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The map label for this gene is bedB [H]

Identifier: 55981810

GI number: 55981810

Start: 1726187

End: 1726489

Strand: Direct

Name: bedB [H]

Synonym: TTHA1841

Alternate gene names: 55981810

Gene position: 1726187-1726489 (Clockwise)

Preceding gene: 55981809

Following gene: 55981816

Centisome position: 93.32

GC content: 70.63

Gene sequence:

>303_bases
ATGTGGACCCCCGTGGCCAAGCTCGGCGAGTTCCAAAACGGCCGCCTCGTGGTGAAGCGGCCTGAGCACAGGAAGCCCAT
CCTCCTCCTCTACACGGGGGAGGAGGTCTTCGCCCTGGAGGACGTCTGCACCCACGACGACGGCCCCCTCCACGAGGGGG
AGGTGGAGGACGGGGCCATCGTCTGCCCCCGCCACGGGGCCCGGTTTGACCTGAGGACGGGGCGGCAGACCCTTCCCGCC
CCGAGGCCCGTGAAGGTCTTCCCCGCCCGCCTCGAGGGGGACACCGTCCTCCTGGACCTCTAG

Upstream 100 bases:

>100_bases
TGGTCAAGGCCCACCTCGCGGACGTCCTCTCCCGCATCCCCTTGAAGGCGCTTAGGGCCCACATTGAGGCGGTGATTGAG
GAGAAGGTGCGGATCTAGCC

Downstream 100 bases:

>100_bases
GCCCTGAGAAAGGCCACGTAGCGCTCCAGGAGGAGGTAGGCCTCCCCCGAGGCCAGGACCTCCCGGGCCAGCGCCACCCC
CTCCTTCAGGGAGGGGGTTT

Product: dioxygenase ferredoxin subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 100; Mature: 100

Protein sequence:

>100_residues
MWTPVAKLGEFQNGRLVVKRPEHRKPILLLYTGEEVFALEDVCTHDDGPLHEGEVEDGAIVCPRHGARFDLRTGRQTLPA
PRPVKVFPARLEGDTVLLDL

Sequences:

>Translated_100_residues
MWTPVAKLGEFQNGRLVVKRPEHRKPILLLYTGEEVFALEDVCTHDDGPLHEGEVEDGAIVCPRHGARFDLRTGRQTLPA
PRPVKVFPARLEGDTVLLDL
>Mature_100_residues
MWTPVAKLGEFQNGRLVVKRPEHRKPILLLYTGEEVFALEDVCTHDDGPLHEGEVEDGAIVCPRHGARFDLRTGRQTLPA
PRPVKVFPARLEGDTVLLDL

Specific function: This protein seems to be a 2Fe-2S ferredoxin [H]

COG id: COG2146

COG function: function code PR; Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Rieske domain [H]

Homologues:

Organism=Escherichia coli, GI1788890, Length=76, Percent_Identity=40.7894736842105, Blast_Score=62, Evalue=5e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017941 [H]

Pfam domain/function: PF00355 Rieske [H]

EC number: NA

Molecular weight: Translated: 11208; Mature: 11208

Theoretical pI: Translated: 6.09; Mature: 6.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWTPVAKLGEFQNGRLVVKRPEHRKPILLLYTGEEVFALEDVCTHDDGPLHEGEVEDGAI
CCCCCCCCCCCCCCEEEEECCCCCCCEEEEECCCCEEEEECHHCCCCCCCCCCCCCCCEE
VCPRHGARFDLRTGRQTLPAPRPVKVFPARLEGDTVLLDL
ECCCCCCEEEECCCCCCCCCCCCEEEEEEEECCCEEEEEC
>Mature Secondary Structure
MWTPVAKLGEFQNGRLVVKRPEHRKPILLLYTGEEVFALEDVCTHDDGPLHEGEVEDGAI
CCCCCCCCCCCCCCEEEEECCCCCCCEEEEECCCCEEEEECHHCCCCCCCCCCCCCCCEE
VCPRHGARFDLRTGRQTLPAPRPVKVFPARLEGDTVLLDL
ECCCCCCEEEECCCCCCCCCCCCEEEEEEEECCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8344526 [H]