Click here to switch to the map view.

The map label for this gene is rhbE [H]

Identifier: 56963052

GI number: 56963052

Start: 1401545

End: 1402849

Strand: Direct

Name: rhbE [H]

Synonym: ABC1280

Alternate gene names: 56963052

Gene position: 1401545-1402849 (Clockwise)

Preceding gene: 56963051

Following gene: 56963053

Centisome position: 32.56

GC content: 44.14

Gene sequence:

>1305_bases
ATGGAGGATATGTTTGACGTTGTTGGTGTAGGGATTGGTCCGTATAATTTAGGGCTGGCAGCAATGATAGCAGAAAGCAC
CGATATCAAAGCAGCCTTTTTTGATGAAAATGATGTCTTTTTGTGGCATCCTGGCATGCTGCTTGATGGAACCGACCTTC
AGGTTCCTTTTTTAGCGGATTTAATAACGTTGGCTAATCCGCAGAGCCGCTACACATTTTTAAATTATGCTCATGCGGAA
AAAAGGCTGATGTCCTTTTATTTTTTCAACCGCTTTGACATTCCAAGAATGGAGTACAATGCCTATTGTCAATGGGTGGC
AGGGCAACTAAGCAACTGCCATTTTGGCACAAAGGTGTTGGAGGTTCAGTATGAAGCGGAGAAAGAAGCATATCGAGTCG
TGCTATTAGCGGCTGGAATAGAAAAAACGGTTTATGCAACCCATATCGTTGTTGGTACTGGTAGTGTGCCGCTCCTTCCA
GGCAGCTTAGAAAAAGCATGCAACGAAGACATCATCCATTCAAGCGACTATCGCTTTTATGAAAAAGACATAAAGGAAGC
ACGGTCGGTAACGGTAATCGGTTCAGGGCAGAGCGCTGCTGAAATTTTTTACTCCCTTTTACAGAACCAACCGAATCACC
ATTACACCCTTAACTGGTTTACAAGATCGCCAGGCTTTTTCCAACTAGAAGAATCAAAGATCGGGCAAGAGCTTTTTTCG
CCAGATTTTGTTTCTTATTTTCATGAACTTCCCTATGAAACAAGGAAGGACACCCTTTCACTGCTCGGGCATTTGCGCAA
TGGCGTGCAAGCTAAAACACTCCACAACATTTATGACCTATTGTACCACCGCAGCATTGCCAAAAAAGCTTCTCCTGCTT
TAATACGCGCCAATATGGAAGTGACAACGATTGAGAAAAAGGGACCGCGGAGCTATCAAGTGATCGGAGAACAAACACAA
CAAAGGCAGACGTTTGCCTACCAGACAGAAAAAGTCATTTTAGCAACAGGCTATAAGCCGAATGTCCCCCGCTGGTTGGA
AGCAATGCAGACTGAGCTGGAAATGGAAGGCGAAAGTGAGTTTAAACTAACACGTAATGCAGAACTCCTTTTTAAAGATG
CGCGCAAAAACCGGATGTTTTCCTTAACGAATGTCGAACATGCGTTAGGGACAAGTGCTACCAATCTCGCTTTATCGGTT
GAACGGAACGCACGGATTGTAAATGAACTATGTGGCAATGAGGTATTCCAAGTAAGCCCAGGGTCTGTTTTTCAACAGTT
TGGCAATGAAGAGGACGGAAGCTGA

Upstream 100 bases:

>100_bases
GTTAAAGCAATCGACAACATTTGATGTGCCATTTCGTTACAAACAAGGGAAAATCGCAAATACATTTATTCGTAATATCT
GCAAATAGGAGTGGATCGAA

Downstream 100 bases:

>100_bases
CCGGGGCAGCTTCCGTTTTTTATTAATATGGGTTTGAAACCACGTGCTCTGCACGTGTGAAAACGAAACTTCTAGAGAGG
TCTAGTGATGAAAAAATCTC

Product: lysine/ornithine N-monooxygenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 434; Mature: 434

Protein sequence:

>434_residues
MEDMFDVVGVGIGPYNLGLAAMIAESTDIKAAFFDENDVFLWHPGMLLDGTDLQVPFLADLITLANPQSRYTFLNYAHAE
KRLMSFYFFNRFDIPRMEYNAYCQWVAGQLSNCHFGTKVLEVQYEAEKEAYRVVLLAAGIEKTVYATHIVVGTGSVPLLP
GSLEKACNEDIIHSSDYRFYEKDIKEARSVTVIGSGQSAAEIFYSLLQNQPNHHYTLNWFTRSPGFFQLEESKIGQELFS
PDFVSYFHELPYETRKDTLSLLGHLRNGVQAKTLHNIYDLLYHRSIAKKASPALIRANMEVTTIEKKGPRSYQVIGEQTQ
QRQTFAYQTEKVILATGYKPNVPRWLEAMQTELEMEGESEFKLTRNAELLFKDARKNRMFSLTNVEHALGTSATNLALSV
ERNARIVNELCGNEVFQVSPGSVFQQFGNEEDGS

Sequences:

