAAACAA
AACGTACAATTGGAGTTACAAACCAGCTCCAGCCCACACGCCAGCAGATACAGAACCAATGTACAAAGAGCTGTTAGAGA
AAGCGGATGGCTACTTTATCGGCGATCGTGACAGCAAGTCTTTATATTTAACGTTTGACAACGGGTATGAGAACGGCTAT
ACCGAAAAAGTCCTTGATGTGTTAAAAGAAAAACAGGTTACTGGCGCTTTTTTTGTAACAGGCCATTATTTAAAAACAGC
GCCAGAGCTTGTGAAGCGCATGGTGGCGGAAGGGCACATTGTCGGCAACCATTCATACCACCATCCGAGTTTGCCACAAA
CAAGCGATGCCAAGCTAGCGGCTGAACTCGATGACGTGAAAACATTGTTTACTGAAATAACAGGTGAGACGGAGATGCGC
TATTTACGGCCGCCAAGAGGGGAATTTAGTGAGCGTACGCTCATGAAATCAAAGGAGCTTGGCTATACGAATGTATTTTG
GTCCCTTGCCTATAAAGATTGGGAAGTCGATAAACAAAAGGGTGGAAAGTATGCCTACGACCAAGTAATGAAACGAATCC
ACCCTGGAGCGATTATGTTAATCCACGCCGTATCGCCTGATAACGCCGAAGCATTGCCTGATATTATTGATGAATGCCGG
CGCCAAGGCTACACGTTCCGCAGTTTAGACGAATTGTCGTTACATTCTCCCATGCCTTAG

Upstream 100 bases:

>100_bases
TAATGAAACCATAGCCCATTAAAACATGCAACAAAAAAGAACGAATAAAAGCCTTTCTGCTGACGGAAGCTACGAATAAA
CACATGAAAGGGAGAAACGT

Downstream 100 bases:

>100_bases
TGTGTACCGCTCAATTAACGTTTGGTGCAAAAGTAGTTCAGCCTGTTGGCAAAATCTCGGTAAAACCGAGACAGTCGACA
GGCTTTTTTGTACAATTAAA

Product: polysaccharide deacetylase

Products: NA

Alternate protein names: ORF2 [H]

Number of amino acids: Translated: 259; Mature: 259

Protein sequence:

>259_residues
MKNAICLLLSLSIIIGQTSLALGYENKTYNWSYKPAPAHTPADTEPMYKELLEKADGYFIGDRDSKSLYLTFDNGYENGY
TEKVLDVLKEKQVTGAFFVTGHYLKTAPELVKRMVAEGHIVGNHSYHHPSLPQTSDAKLAAELDDVKTLFTEITGETEMR
YLRPPRGEFSERTLMKSKELGYTNVFWSLAYKDWEVDKQKGGKYAYDQVMKRIHPGAIMLIHAVSPDNAEALPDIIDECR
RQGYTFRSLDELSLHSPMP

Sequences:

>Translated_259_residues
MKNAICLLLSLSIIIGQTSLALGYENKTYNWSYKPAPAHTPADTEPMYKELLEKADGYFIGDRDSKSLYLTFDNGYENGY
TEKVLDVLKEKQVTGAFFVTGHYLKTAPELVKRMVAEGHIVGNHSYHHPSLPQTSDAKLAAELDDVKTLFTEITGETEMR
YLRPPRGEFSERTLMKSKELGYTNVFWSLAYKDWEVDKQKGGKYAYDQVMKRIHPGAIMLIHAVSPDNAEALPDIIDECR
RQGYTFRSLDELSLHSPMP
>Mature_259_residues
MKNAICLLLSLSIIIGQTSLALGYENKTYNWSYKPAPAHTPADTEPMYKELLEKADGYFIGDRDSKSLYLTFDNGYENGY
TEKVLDVLKEKQVTGAFFVTGHYLKTAPELVKRMVAEGHIVGNHSYHHPSLPQTSDAKLAAELDDVKTLFTEITGETEMR
YLRPPRGEFSERTLMKSKELGYTNVFWSLAYKDWEVDKQKGGKYAYDQVMKRIHPGAIMLIHAVSPDNAEALPDIIDECR
RQGYTFRSLDELSLHSPMP

Specific function: Unknown

COG id: COG0726

COG function: function code G; Predicted xylanase/chitin deacetylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polysaccharide deacetylase family [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6323339, Length=129, Percent_Identity=31.0077519379845, Blast_Score=70, Evalue=3e-13,
Organism=Saccharomyces cerevisiae, GI6323338, Length=141, Percent_Identity=26.241134751773, Blast_Score=67, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011330
- InterPro:   IPR002509
- InterPro:   IPR014235 [H]

Pfam domain/function: PF01522 Polysacc_deac_1 [H]

EC number: NA

Molecular weight: Translated: 29410; Mature: 29410

Theoretical pI: Translated: 6.24; Mature: 6.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNAICLLLSLSIIIGQTSLALGYENKTYNWSYKPAPAHTPADTEPMYKELLEKADGYFI
CCCHHHHHHHHHHHHCCHHEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCEEE
GDRDSKSLYLTFDNGYENGYTEKVLDVLKEKQVTGAFFVTGHYLKTAPELVKRMVAEGHI
ECCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHCCEE
VGNHSYHHPSLPQTSDAKLAAELDDVKTLFTEITGETEMRYLRPPRGEFSERTLMKSKEL
ECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCHHHHHHHHHHCC
GYTNVFWSLAYKDWEVDKQKGGKYAYDQVMKRIHPGAIMLIHAVSPDNAEALPDIIDECR
CCHHHEEEEHHCCCCCHHHCCCCHHHHHHHHHHCCCEEEEEEEECCCCHHHHHHHHHHHH
RQGYTFRSLDELSLHSPMP
HCCCCCCCHHHHCCCCCCC
>Mature Secondary Structure
MKNAICLLLSLSIIIGQTSLALGYENKTYNWSYKPAPAHTPADTEPMYKELLEKADGYFI
CCCHHHHHHHHHHHHCCHHEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCEEE
GDRDSKSLYLTFDNGYENGYTEKVLDVLKEKQVTGAFFVTGHYLKTAPELVKRMVAEGHI
ECCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHCCEE
VGNHSYHHPSLPQTSDAKLAAELDDVKTLFTEITGETEMRYLRPPRGEFSERTLMKSKEL
ECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCHHHHHHHHHHCC
GYTNVFWSLAYKDWEVDKQKGGKYAYDQVMKRIHPGAIMLIHAVSPDNAEALPDIIDECR
CCHHHEEEEHHCCCCCHHHCCCCHHHHHHHHHHCCCEEEEEEEECCCCHHHHHHHHHHHH
RQGYTFRSLDELSLHSPMP
HCCCCCCCHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8473853 [H]