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The map label for this gene is rsmI [H]

Identifier: 55981932

GI number: 55981932

Start: 1839205

End: 1839999

Strand: Reverse

Name: rsmI [H]

Synonym: TTHA1963

Alternate gene names: 55981932

Gene position: 1839999-1839205 (Counterclockwise)

Preceding gene: 55981933

Following gene: 55981931

Centisome position: 99.47

GC content: 70.69

Gene sequence:

>795_bases
GTGCGGCTGGTCTTGGTCCCCACGCCCATCGGCAACCTGGAGGACATCACCTTGAGGGCCCTCCGCGTCCTCAAGGAGGT
GGAGGTGGTGGCCTGCGAGGACACCCGCCGCACCGGGCTCCTCCTCAAGCACTACGGCATTCCCACCCCCACCCTCCGCC
TGGACCAGCACACGGTGGGGCGGGCGCGGGAGCTCCTCGCGCCTTACCGCTACGTGGCCTACGCCACGGACGCCGGCACC
CCCGGGATCTCGGACCCGGGGGCCGAGCTCGTGCGCCTGGCCCTGGAGTGGGGCTGGCGGGTGGAAGCGCTTCCCGGCCC
CACGGCCTTGATCCCCGCCCTGGTGGCCTCCGGCCTGCCCACCCACCGCTTCACCTTTGAGGGGTTCCTGCCGAAGGGGG
GAAGGGAGCGGAGGGAGCGGATCCTGGCCTTGGCCCGGGAGGGGAGGACGGCTGTGCTCTACGAGAGCCCCCACCGCCTG
CGCAAGACCTTGGAGGATCTCCTCGAGGTCTACGGGCCGGATCACCCCGTGGCGGTGGCCCGGGAGCTCAGCAAGCTCCA
CGAGGAGATCTTTCGTGGAAGCCTCCGGGAAGCCTTGGAACATTTCCAGGAGCCCCGGGGGGAGTTCGTCCTCGTCCTGG
GACCCAAGGCCCTGGAGGCCCCAAACGGCGAGGCCCTGGCCCGGAGGCTGAAGGAGGAGGGGCTTTCGGGGAGGGCCTTG
GTCCGGGCCCTCGTGGCCTTGGGCCTTCCCCGGAACGAGGCGTACCGACTGGCCTTGGAGGAGGAAGAGGGATGA

Upstream 100 bases:

>100_bases
GGGGCGCCGGACCTTCTGGAGTTCACCCTGCCCTCGGGCTCCGTCTACGAGTTCCCCTTCCGGGAGGCCCTGGCCCTTCT
TCGCCCCGTGGTGGGCTGAC

Downstream 100 bases:

>100_bases
AACGCATCGGGGTGTTCACCAGCGGCGGCGACGCGCCGGGGATGAACGCGGCCATCCGGGCGGTGGTGCGCCAGGCCCAC
GCCCTGGGGGTGGAGGTCAT

Product: tetrapyrrole methylase family protein

Products: NA

Alternate protein names: 16S rRNA 2'-O-ribose C1402 methyltransferase; rRNA (cytidine-2'-O-)-methyltransferase RsmI [H]

Number of amino acids: Translated: 264; Mature: 264

Protein sequence:

>264_residues
MRLVLVPTPIGNLEDITLRALRVLKEVEVVACEDTRRTGLLLKHYGIPTPTLRLDQHTVGRARELLAPYRYVAYATDAGT
PGISDPGAELVRLALEWGWRVEALPGPTALIPALVASGLPTHRFTFEGFLPKGGRERRERILALAREGRTAVLYESPHRL
RKTLEDLLEVYGPDHPVAVARELSKLHEEIFRGSLREALEHFQEPRGEFVLVLGPKALEAPNGEALARRLKEEGLSGRAL
VRALVALGLPRNEAYRLALEEEEG

Sequences:

