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The map label for this gene is tnpA1 [H]

Identifier: 56963053

GI number: 56963053

Start: 1402934

End: 1403464

Strand: Direct

Name: tnpA1 [H]

Synonym: ABC1281

Alternate gene names: 56963053

Gene position: 1402934-1403464 (Clockwise)

Preceding gene: 56963052

Following gene: 56963054

Centisome position: 32.6

GC content: 38.79

Gene sequence:

>531_bases
GTGATGAAAAAATCTCCAATCGTTATAATAGAACTTGGCCGCCAAACCAACTTCTATCAACGAAAGGAGATCTCACCCAT
GAGTGACAACAGTTTATCACACACAAGATGGAATTGTAAGTATCATATCGTGTTTATCCCTAAGTATAGACGAAAGATTG
TCTATGGGAAGCTGCGAAAAGATATTGGAGCTATTTTGAGAAGGTTATGTGAAATGAAAGATGTAGAAATTATCGAAGCC
CATGCGATGATTGATCACATACACATGCTGGTGAAAATTCCGCCAAAAATGTCGGTATCGTATTTCATGGGGTATTTGAA
AGGGAAAAGTTCGTTGATGATCCATGATCGTCACGCAAACTTAAAATACAACCATGGAAATCGCACGTTTTGGGCAAAAG
GCTATTACGTGAGTACAGTAGGACTAAATCAAAAAACAATTGAAAAATACATCCGCGAACAAGAAGCGGAGGATCGATTG
CGCGATCAAATGACAAAGAGGGAGTACGTCGACCCATTTAAAGATAAGTAA

Upstream 100 bases:

>100_bases
AGAGGACGGAAGCTGACCGGGGCAGCTTCCGTTTTTTATTAATATGGGTTTGAAACCACGTGCTCTGCACGTGTGAAAAC
GAAACTTCTAGAGAGGTCTA

Downstream 100 bases:

>100_bases
AGTAGGAAACGGTTGGCGGTCCCTTCAGAGGTCCCTTTAGGGACTTCGTTGGTAAAGTGCCCTTATAGGGCGAAATTAAA
ACCGCCGGTTCTACCGGCGG

Product: IS605/IS200 family transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 176; Mature: 176

Protein sequence:

>176_residues
MMKKSPIVIIELGRQTNFYQRKEISPMSDNSLSHTRWNCKYHIVFIPKYRRKIVYGKLRKDIGAILRRLCEMKDVEIIEA
HAMIDHIHMLVKIPPKMSVSYFMGYLKGKSSLMIHDRHANLKYNHGNRTFWAKGYYVSTVGLNQKTIEKYIREQEAEDRL
RDQMTKREYVDPFKDK

Sequences:

>Translated_176_residues
MMKKSPIVIIELGRQTNFYQRKEISPMSDNSLSHTRWNCKYHIVFIPKYRRKIVYGKLRKDIGAILRRLCEMKDVEIIEA
HAMIDHIHMLVKIPPKMSVSYFMGYLKGKSSLMIHDRHANLKYNHGNRTFWAKGYYVSTVGLNQKTIEKYIREQEAEDRL
RDQMTKREYVDPFKDK
>Mature_176_residues
MMKKSPIVIIELGRQTNFYQRKEISPMSDNSLSHTRWNCKYHIVFIPKYRRKIVYGKLRKDIGAILRRLCEMKDVEIIEA
HAMIDHIHMLVKIPPKMSVSYFMGYLKGKSSLMIHDRHANLKYNHGNRTFWAKGYYVSTVGLNQKTIEKYIREQEAEDRL
RDQMTKREYVDPFKDK

Specific function: Involved in the transposition of the insertion sequence [H]

COG id: COG1943

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 17 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002686 [H]

Pfam domain/function: PF01797 Transposase_17 [H]

EC number: NA

Molecular weight: Translated: 21057; Mature: 21057

Theoretical pI: Translated: 10.33; Mature: 10.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
5.7 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
5.7 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMKKSPIVIIELGRQTNFYQRKEISPMSDNSLSHTRWNCKYHIVFIPKYRRKIVYGKLRK
CCCCCCEEEEEECCCCCCHHHCCCCCCCCCCCCCEEECEEEEEEECCCHHHHHHHHHHHH
DIGAILRRLCEMKDVEIIEAHAMIDHIHMLVKIPPKMSVSYFMGYLKGKSSLMIHDRHAN
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHCCCCEEEEEECCCC
LKYNHGNRTFWAKGYYVSTVGLNQKTIEKYIREQEAEDRLRDQMTKREYVDPFKDK
EEEECCCEEEEECCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MMKKSPIVIIELGRQTNFYQRKEISPMSDNSLSHTRWNCKYHIVFIPKYRRKIVYGKLRK
CCCCCCEEEEEECCCCCCHHHCCCCCCCCCCCCCEEECEEEEEEECCCHHHHHHHHHHHH
DIGAILRRLCEMKDVEIIEAHAMIDHIHMLVKIPPKMSVSYFMGYLKGKSSLMIHDRHAN
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHCCCCEEEEEECCCC
LKYNHGNRTFWAKGYYVSTVGLNQKTIEKYIREQEAEDRLRDQMTKREYVDPFKDK
EEEECCCEEEEECCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11677608; 12644504 [H]