>Translated_434_residues
MEDMFDVVGVGIGPYNLGLAAMIAESTDIKAAFFDENDVFLWHPGMLLDGTDLQVPFLADLITLANPQSRYTFLNYAHAE
KRLMSFYFFNRFDIPRMEYNAYCQWVAGQLSNCHFGTKVLEVQYEAEKEAYRVVLLAAGIEKTVYATHIVVGTGSVPLLP
GSLEKACNEDIIHSSDYRFYEKDIKEARSVTVIGSGQSAAEIFYSLLQNQPNHHYTLNWFTRSPGFFQLEESKIGQELFS
PDFVSYFHELPYETRKDTLSLLGHLRNGVQAKTLHNIYDLLYHRSIAKKASPALIRANMEVTTIEKKGPRSYQVIGEQTQ
QRQTFAYQTEKVILATGYKPNVPRWLEAMQTELEMEGESEFKLTRNAELLFKDARKNRMFSLTNVEHALGTSATNLALSV
ERNARIVNELCGNEVFQVSPGSVFQQFGNEEDGS
>Mature_434_residues
MEDMFDVVGVGIGPYNLGLAAMIAESTDIKAAFFDENDVFLWHPGMLLDGTDLQVPFLADLITLANPQSRYTFLNYAHAE
KRLMSFYFFNRFDIPRMEYNAYCQWVAGQLSNCHFGTKVLEVQYEAEKEAYRVVLLAAGIEKTVYATHIVVGTGSVPLLP
GSLEKACNEDIIHSSDYRFYEKDIKEARSVTVIGSGQSAAEIFYSLLQNQPNHHYTLNWFTRSPGFFQLEESKIGQELFS
PDFVSYFHELPYETRKDTLSLLGHLRNGVQAKTLHNIYDLLYHRSIAKKASPALIRANMEVTTIEKKGPRSYQVIGEQTQ
QRQTFAYQTEKVILATGYKPNVPRWLEAMQTELEMEGESEFKLTRNAELLFKDARKNRMFSLTNVEHALGTSATNLALSV
ERNARIVNELCGNEVFQVSPGSVFQQFGNEEDGS

Specific function: Unknown

COG id: COG3486

COG function: function code Q; Lysine/ornithine N-monooxygenase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the lysine N(6)-hydroxylase/L-ornithine N(5)-oxygenase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49254; Mature: 49254

Theoretical pI: Translated: 5.32; Mature: 5.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEDMFDVVGVGIGPYNLGLAAMIAESTDIKAAFFDENDVFLWHPGMLLDGTDLQVPFLAD
CCCHHHHHHCCCCCHHHCHHHEEECCCCCEEEEECCCCEEEECCCEEECCCCCCCHHHHH
LITLANPQSRYTFLNYAHAEKRLMSFYFFNRFDIPRMEYNAYCQWVAGQLSNCHFGTKVL
HHHHCCCCCCEEEEEHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCEEE
EVQYEAEKEAYRVVLLAAGIEKTVYATHIVVGTGSVPLLPGSLEKACNEDIIHSSDYRFY
EEEECCCCCCEEEEEEECCCCCEEEEEEEEEECCCCCCCCCHHHHHCCCCCCCCCCCHHH
EKDIKEARSVTVIGSGQSAAEIFYSLLQNQPNHHYTLNWFTRSPGFFQLEESKIGQELFS
HHHHHHHCEEEEEECCCHHHHHHHHHHHCCCCCEEEEEEEECCCCEEEEHHHHHHHHHCC
PDFVSYFHELPYETRKDTLSLLGHLRNGVQAKTLHNIYDLLYHRSIAKKASPALIRANME
CHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCE
VTTIEKKGPRSYQVIGEQTQQRQTFAYQTEKVILATGYKPNVPRWLEAMQTELEMEGESE
EEEEECCCCCCEEHHCHHHHHHHHHHEECCEEEEEECCCCCCHHHHHHHHHHHHCCCCCC
FKLTRNAELLFKDARKNRMFSLTNVEHALGTSATNLALSVERNARIVNELCGNEVFQVSP
EEEECCHHHHHHHHHCCCEEEECCHHHHHCCCCCEEEEEECCCHHHHHHHHCCCEEEECC
GSVFQQFGNEEDGS
HHHHHHCCCCCCCC
>Mature Secondary Structure
MEDMFDVVGVGIGPYNLGLAAMIAESTDIKAAFFDENDVFLWHPGMLLDGTDLQVPFLAD
CCCHHHHHHCCCCCHHHCHHHEEECCCCCEEEEECCCCEEEECCCEEECCCCCCCHHHHH
LITLANPQSRYTFLNYAHAEKRLMSFYFFNRFDIPRMEYNAYCQWVAGQLSNCHFGTKVL
HHHHCCCCCCEEEEEHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCEEE
EVQYEAEKEAYRVVLLAAGIEKTVYATHIVVGTGSVPLLPGSLEKACNEDIIHSSDYRFY
EEEECCCCCCEEEEEEECCCCCEEEEEEEEEECCCCCCCCCHHHHHCCCCCCCCCCCHHH
EKDIKEARSVTVIGSGQSAAEIFYSLLQNQPNHHYTLNWFTRSPGFFQLEESKIGQELFS
HHHHHHHCEEEEEECCCHHHHHHHHHHHCCCCCEEEEEEEECCCCEEEEHHHHHHHHHCC
PDFVSYFHELPYETRKDTLSLLGHLRNGVQAKTLHNIYDLLYHRSIAKKASPALIRANME
CHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCE
VTTIEKKGPRSYQVIGEQTQQRQTFAYQTEKVILATGYKPNVPRWLEAMQTELEMEGESE
EEEEECCCCCCEEHHCHHHHHHHHHHEECCEEEEEECCCCCCHHHHHHHHHHHHCCCCCC
FKLTRNAELLFKDARKNRMFSLTNVEHALGTSATNLALSVERNARIVNELCGNEVFQVSP
EEEECCHHHHHHHHHCCCEEEECCHHHHHCCCCCEEEEEECCCHHHHHHHHCCCEEEECC
GSVFQQFGNEEDGS
HHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11274118; 11481432 [H]