>Translated_264_residues
MRLVLVPTPIGNLEDITLRALRVLKEVEVVACEDTRRTGLLLKHYGIPTPTLRLDQHTVGRARELLAPYRYVAYATDAGT
PGISDPGAELVRLALEWGWRVEALPGPTALIPALVASGLPTHRFTFEGFLPKGGRERRERILALAREGRTAVLYESPHRL
RKTLEDLLEVYGPDHPVAVARELSKLHEEIFRGSLREALEHFQEPRGEFVLVLGPKALEAPNGEALARRLKEEGLSGRAL
VRALVALGLPRNEAYRLALEEEEG
>Mature_264_residues
MRLVLVPTPIGNLEDITLRALRVLKEVEVVACEDTRRTGLLLKHYGIPTPTLRLDQHTVGRARELLAPYRYVAYATDAGT
PGISDPGAELVRLALEWGWRVEALPGPTALIPALVASGLPTHRFTFEGFLPKGGRERRERILALAREGRTAVLYESPHRL
RKTLEDLLEVYGPDHPVAVARELSKLHEEIFRGSLREALEHFQEPRGEFVLVLGPKALEAPNGEALARRLKEEGLSGRAL
VRALVALGLPRNEAYRLALEEEEG

Specific function: Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA [H]

COG id: COG0313

COG function: function code R; Predicted methyltransferases

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RsmI family [H]

Homologues:

Organism=Escherichia coli, GI1789535, Length=281, Percent_Identity=43.0604982206406, Blast_Score=181, Evalue=4e-47,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000878
- InterPro:   IPR014777
- InterPro:   IPR014776
- InterPro:   IPR008189
- InterPro:   IPR018063 [H]

Pfam domain/function: PF00590 TP_methylase [H]

EC number: NA

Molecular weight: Translated: 29340; Mature: 29340

Theoretical pI: Translated: 7.24; Mature: 7.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLVLVPTPIGNLEDITLRALRVLKEVEVVACEDTRRTGLLLKHYGIPTPTLRLDQHTVG
CEEEEECCCCCCHHHHHHHHHHHHHHHHHEEECCCCHHCEEHEECCCCCCCEECCCHHHH
RARELLAPYRYVAYATDAGTPGISDPGAELVRLALEWGWRVEALPGPTALIPALVASGLP
HHHHHHCCHHHEEEECCCCCCCCCCHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHCCCC
THRFTFEGFLPKGGRERRERILALAREGRTAVLYESPHRLRKTLEDLLEVYGPDHPVAVA
CCEEEEECCCCCCCHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHCCCCHHHHH
RELSKLHEEIFRGSLREALEHFQEPRGEFVLVLGPKALEAPNGEALARRLKEEGLSGRAL
HHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHCCCCCHHHHHHHHHHCCCCHHHH
VRALVALGLPRNEAYRLALEEEEG
HHHHHHHCCCCCCEEEEEEECCCC
>Mature Secondary Structure
MRLVLVPTPIGNLEDITLRALRVLKEVEVVACEDTRRTGLLLKHYGIPTPTLRLDQHTVG
CEEEEECCCCCCHHHHHHHHHHHHHHHHHEEECCCCHHCEEHEECCCCCCCEECCCHHHH
RARELLAPYRYVAYATDAGTPGISDPGAELVRLALEWGWRVEALPGPTALIPALVASGLP
HHHHHHCCHHHEEEECCCCCCCCCCHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHCCCC
THRFTFEGFLPKGGRERRERILALAREGRTAVLYESPHRLRKTLEDLLEVYGPDHPVAVA
CCEEEEECCCCCCCHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHCCCCHHHHH
RELSKLHEEIFRGSLREALEHFQEPRGEFVLVLGPKALEAPNGEALARRLKEEGLSGRAL
HHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHCCCCCHHHHHHHHHHCCCCHHHH
VRALVALGLPRNEAYRLALEEEEG
HHHHHHHCCCCCCEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]